RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, human

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIF3L1-206	ENST00000416651		Q6JHZ5	121 aa		3.98	□□□□□ -1.77
NIF3L1-206	ENST00000416651	JMJD7-PLA2G4B	H0Y9G9	81 aa		3.97	□□□□□ -1.77
NIF3L1-206	ENST00000416651		H3BQ85	93 aa		3.97	□□□□□ -1.77
NIF3L1-206	ENST00000416651	LCE1F	Q5T754	118 aa		3.97	□□□□□ -1.77
NIF3L1-206	ENST00000416651	FAM218A	Q96MZ4	157 aa		3.97	□□□□□ -1.77
NIF3L1-206	ENST00000416651	KRTAP4-3	Q9BYR4	195 aa		3.97	□□□□□ -1.77
NIF3L1-206	ENST00000416651	ORMDL1	Q9P0S3	153 aa		3.97	□□□□□ -1.77
NIF3L1-206	ENST00000416651	hADV29S1	A0JD25	119 aa		3.96	□□□□□ -1.78
NIF3L1-206	ENST00000416651	SERP2	Q8N6R1	65 aa		3.96	□□□□□ -1.78
NIF3L1-206	ENST00000416651	SPRR2F	Q96RM1	72 aa		3.96	□□□□□ -1.78
NIF3L1-206	ENST00000416651	HIST1H4A	P62805	103 aa	Known RBP	3.95	□□□□□ -1.78
NIF3L1-206	ENST00000416651	UBL5	Q9BZL1	73 aa		3.95	□□□□□ -1.78
NIF3L1-206	ENST00000416651	IGKV3D-7	A0A0C4DH55	119 aa		3.93	□□□□□ -1.78
NIF3L1-206	ENST00000416651	TMEM256-PLSCR3	K7ERE1	68 aa		3.93	□□□□□ -1.78
NIF3L1-206	ENST00000416651	CCK	P06307	115 aa		3.92	□□□□□ -1.78
NIF3L1-206	ENST00000416651	SMIM11B	Q8TCY0	68 aa		3.92	□□□□□ -1.78
NIF3L1-206	ENST00000416651	C14orf132	Q9NPU4	83 aa		3.92	□□□□□ -1.78
NIF3L1-206	ENST00000416651	PDE6G	P18545	87 aa		3.91	□□□□□ -1.78
NIF3L1-206	ENST00000416651	ATP5E	P56381	51 aa	Predicted RBP	3.9	□□□□□ -1.79
NIF3L1-206	ENST00000416651	NDUFC1	O43677	76 aa		3.88	□□□□□ -1.79
NIF3L1-206	ENST00000416651	SPRR2D	P22532	72 aa		3.88	□□□□□ -1.79
NIF3L1-206	ENST00000416651	DSCR8	Q96T75	97 aa		3.88	□□□□□ -1.79
NIF3L1-206	ENST00000416651	TRAV7	A0A075B6U4	112 aa		3.87	□□□□□ -1.79
NIF3L1-206	ENST00000416651	RBM3	P98179	157 aa	Known RBP	3.87	□□□□□ -1.79
NIF3L1-206	ENST00000416651	SERP1	Q9Y6X1	66 aa		3.87	□□□□□ -1.79
NIF3L1-206	ENST00000416651		F8WEM9	126 aa		3.86	□□□□□ -1.79
NIF3L1-206	ENST00000416651	KRTAP19-8	Q3LI54	63 aa		3.86	□□□□□ -1.79
NIF3L1-206	ENST00000416651	TRBV7-6	A0A0J9YX20	115 aa		3.85	□□□□□ -1.79
NIF3L1-206	ENST00000416651	C20orf197	Q8N268	126 aa		3.85	□□□□□ -1.79
NIF3L1-206	ENST00000416651		A0A087WVE0	104 aa		3.84	□□□□□ -1.79
NIF3L1-206	ENST00000416651		A0A1W2PNM2	257 aa		3.84	□□□□□ -1.79
NIF3L1-206	ENST00000416651	SPINK7	P58062	85 aa		3.84	□□□□□ -1.79
NIF3L1-206	ENST00000416651		Q5VV11	94 aa		3.84	□□□□□ -1.79
NIF3L1-206	ENST00000416651	LOC110117498	A0A087WWA1	95 aa		3.83	□□□□□ -1.8
NIF3L1-206	ENST00000416651	SMIM26	A0A096LP01	95 aa		3.83	□□□□□ -1.8
NIF3L1-206	ENST00000416651	LINC00313	P59037	77 aa		3.83	□□□□□ -1.8
NIF3L1-206	ENST00000416651	CXCL6	P80162	114 aa		3.83	□□□□□ -1.8
NIF3L1-206	ENST00000416651	OCR1	Q9BZK8	76 aa		3.83	□□□□□ -1.8
NIF3L1-206	ENST00000416651		Q6ZQY7	126 aa		3.82	□□□□□ -1.8
NIF3L1-206	ENST00000416651	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	3.81	□□□□□ -1.8
NIF3L1-206	ENST00000416651	LINC00575	Q6W349	94 aa		3.81	□□□□□ -1.8
NIF3L1-206	ENST00000416651	WFDC13	Q8IUB5	93 aa		3.81	□□□□□ -1.8
NIF3L1-206	ENST00000416651		A0A087WSZ3	146 aa		3.8	□□□□□ -1.8
NIF3L1-206	ENST00000416651	C4orf26	Q17RF5	130 aa		3.8	□□□□□ -1.8
NIF3L1-206	ENST00000416651		Q6ZQT0	140 aa		3.8	□□□□□ -1.8
NIF3L1-206	ENST00000416651	KRTAP5-2	Q701N4	177 aa		3.8	□□□□□ -1.8
NIF3L1-206	ENST00000416651	PRAC1	Q96KF2	57 aa		3.8	□□□□□ -1.8
NIF3L1-206	ENST00000416651	PRO0628	Q9UI54	55 aa		3.8	□□□□□ -1.8
NIF3L1-206	ENST00000416651	KLKP1	Q107X0	134 aa		3.79	□□□□□ -1.8
NIF3L1-206	ENST00000416651	DEFB116	Q30KQ4	102 aa		3.79	□□□□□ -1.8
NIF3L1-206	ENST00000416651	NREP	Q16612	68 aa		3.77	□□□□□ -1.81
NIF3L1-206	ENST00000416651	SPRR2G	Q9BYE4	73 aa		3.76	□□□□□ -1.81
NIF3L1-206	ENST00000416651		A0A1B0GW54	56 aa		3.75	□□□□□ -1.81
NIF3L1-206	ENST00000416651		H7BZZ5	65 aa		3.75	□□□□□ -1.81
NIF3L1-206	ENST00000416651	BPY2	O14599	106 aa		3.75	□□□□□ -1.81
NIF3L1-206	ENST00000416651	ZCCHC13	Q8WW36	166 aa	Known RBP	3.75	□□□□□ -1.81
NIF3L1-206	ENST00000416651	SNURF	Q9Y675	71 aa		3.75	□□□□□ -1.81
NIF3L1-206	ENST00000416651	IGKV4-1	P06312	121 aa		3.74	□□□□□ -1.81
NIF3L1-206	ENST00000416651	LCE3C	Q5T5A8	94 aa		3.74	□□□□□ -1.81
NIF3L1-206	ENST00000416651	KRTAP8-1	Q8IUC2	63 aa		3.74	□□□□□ -1.81
NIF3L1-206	ENST00000416651	TMEM254	Q8TBM7	123 aa		3.74	□□□□□ -1.81
NIF3L1-206	ENST00000416651	CYSTM1	Q9H1C7	97 aa		3.74	□□□□□ -1.81
NIF3L1-206	ENST00000416651	IGHV6-1	A0A0B4J1U7	121 aa		3.73	□□□□□ -1.81
NIF3L1-206	ENST00000416651	H1FX-AS1	Q4G0G2	97 aa		3.73	□□□□□ -1.81
NIF3L1-206	ENST00000416651	BRK1	Q8WUW1	75 aa		3.73	□□□□□ -1.81
NIF3L1-206	ENST00000416651	TRBV7-4	A0A0J9YYF1	115 aa		3.72	□□□□□ -1.81
NIF3L1-206	ENST00000416651	PSPHP1	O15172	72 aa		3.72	□□□□□ -1.81
NIF3L1-206	ENST00000416651	NDUFS5	O43920	106 aa		3.72	□□□□□ -1.81
NIF3L1-206	ENST00000416651	NDUFB1	O75438	58 aa		3.7	□□□□□ -1.82
NIF3L1-206	ENST00000416651	DST	Q03001	7570 aa	Known RBP	3.7	□□□□□ -1.82
NIF3L1-206	ENST00000416651	MP68	P56378	58 aa		3.67	□□□□□ -1.82
NIF3L1-206	ENST00000416651	LINC00472	Q9H8W2	130 aa		3.66	□□□□□ -1.82
NIF3L1-206	ENST00000416651	LCE3A	Q5TA76	89 aa		3.64	□□□□□ -1.83
NIF3L1-206	ENST00000416651	C8orf87	E5RJ46	101 aa		3.63	□□□□□ -1.83
NIF3L1-206	ENST00000416651		H3BPC8	53 aa		3.63	□□□□□ -1.83
NIF3L1-206	ENST00000416651	MT1X	P80297	61 aa		3.63	□□□□□ -1.83
NIF3L1-206	ENST00000416651	PMAIP1	Q13794	54 aa		3.63	□□□□□ -1.83
NIF3L1-206	ENST00000416651	hDV103S1	A0JD37	113 aa		3.62	□□□□□ -1.83
NIF3L1-206	ENST00000416651	HCG22	E2RYF7	251 aa		3.62	□□□□□ -1.83
NIF3L1-206	ENST00000416651		Q1T7F1	81 aa		3.62	□□□□□ -1.83
NIF3L1-206	ENST00000416651	PRR15	Q8IV56	129 aa		3.62	□□□□□ -1.83
NIF3L1-206	ENST00000416651		Q8N9L7	120 aa		3.62	□□□□□ -1.83
NIF3L1-206	ENST00000416651		A0A1B0GVX0	72 aa		3.61	□□□□□ -1.83
NIF3L1-206	ENST00000416651	CYP4F30P	Q9H0H9	118 aa		3.6	□□□□□ -1.83
NIF3L1-206	ENST00000416651	HMCN1	Q96RW7	5635 aa		3.6	□□□□□ -1.83
NIF3L1-206	ENST00000416651	KRTAP5-10	Q6L8G5	202 aa		3.58	□□□□□ -1.84
NIF3L1-206	ENST00000416651	CAMK2N1	Q7Z7J9	78 aa		3.58	□□□□□ -1.84
NIF3L1-206	ENST00000416651	C1orf64	Q8NEQ6	169 aa		3.58	□□□□□ -1.84
NIF3L1-206	ENST00000416651	AHNAK2	Q8IVF2	5795 aa		3.57	□□□□□ -1.84
NIF3L1-206	ENST00000416651	SPANXA2-OT1	Q8N9U9	137 aa		3.57	□□□□□ -1.84
NIF3L1-206	ENST00000416651	LINC00208	Q96KT6	92 aa		3.56	□□□□□ -1.84
NIF3L1-206	ENST00000416651		H0Y9P7	68 aa		3.55	□□□□□ -1.84
NIF3L1-206	ENST00000416651		K7EQZ3	153 aa		3.55	□□□□□ -1.84
NIF3L1-206	ENST00000416651	CASC2	Q6XLA1	102 aa		3.55	□□□□□ -1.84
NIF3L1-206	ENST00000416651	TRAV22	A0A0B4J277	110 aa		3.54	□□□□□ -1.84
NIF3L1-206	ENST00000416651	CHKB-CPT1B	H3BT56	60 aa		3.54	□□□□□ -1.84
NIF3L1-206	ENST00000416651	PRR15L	Q9BU68	103 aa		3.53	□□□□□ -1.84
NIF3L1-206	ENST00000416651		A6NED7	52 aa		3.52	□□□□□ -1.85
NIF3L1-206	ENST00000416651	KRTAP12-2	P59991	146 aa		3.52	□□□□□ -1.85
NIF3L1-206	ENST00000416651	TP53AIP1	Q9HCN2	124 aa		3.52	□□□□□ -1.85

Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms