RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 SPTSSBQ8NFR3 76 aa8.76□□□□□ -1.01
CALD1-204ENST00000417172 SEC61BP60468 96 aaKnown RBP8.74□□□□□ -1.01
CALD1-204ENST00000417172 DMAC1Q96GE9 116 aa8.74□□□□□ -1.01
CALD1-204ENST00000417172 PRR15LQ9BU68 103 aa8.73□□□□□ -1.01
CALD1-204ENST00000417172 KRTAP4-1Q9BYQ7 146 aa8.73□□□□□ -1.01
CALD1-204ENST00000417172 A6NED7 52 aa8.72□□□□□ -1.01
CALD1-204ENST00000417172 KRTAP3-1Q9BYR8 98 aa8.72□□□□□ -1.01
CALD1-204ENST00000417172 MUC17Q685J3 4493 aa8.7□□□□□ -1.02
CALD1-204ENST00000417172 A8MU10 97 aa8.69□□□□□ -1.02
CALD1-204ENST00000417172 COA5Q86WW8 74 aa8.69□□□□□ -1.02
CALD1-204ENST00000417172 ACYP2P14621 99 aa8.65□□□□□ -1.02
CALD1-204ENST00000417172 COX6B2Q6YFQ2 88 aa8.65□□□□□ -1.02
CALD1-204ENST00000417172 MUC2Q02817 5179 aa8.64□□□□□ -1.03
CALD1-204ENST00000417172 H3BS24 57 aa8.63□□□□□ -1.03
CALD1-204ENST00000417172 LINC01558Q9Y6Z2 57 aa8.61□□□□□ -1.03
CALD1-204ENST00000417172 UBR4Q5T4S7 5183 aa8.57□□□□□ -1.04
CALD1-204ENST00000417172 LINC01554Q52M75 96 aa8.54□□□□□ -1.04
CALD1-204ENST00000417172 RNF213Q63HN8 5207 aa8.45□□□□□ -1.06
CALD1-204ENST00000417172 H1FX-AS1Q4G0G2 97 aa8.44□□□□□ -1.06
CALD1-204ENST00000417172 KRTAP19-2Q3LHN2 52 aa8.44□□□□□ -1.06
CALD1-204ENST00000417172 KRTAP3-3Q9BYR6 98 aa8.4□□□□□ -1.06
CALD1-204ENST00000417172 S4R3F8 94 aa8.4□□□□□ -1.06
CALD1-204ENST00000417172 PRAC1Q96KF2 57 aa8.29□□□□□ -1.08
CALD1-204ENST00000417172 FLGP20930 4061 aaPredicted RBP8.26□□□□□ -1.09
CALD1-204ENST00000417172 FAT4Q6V0I7 4981 aa8.26□□□□□ -1.09
CALD1-204ENST00000417172 LCE2CQ5TA81 110 aa8.26□□□□□ -1.09
CALD1-204ENST00000417172 SPATA8Q6RVD6 105 aa8.21□□□□□ -1.1
CALD1-204ENST00000417172 A0A1B0GU69 56 aa8.19□□□□□ -1.1
CALD1-204ENST00000417172 CSAG1Q6PB30 78 aa8.17□□□□□ -1.1
CALD1-204ENST00000417172 ADM2Q7Z4H4 148 aa8.15□□□□□ -1.1
CALD1-204ENST00000417172 KRTAP3-2Q9BYR7 98 aa8.09□□□□□ -1.11
CALD1-204ENST00000417172 MT1HP80294 61 aa8.08□□□□□ -1.12
CALD1-204ENST00000417172 UQCR11O14957 56 aa8.07□□□□□ -1.12
CALD1-204ENST00000417172 KRTAP10-6P60371 365 aaPredicted RBP8.07□□□□□ -1.12
CALD1-204ENST00000417172 P0C880 135 aa8.05□□□□□ -1.12
CALD1-204ENST00000417172 MIR22HGQ0VDD5 57 aa8.05□□□□□ -1.12
CALD1-204ENST00000417172 M0R2T5 61 aa7.99□□□□□ -1.13
CALD1-204ENST00000417172 H0YAA0 97 aa7.95□□□□□ -1.14
CALD1-204ENST00000417172 ROMO1P60602 79 aa7.95□□□□□ -1.14
CALD1-204ENST00000417172 A0A1B0GU33 70 aa7.95□□□□□ -1.14
CALD1-204ENST00000417172 LORP23490 312 aaPredicted RBP7.9□□□□□ -1.15
CALD1-204ENST00000417172 KRTAP13-4Q3LI77 160 aa7.9□□□□□ -1.15
CALD1-204ENST00000417172 KRTAP25-1Q3LHN0 102 aa7.88□□□□□ -1.15
CALD1-204ENST00000417172 KRTAP9-8Q9BYQ0 159 aa7.78□□□□□ -1.16
CALD1-204ENST00000417172 LCE2AQ5TA79 106 aaPredicted RBP7.77□□□□□ -1.17
CALD1-204ENST00000417172 MT2AP02795 61 aa7.76□□□□□ -1.17
CALD1-204ENST00000417172 M0QZ58 72 aa7.75□□□□□ -1.17
CALD1-204ENST00000417172 A0A0D9SG42 100 aa7.74□□□□□ -1.17
CALD1-204ENST00000417172 MT1FP04733 61 aa7.74□□□□□ -1.17
CALD1-204ENST00000417172 R4GN34 69 aa7.74□□□□□ -1.17
CALD1-204ENST00000417172 KRTAP10-10P60014 251 aa7.68□□□□□ -1.18
CALD1-204ENST00000417172 CRIPTQ9P021 101 aa7.58□□□□□ -1.2
CALD1-204ENST00000417172 KRTAP19-1Q8IUB9 90 aa7.57□□□□□ -1.2
CALD1-204ENST00000417172 A0A0A0MQY5 61 aa7.55□□□□□ -1.2
CALD1-204ENST00000417172 KRTAP12-2P59991 146 aa7.55□□□□□ -1.2
CALD1-204ENST00000417172 K7ERS5 55 aa7.54□□□□□ -1.2
CALD1-204ENST00000417172 KRTAP12-1P59990 96 aa7.54□□□□□ -1.2
CALD1-204ENST00000417172 SPRR2GQ9BYE4 73 aa7.53□□□□□ -1.2
CALD1-204ENST00000417172 SPINT4Q6UDR6 99 aa7.52□□□□□ -1.21
CALD1-204ENST00000417172 KRTAP9-3Q9BYQ3 159 aa7.49□□□□□ -1.21
CALD1-204ENST00000417172 LCE2BO14633 110 aa7.33□□□□□ -1.24
CALD1-204ENST00000417172 KRTAP19-8Q3LI54 63 aa7.33□□□□□ -1.24
CALD1-204ENST00000417172 KRTAP15-1Q3LI76 137 aa7.33□□□□□ -1.24
CALD1-204ENST00000417172 NDUFAF8A1L188 74 aa7.33□□□□□ -1.24
CALD1-204ENST00000417172 MT1BP07438 61 aa7.31□□□□□ -1.24
CALD1-204ENST00000417172 PLAC4Q8WY50 150 aa7.25□□□□□ -1.25
CALD1-204ENST00000417172 CAMK2N1Q7Z7J9 78 aa7.25□□□□□ -1.25
CALD1-204ENST00000417172 USH2AO75445 5202 aa7.2□□□□□ -1.26
CALD1-204ENST00000417172 C10orf95Q9H7T3 257 aa7.15□□□□□ -1.26
CALD1-204ENST00000417172 LUZP6Q538Z0 58 aa7.13□□□□□ -1.27
CALD1-204ENST00000417172 MT1XP80297 61 aa7.06□□□□□ -1.28
CALD1-204ENST00000417172 KRTAP10-5P60370 271 aa7.05□□□□□ -1.28
CALD1-204ENST00000417172 FSIP2Q5CZC0 6907 aa7.04□□□□□ -1.28
CALD1-204ENST00000417172 LCE2DQ5TA82 110 aaPredicted RBP6.99□□□□□ -1.29
CALD1-204ENST00000417172 SSPOA2VEC9 5147 aa6.96□□□□□ -1.3
CALD1-204ENST00000417172 PRO2289Q9P1D8 64 aa6.87□□□□□ -1.31
CALD1-204ENST00000417172 TNP1P09430 55 aa6.86□□□□□ -1.31
CALD1-204ENST00000417172 KRTAP9-2Q9BYQ4 174 aa6.82□□□□□ -1.32
CALD1-204ENST00000417172 KRTAP10-7P60409 375 aaPredicted RBP6.81□□□□□ -1.32
CALD1-204ENST00000417172 KRTAP19-6Q3LI70 58 aa6.8□□□□□ -1.32
CALD1-204ENST00000417172 KMT2DO14686 5537 aa6.67□□□□□ -1.34
CALD1-204ENST00000417172 KRTAP10-12P60413 245 aa6.66□□□□□ -1.34
CALD1-204ENST00000417172 LCE3AQ5TA76 89 aa6.66□□□□□ -1.34
CALD1-204ENST00000417172 FCGBPQ9Y6R7 5405 aaPredicted RBP6.66□□□□□ -1.34
CALD1-204ENST00000417172 KRTAP4-8A0A0G2JLE6 195 aa6.58□□□□□ -1.36
CALD1-204ENST00000417172 KRTAP4-8Q9BYQ9 185 aa6.58□□□□□ -1.36
CALD1-204ENST00000417172 PP632Q6XCG6 107 aa6.57□□□□□ -1.36
CALD1-204ENST00000417172 CRCT1Q9UGL9 99 aa6.55□□□□□ -1.36
CALD1-204ENST00000417172 KRTAP23-1A1A580 65 aa6.54□□□□□ -1.36
CALD1-204ENST00000417172 KRTAP8-1Q8IUC2 63 aa6.44□□□□□ -1.38
CALD1-204ENST00000417172 MACF1Q9UPN3 7388 aaKnown RBP6.4□□□□□ -1.38
CALD1-204ENST00000417172 KRTAP19-5Q3LI72 72 aa6.38□□□□□ -1.39
CALD1-204ENST00000417172 KRTAP12-3P60328 96 aa6.35□□□□□ -1.39
CALD1-204ENST00000417172 KRTAP19-7Q3SYF9 63 aa6.3□□□□□ -1.4
CALD1-204ENST00000417172 KRTAP9-6A0A140TA67 174 aa6.27□□□□□ -1.41
CALD1-204ENST00000417172 SYNE2Q8WXH0 6885 aaKnown RBP6.24□□□□□ -1.41
CALD1-204ENST00000417172 SPRR5A0A1B0GTR4 108 aa6.19□□□□□ -1.42
CALD1-204ENST00000417172 INE1O15225 51 aa6.17□□□□□ -1.42
CALD1-204ENST00000417172 MT1EP04732 61 aa6.17□□□□□ -1.42
CALD1-204ENST00000417172 MUC12Q9UKN1 5478 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms