RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 SPATA8Q6RVD6 105 aa7.92□□□□□ -1.14
SGCE-202ENST00000415788 IGKV2-30P06310 120 aa7.91□□□□□ -1.14
SGCE-202ENST00000415788 LINC00313P59037 77 aa7.91□□□□□ -1.14
SGCE-202ENST00000415788 XP32Q5T750 250 aa7.89□□□□□ -1.15
SGCE-202ENST00000415788 LPAP08519 4548 aa7.87□□□□□ -1.15
SGCE-202ENST00000415788 UQCR11O14957 56 aa7.85□□□□□ -1.15
SGCE-202ENST00000415788 MIR22HGQ0VDD5 57 aa7.83□□□□□ -1.16
SGCE-202ENST00000415788 SEC61BP60468 96 aaKnown RBP7.81□□□□□ -1.16
SGCE-202ENST00000415788 LRP2P98164 4655 aa7.81□□□□□ -1.16
SGCE-202ENST00000415788 RPL37P61927 97 aaKnown RBP7.81□□□□□ -1.16
SGCE-202ENST00000415788 KRTAP16-1A8MUX0 517 aa7.8□□□□□ -1.16
SGCE-202ENST00000415788 C20orf166-AS1Q96NR2 134 aa7.8□□□□□ -1.16
SGCE-202ENST00000415788 PRAC1Q96KF2 57 aa7.79□□□□□ -1.16
SGCE-202ENST00000415788 A8MUU9 505 aa7.78□□□□□ -1.16
SGCE-202ENST00000415788 LINC01554Q52M75 96 aa7.75□□□□□ -1.17
SGCE-202ENST00000415788 IGKV2D-30A0A075B6S6 120 aa7.74□□□□□ -1.17
SGCE-202ENST00000415788 ADM2Q7Z4H4 148 aa7.72□□□□□ -1.17
SGCE-202ENST00000415788 UBR4Q5T4S7 5183 aa7.71□□□□□ -1.17
SGCE-202ENST00000415788 MUC17Q685J3 4493 aa7.66□□□□□ -1.18
SGCE-202ENST00000415788 CSAG1Q6PB30 78 aa7.58□□□□□ -1.2
SGCE-202ENST00000415788 KRTAP4-1Q9BYQ7 146 aa7.58□□□□□ -1.2
SGCE-202ENST00000415788 RNF213Q63HN8 5207 aa7.51□□□□□ -1.21
SGCE-202ENST00000415788 MUC2Q02817 5179 aa7.49□□□□□ -1.21
SGCE-202ENST00000415788 H0YAA0 97 aa7.46□□□□□ -1.22
SGCE-202ENST00000415788 A0A1B0GU33 70 aa7.43□□□□□ -1.22
SGCE-202ENST00000415788 KRTAP25-1Q3LHN0 102 aa7.41□□□□□ -1.22
SGCE-202ENST00000415788 H1FX-AS1Q4G0G2 97 aa7.41□□□□□ -1.22
SGCE-202ENST00000415788 KRTAP3-3Q9BYR6 98 aa7.39□□□□□ -1.23
SGCE-202ENST00000415788 KRTAP3-2Q9BYR7 98 aa7.39□□□□□ -1.23
SGCE-202ENST00000415788 KRTAP19-2Q3LHN2 52 aa7.36□□□□□ -1.23
SGCE-202ENST00000415788 COX6B2Q6YFQ2 88 aa7.36□□□□□ -1.23
SGCE-202ENST00000415788 K7ERS5 55 aa7.34□□□□□ -1.23
SGCE-202ENST00000415788 KRTAP3-1Q9BYR8 98 aa7.33□□□□□ -1.24
SGCE-202ENST00000415788 H3BS24 57 aa7.32□□□□□ -1.24
SGCE-202ENST00000415788 LCE2CQ5TA81 110 aa7.32□□□□□ -1.24
SGCE-202ENST00000415788 ROMO1P60602 79 aa7.25□□□□□ -1.25
SGCE-202ENST00000415788 FAT4Q6V0I7 4981 aa7.24□□□□□ -1.25
SGCE-202ENST00000415788 LCE2AQ5TA79 106 aaPredicted RBP7.22□□□□□ -1.25
SGCE-202ENST00000415788 MT1HP80294 61 aa7.21□□□□□ -1.25
SGCE-202ENST00000415788 M0R2T5 61 aa7.14□□□□□ -1.27
SGCE-202ENST00000415788 FLGP20930 4061 aaPredicted RBP7.06□□□□□ -1.28
SGCE-202ENST00000415788 KRTAP10-6P60371 365 aaPredicted RBP7.06□□□□□ -1.28
SGCE-202ENST00000415788 CRIPTQ9P021 101 aa7.04□□□□□ -1.28
SGCE-202ENST00000415788 S4R3F8 94 aa7.02□□□□□ -1.29
SGCE-202ENST00000415788 LORP23490 312 aaPredicted RBP6.99□□□□□ -1.29
SGCE-202ENST00000415788 P0C880 135 aa6.98□□□□□ -1.29
SGCE-202ENST00000415788 KRTAP13-4Q3LI77 160 aa6.97□□□□□ -1.29
SGCE-202ENST00000415788 A0A0D9SG42 100 aa6.94□□□□□ -1.3
SGCE-202ENST00000415788 SPINT4Q6UDR6 99 aa6.92□□□□□ -1.3
SGCE-202ENST00000415788 KRTAP9-8Q9BYQ0 159 aa6.88□□□□□ -1.31
SGCE-202ENST00000415788 LOC100996750A0A140TA64 210 aa6.87□□□□□ -1.31
SGCE-202ENST00000415788 KRTAP4-6Q9BYQ5 205 aa6.87□□□□□ -1.31
SGCE-202ENST00000415788 MT2AP02795 61 aa6.83□□□□□ -1.32
SGCE-202ENST00000415788 KRTAP15-1Q3LI76 137 aa6.8□□□□□ -1.32
SGCE-202ENST00000415788 KRTAP12-2P59991 146 aa6.79□□□□□ -1.32
SGCE-202ENST00000415788 C10orf95Q9H7T3 257 aa6.79□□□□□ -1.32
SGCE-202ENST00000415788 MT1FP04733 61 aa6.77□□□□□ -1.33
SGCE-202ENST00000415788 KRTAP10-10P60014 251 aa6.77□□□□□ -1.33
SGCE-202ENST00000415788 KRTAP12-1P59990 96 aa6.77□□□□□ -1.33
SGCE-202ENST00000415788 M0QZ58 72 aa6.76□□□□□ -1.33
SGCE-202ENST00000415788 NDUFAF8A1L188 74 aa6.67□□□□□ -1.34
SGCE-202ENST00000415788 KRTAP9-3Q9BYQ3 159 aa6.66□□□□□ -1.34
SGCE-202ENST00000415788 KRTAP9-2Q9BYQ4 174 aa6.65□□□□□ -1.34
SGCE-202ENST00000415788 SPRR2GQ9BYE4 73 aa6.53□□□□□ -1.36
SGCE-202ENST00000415788 LCE2BO14633 110 aa6.51□□□□□ -1.37
SGCE-202ENST00000415788 KRTAP19-1Q8IUB9 90 aa6.51□□□□□ -1.37
SGCE-202ENST00000415788 R4GN34 69 aa6.47□□□□□ -1.37
SGCE-202ENST00000415788 KRTAP19-8Q3LI54 63 aa6.41□□□□□ -1.38
SGCE-202ENST00000415788 PLAC4Q8WY50 150 aa6.39□□□□□ -1.39
SGCE-202ENST00000415788 CRCT1Q9UGL9 99 aa6.36□□□□□ -1.39
SGCE-202ENST00000415788 FSIP2Q5CZC0 6907 aa6.35□□□□□ -1.39
SGCE-202ENST00000415788 USH2AO75445 5202 aa6.34□□□□□ -1.39
SGCE-202ENST00000415788 PP632Q6XCG6 107 aa6.34□□□□□ -1.39
SGCE-202ENST00000415788 MT1BP07438 61 aa6.32□□□□□ -1.4
SGCE-202ENST00000415788 KRTAP9-6A0A140TA67 174 aa6.3□□□□□ -1.4
SGCE-202ENST00000415788 KRTAP19-6Q3LI70 58 aa6.26□□□□□ -1.41
SGCE-202ENST00000415788 LUZP6Q538Z0 58 aa6.2□□□□□ -1.42
SGCE-202ENST00000415788 SSPOA2VEC9 5147 aa6.18□□□□□ -1.42
SGCE-202ENST00000415788 CAMK2N1Q7Z7J9 78 aa6.16□□□□□ -1.42
SGCE-202ENST00000415788 KRTAP10-5P60370 271 aa6.11□□□□□ -1.43
SGCE-202ENST00000415788 KRTAP23-1A1A580 65 aa6.11□□□□□ -1.43
SGCE-202ENST00000415788 PRO2289Q9P1D8 64 aa6.1□□□□□ -1.43
SGCE-202ENST00000415788 A0A0A0MQY5 61 aa6.09□□□□□ -1.44
SGCE-202ENST00000415788 MT1XP80297 61 aa6.04□□□□□ -1.44
SGCE-202ENST00000415788 FCGBPQ9Y6R7 5405 aaPredicted RBP6.03□□□□□ -1.44
SGCE-202ENST00000415788 TNP1P09430 55 aa6.02□□□□□ -1.45
SGCE-202ENST00000415788 KRTAP4-8Q9BYQ9 185 aa5.97□□□□□ -1.45
SGCE-202ENST00000415788 SPRR5A0A1B0GTR4 108 aa5.96□□□□□ -1.46
SGCE-202ENST00000415788 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.9□□□□□ -1.46
SGCE-202ENST00000415788 MACF1Q9UPN3 7388 aaKnown RBP5.85□□□□□ -1.47
SGCE-202ENST00000415788 KRTAP10-7P60409 375 aaPredicted RBP5.76□□□□□ -1.49
SGCE-202ENST00000415788 KRTAP10-12P60413 245 aa5.75□□□□□ -1.49
SGCE-202ENST00000415788 KRTAP9-7A8MTY7 169 aa5.71□□□□□ -1.5
SGCE-202ENST00000415788 SYNE2Q8WXH0 6885 aaKnown RBP5.69□□□□□ -1.5
SGCE-202ENST00000415788 KRTAP6-3Q3LI67 103 aa5.67□□□□□ -1.5
SGCE-202ENST00000415788 KRTAP4-8A0A0G2JLE6 195 aa5.66□□□□□ -1.5
SGCE-202ENST00000415788 LCE3BQ5TA77 95 aa5.64□□□□□ -1.51
SGCE-202ENST00000415788 KRTAP8-1Q8IUC2 63 aa5.63□□□□□ -1.51
SGCE-202ENST00000415788 KRTAP5-9P26371 169 aa5.59□□□□□ -1.51
SGCE-202ENST00000415788 LCE3AQ5TA76 89 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 165.8 ms