RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 LINC00208Q96KT6 92 aa4.07□□□□□ -1.76
MDC1-203ENST00000417033 CYP4F30PQ9H0H9 118 aa4.07□□□□□ -1.76
MDC1-203ENST00000417033 LOC101927531A0A1B0GV80 90 aa4.06□□□□□ -1.76
MDC1-203ENST00000417033 C1orf64Q8NEQ6 169 aa4.06□□□□□ -1.76
MDC1-203ENST00000417033 KLKP1Q107X0 134 aa4.05□□□□□ -1.76
MDC1-203ENST00000417033 C4orf26Q17RF5 130 aa4.05□□□□□ -1.76
MDC1-203ENST00000417033 C5orf47Q569G3 176 aa4.05□□□□□ -1.76
MDC1-203ENST00000417033 FSIP2Q5CZC0 6907 aa4.05□□□□□ -1.76
MDC1-203ENST00000417033 A0A0U1RQV1 116 aa4.04□□□□□ -1.76
MDC1-203ENST00000417033 MP68P56378 58 aa4.04□□□□□ -1.76
MDC1-203ENST00000417033 COX6B2Q6YFQ2 88 aa4.04□□□□□ -1.76
MDC1-203ENST00000417033 SMIM20Q8N5G0 67 aa4.04□□□□□ -1.76
MDC1-203ENST00000417033 FAM236DA0A1B0GTK5 79 aa4.03□□□□□ -1.76
MDC1-203ENST00000417033 FAM236CP0DP71 79 aa4.03□□□□□ -1.76
MDC1-203ENST00000417033 SERP2Q8N6R1 65 aa4.03□□□□□ -1.76
MDC1-203ENST00000417033 MT1HP80294 61 aa4.02□□□□□ -1.77
MDC1-203ENST00000417033 RBM12B-AS1Q9P1G2 102 aa4.02□□□□□ -1.77
MDC1-203ENST00000417033 SNURFQ9Y675 71 aa4.02□□□□□ -1.77
MDC1-203ENST00000417033 H3BPC8 53 aa4□□□□□ -1.77
MDC1-203ENST00000417033 C20orf197Q8N268 126 aa4□□□□□ -1.77
MDC1-203ENST00000417033 COX7CP15954 63 aa3.99□□□□□ -1.77
MDC1-203ENST00000417033 ANAPC13Q9BS18 74 aa3.98□□□□□ -1.77
MDC1-203ENST00000417033 CYSTM1Q9H1C7 97 aa3.98□□□□□ -1.77
MDC1-203ENST00000417033 CRCT1Q9UGL9 99 aa3.97□□□□□ -1.77
MDC1-203ENST00000417033 CCDC179H3BU77 68 aa3.95□□□□□ -1.78
MDC1-203ENST00000417033 H1FX-AS1Q4G0G2 97 aa3.95□□□□□ -1.78
MDC1-203ENST00000417033 FLGP20930 4061 aaPredicted RBP3.91□□□□□ -1.78
MDC1-203ENST00000417033 M0R2T5 61 aa3.91□□□□□ -1.78
MDC1-203ENST00000417033 DMAC1Q96GE9 116 aa3.9□□□□□ -1.79
MDC1-203ENST00000417033 H7BZZ5 65 aa3.89□□□□□ -1.79
MDC1-203ENST00000417033 KRTAP10-6P60371 365 aaPredicted RBP3.89□□□□□ -1.79
MDC1-203ENST00000417033 LCA10Q71F78 164 aa3.89□□□□□ -1.79
MDC1-203ENST00000417033 S4R3F8 94 aa3.89□□□□□ -1.79
MDC1-203ENST00000417033 A8MUN3 132 aa3.87□□□□□ -1.79
MDC1-203ENST00000417033 SPANXA2-OT1Q8N9U9 137 aa3.86□□□□□ -1.79
MDC1-203ENST00000417033 KRTAP9-8Q9BYQ0 159 aa3.84□□□□□ -1.79
MDC1-203ENST00000417033 NDUFC1O43677 76 aa3.83□□□□□ -1.8
MDC1-203ENST00000417033 MT2AP02795 61 aa3.82□□□□□ -1.8
MDC1-203ENST00000417033 MT1FP04733 61 aa3.81□□□□□ -1.8
MDC1-203ENST00000417033 ACYP2P14621 99 aa3.81□□□□□ -1.8
MDC1-203ENST00000417033 CSAG1Q6PB30 78 aa3.79□□□□□ -1.8
MDC1-203ENST00000417033 COA5Q86WW8 74 aa3.78□□□□□ -1.8
MDC1-203ENST00000417033 CHKB-CPT1BH3BT56 60 aa3.76□□□□□ -1.81
MDC1-203ENST00000417033 KRTAP10-10P60014 251 aa3.74□□□□□ -1.81
MDC1-203ENST00000417033 TMEM258P61165 79 aa3.74□□□□□ -1.81
MDC1-203ENST00000417033 LCE1AQ5T7P2 110 aa3.73□□□□□ -1.81
MDC1-203ENST00000417033 ATP5EP56381 51 aaPredicted RBP3.72□□□□□ -1.81
MDC1-203ENST00000417033 ADM2Q7Z4H4 148 aa3.71□□□□□ -1.82
MDC1-203ENST00000417033 H0YAA0 97 aa3.69□□□□□ -1.82
MDC1-203ENST00000417033 P0C880 135 aa3.69□□□□□ -1.82
MDC1-203ENST00000417033 SPTSSBQ8NFR3 76 aa3.68□□□□□ -1.82
MDC1-203ENST00000417033 KRTAP5-3Q6L8H2 238 aa3.67□□□□□ -1.82
MDC1-203ENST00000417033 SERP1Q9Y6X1 66 aa3.63□□□□□ -1.83
MDC1-203ENST00000417033 SYNE2Q8WXH0 6885 aaKnown RBP3.61□□□□□ -1.83
MDC1-203ENST00000417033 SSPOA2VEC9 5147 aa3.6□□□□□ -1.83
MDC1-203ENST00000417033 SPRR2GQ9BYE4 73 aa3.6□□□□□ -1.83
MDC1-203ENST00000417033 M0QZ58 72 aa3.57□□□□□ -1.84
MDC1-203ENST00000417033 MT3P25713 68 aa3.57□□□□□ -1.84
MDC1-203ENST00000417033 KRTAP13-4Q3LI77 160 aa3.57□□□□□ -1.84
MDC1-203ENST00000417033 CRIPTQ9P021 101 aa3.57□□□□□ -1.84
MDC1-203ENST00000417033 MACF1Q9UPN3 7388 aaKnown RBP3.56□□□□□ -1.84
MDC1-203ENST00000417033 MT1BP07438 61 aa3.56□□□□□ -1.84
MDC1-203ENST00000417033 KRTAP19-8Q3LI54 63 aa3.55□□□□□ -1.84
MDC1-203ENST00000417033 LINC01558Q9Y6Z2 57 aa3.55□□□□□ -1.84
MDC1-203ENST00000417033 R4GN34 69 aa3.55□□□□□ -1.84
MDC1-203ENST00000417033 A0A1B0GU69 56 aa3.54□□□□□ -1.84
MDC1-203ENST00000417033 USH2AO75445 5202 aa3.53□□□□□ -1.84
MDC1-203ENST00000417033 SEC61GP60059 68 aa3.53□□□□□ -1.84
MDC1-203ENST00000417033 LINC01554Q52M75 96 aa3.52□□□□□ -1.85
MDC1-203ENST00000417033 Q5VV11 94 aa3.51□□□□□ -1.85
MDC1-203ENST00000417033 SPATA8Q6RVD6 105 aa3.51□□□□□ -1.85
MDC1-203ENST00000417033 SMIM26A0A096LP01 95 aa3.5□□□□□ -1.85
MDC1-203ENST00000417033 A0A1B0GU33 70 aa3.5□□□□□ -1.85
MDC1-203ENST00000417033 RPS28P62857 69 aaKnown RBP3.5□□□□□ -1.85
MDC1-203ENST00000417033 PRR15LQ9BU68 103 aa3.5□□□□□ -1.85
MDC1-203ENST00000417033 FCGBPQ9Y6R7 5405 aaPredicted RBP3.49□□□□□ -1.85
MDC1-203ENST00000417033 NEBP20929 6669 aa3.48□□□□□ -1.85
MDC1-203ENST00000417033 PSPHP1O15172 72 aa3.48□□□□□ -1.85
MDC1-203ENST00000417033 Q1T7F1 81 aa3.47□□□□□ -1.85
MDC1-203ENST00000417033 A0A0D9SG42 100 aa3.46□□□□□ -1.86
MDC1-203ENST00000417033 A8MU10 97 aa3.45□□□□□ -1.86
MDC1-203ENST00000417033 KRTAP2-2Q9BYT5 123 aa3.45□□□□□ -1.86
MDC1-203ENST00000417033 KRTAP19-6Q3LI70 58 aa3.44□□□□□ -1.86
MDC1-203ENST00000417033 V9GYY9 64 aa3.43□□□□□ -1.86
MDC1-203ENST00000417033 PLAC4Q8WY50 150 aa3.4□□□□□ -1.87
MDC1-203ENST00000417033 A6NN06 94 aa3.39□□□□□ -1.87
MDC1-203ENST00000417033 KRTAP12-1P59990 96 aa3.39□□□□□ -1.87
MDC1-203ENST00000417033 KRTAP10-5P60370 271 aa3.39□□□□□ -1.87
MDC1-203ENST00000417033 MT1XP80297 61 aa3.39□□□□□ -1.87
MDC1-203ENST00000417033 UQCR11O14957 56 aa3.38□□□□□ -1.87
MDC1-203ENST00000417033 KRTAP12-2P59991 146 aa3.38□□□□□ -1.87
MDC1-203ENST00000417033 SPINT4Q6UDR6 99 aa3.37□□□□□ -1.87
MDC1-203ENST00000417033 MIR22HGQ0VDD5 57 aa3.36□□□□□ -1.87
MDC1-203ENST00000417033 PRAC1Q96KF2 57 aa3.36□□□□□ -1.87
MDC1-203ENST00000417033 KRTAP6-3Q3LI67 103 aa3.34□□□□□ -1.87
MDC1-203ENST00000417033 A6NED7 52 aa3.33□□□□□ -1.88
MDC1-203ENST00000417033 KRTAP20-1Q3LI63 56 aa3.31□□□□□ -1.88
MDC1-203ENST00000417033 CAMK2N1Q7Z7J9 78 aa3.31□□□□□ -1.88
MDC1-203ENST00000417033 NDUFAF8A1L188 74 aa3.29□□□□□ -1.88
MDC1-203ENST00000417033 PRO2289Q9P1D8 64 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms