RNA–Protein interactions for RNA: ENST00000415691.2

HNF4A-204, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 2,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-204ENST00000415691 PCLOQ9Y6V0 5065 aa7.39□□□□□ -1.23
HNF4A-204ENST00000415691 MT1HL1P0DM35 61 aa7.39□□□□□ -1.23
HNF4A-204ENST00000415691 A8MUU9 505 aa7.38□□□□□ -1.23
HNF4A-204ENST00000415691 KRTAP16-1A8MUX0 517 aa7.37□□□□□ -1.23
HNF4A-204ENST00000415691 ROMO1P60602 79 aa7.36□□□□□ -1.23
HNF4A-204ENST00000415691 LINC00304Q8N9R0 145 aa7.33□□□□□ -1.24
HNF4A-204ENST00000415691 H0YAA0 97 aa7.29□□□□□ -1.24
HNF4A-204ENST00000415691 J3QL48 77 aa7.28□□□□□ -1.24
HNF4A-204ENST00000415691 DMBT1Q9UGM3 2413 aaPredicted RBP7.28□□□□□ -1.24
HNF4A-204ENST00000415691 SPINK1P00995 79 aa7.27□□□□□ -1.25
HNF4A-204ENST00000415691 A0A1B0GU33 70 aa7.19□□□□□ -1.26
HNF4A-204ENST00000415691 RPS29P62273 56 aaKnown RBP7.19□□□□□ -1.26
HNF4A-204ENST00000415691 HERC1Q15751 4861 aa7.17□□□□□ -1.26
HNF4A-204ENST00000415691 H1FX-AS1Q4G0G2 97 aa7.16□□□□□ -1.26
HNF4A-204ENST00000415691 K7ERS5 55 aa7.13□□□□□ -1.27
HNF4A-204ENST00000415691 P0C880 135 aa7.1□□□□□ -1.27
HNF4A-204ENST00000415691 LPAP08519 4548 aa7.04□□□□□ -1.28
HNF4A-204ENST00000415691 C9orf92A6NGG3 77 aa7.01□□□□□ -1.29
HNF4A-204ENST00000415691 HMCN2Q8NDA2 5059 aa7□□□□□ -1.29
HNF4A-204ENST00000415691 KRTAP3-1Q9BYR8 98 aa6.99□□□□□ -1.29
HNF4A-204ENST00000415691 COX6B2Q6YFQ2 88 aa6.98□□□□□ -1.29
HNF4A-204ENST00000415691 CRIPTQ9P021 101 aa6.96□□□□□ -1.3
HNF4A-204ENST00000415691 TPRXLQ17RH7 258 aa6.93□□□□□ -1.3
HNF4A-204ENST00000415691 C20orf166-AS1Q96NR2 134 aa6.93□□□□□ -1.3
HNF4A-204ENST00000415691 LRP2P98164 4655 aa6.92□□□□□ -1.3
HNF4A-204ENST00000415691 RPL37P61927 97 aaKnown RBP6.92□□□□□ -1.3
HNF4A-204ENST00000415691 SPINT4Q6UDR6 99 aa6.9□□□□□ -1.31
HNF4A-204ENST00000415691 XP32Q5T750 250 aa6.89□□□□□ -1.31
HNF4A-204ENST00000415691 KRTAP15-1Q3LI76 137 aa6.85□□□□□ -1.31
HNF4A-204ENST00000415691 KRTAP10-6P60371 365 aaPredicted RBP6.79□□□□□ -1.32
HNF4A-204ENST00000415691 NDUFAF8A1L188 74 aa6.78□□□□□ -1.32
HNF4A-204ENST00000415691 UBR4Q5T4S7 5183 aa6.76□□□□□ -1.33
HNF4A-204ENST00000415691 MUC17Q685J3 4493 aa6.75□□□□□ -1.33
HNF4A-204ENST00000415691 KRTAP13-4Q3LI77 160 aa6.74□□□□□ -1.33
HNF4A-204ENST00000415691 KRTAP3-2Q9BYR7 98 aa6.7□□□□□ -1.34
HNF4A-204ENST00000415691 C10orf95Q9H7T3 257 aa6.7□□□□□ -1.34
HNF4A-204ENST00000415691 SEC61BP60468 96 aaKnown RBP6.69□□□□□ -1.34
HNF4A-204ENST00000415691 MUC2Q02817 5179 aa6.69□□□□□ -1.34
HNF4A-204ENST00000415691 A0A0D9SG42 100 aa6.68□□□□□ -1.34
HNF4A-204ENST00000415691 KRTAP3-3Q9BYR6 98 aa6.68□□□□□ -1.34
HNF4A-204ENST00000415691 KRTAP4-1Q9BYQ7 146 aa6.67□□□□□ -1.34
HNF4A-204ENST00000415691 RNF213Q63HN8 5207 aa6.65□□□□□ -1.34
HNF4A-204ENST00000415691 S4R3F8 94 aa6.65□□□□□ -1.34
HNF4A-204ENST00000415691 KRTAP12-2P59991 146 aa6.57□□□□□ -1.36
HNF4A-204ENST00000415691 KRTAP12-1P59990 96 aa6.53□□□□□ -1.36
HNF4A-204ENST00000415691 A0A0A0MQY5 61 aa6.47□□□□□ -1.37
HNF4A-204ENST00000415691 M0QZ58 72 aa6.44□□□□□ -1.38
HNF4A-204ENST00000415691 KRTAP19-2Q3LHN2 52 aa6.42□□□□□ -1.38
HNF4A-204ENST00000415691 FAT4Q6V0I7 4981 aa6.38□□□□□ -1.39
HNF4A-204ENST00000415691 LCE2CQ5TA81 110 aa6.37□□□□□ -1.39
HNF4A-204ENST00000415691 LUZP6Q538Z0 58 aa6.36□□□□□ -1.39
HNF4A-204ENST00000415691 PLAC4Q8WY50 150 aa6.31□□□□□ -1.4
HNF4A-204ENST00000415691 FLGP20930 4061 aaPredicted RBP6.3□□□□□ -1.4
HNF4A-204ENST00000415691 MT1HP80294 61 aa6.24□□□□□ -1.41
HNF4A-204ENST00000415691 M0R2T5 61 aa6.16□□□□□ -1.42
HNF4A-204ENST00000415691 LCE2AQ5TA79 106 aaPredicted RBP6.16□□□□□ -1.42
HNF4A-204ENST00000415691 PP632Q6XCG6 107 aa6.14□□□□□ -1.43
HNF4A-204ENST00000415691 R4GN34 69 aa6.09□□□□□ -1.43
HNF4A-204ENST00000415691 LORP23490 312 aaPredicted RBP6.01□□□□□ -1.45
HNF4A-204ENST00000415691 KRTAP9-8Q9BYQ0 159 aa5.99□□□□□ -1.45
HNF4A-204ENST00000415691 MT2AP02795 61 aa5.94□□□□□ -1.46
HNF4A-204ENST00000415691 MT1FP04733 61 aa5.91□□□□□ -1.46
HNF4A-204ENST00000415691 SPRR5A0A1B0GTR4 108 aa5.9□□□□□ -1.47
HNF4A-204ENST00000415691 KRTAP23-1A1A580 65 aa5.88□□□□□ -1.47
HNF4A-204ENST00000415691 KRTAP10-10P60014 251 aa5.88□□□□□ -1.47
HNF4A-204ENST00000415691 CAMK2N1Q7Z7J9 78 aa5.82□□□□□ -1.48
HNF4A-204ENST00000415691 KRTAP9-3Q9BYQ3 159 aa5.77□□□□□ -1.49
HNF4A-204ENST00000415691 TNP1P09430 55 aa5.72□□□□□ -1.49
HNF4A-204ENST00000415691 KRTAP19-1Q8IUB9 90 aa5.71□□□□□ -1.49
HNF4A-204ENST00000415691 PRO2289Q9P1D8 64 aa5.7□□□□□ -1.5
HNF4A-204ENST00000415691 LCE2BO14633 110 aa5.68□□□□□ -1.5
HNF4A-204ENST00000415691 SPRR2GQ9BYE4 73 aa5.66□□□□□ -1.5
HNF4A-204ENST00000415691 LCE2DQ5TA82 110 aaPredicted RBP5.65□□□□□ -1.5
HNF4A-204ENST00000415691 USH2AO75445 5202 aa5.63□□□□□ -1.51
HNF4A-204ENST00000415691 KRTAP9-2Q9BYQ4 174 aa5.6□□□□□ -1.51
HNF4A-204ENST00000415691 FSIP2Q5CZC0 6907 aa5.59□□□□□ -1.51
HNF4A-204ENST00000415691 INE1O15225 51 aa5.58□□□□□ -1.52
HNF4A-204ENST00000415691 KRTAP19-8Q3LI54 63 aa5.56□□□□□ -1.52
HNF4A-204ENST00000415691 MT1BP07438 61 aa5.53□□□□□ -1.52
HNF4A-204ENST00000415691 SSPOA2VEC9 5147 aa5.48□□□□□ -1.53
HNF4A-204ENST00000415691 CRCT1Q9UGL9 99 aa5.36□□□□□ -1.55
HNF4A-204ENST00000415691 KRTAP19-6Q3LI70 58 aa5.34□□□□□ -1.56
HNF4A-204ENST00000415691 MT1XP80297 61 aa5.3□□□□□ -1.56
HNF4A-204ENST00000415691 LCE3AQ5TA76 89 aa5.3□□□□□ -1.56
HNF4A-204ENST00000415691 FCGBPQ9Y6R7 5405 aaPredicted RBP5.29□□□□□ -1.56
HNF4A-204ENST00000415691 KRTAP10-5P60370 271 aa5.29□□□□□ -1.56
HNF4A-204ENST00000415691 KRTAP8-1Q8IUC2 63 aa5.27□□□□□ -1.57
HNF4A-204ENST00000415691 KRTAP9-6A0A140TA67 174 aa5.25□□□□□ -1.57
HNF4A-204ENST00000415691 KRTAP10-7P60409 375 aaPredicted RBP5.1□□□□□ -1.59
HNF4A-204ENST00000415691 KRTAP10-12P60413 245 aa5.08□□□□□ -1.6
HNF4A-204ENST00000415691 MACF1Q9UPN3 7388 aaKnown RBP5.07□□□□□ -1.6
HNF4A-204ENST00000415691 KMT2DO14686 5537 aa5.07□□□□□ -1.6
HNF4A-204ENST00000415691 KRTAP12-3P60328 96 aa5.06□□□□□ -1.6
HNF4A-204ENST00000415691 SYNE2Q8WXH0 6885 aaKnown RBP5□□□□□ -1.61
HNF4A-204ENST00000415691 KRTAP4-8A0A0G2JLE6 195 aa4.98□□□□□ -1.61
HNF4A-204ENST00000415691 KRTAP4-8Q9BYQ9 185 aa4.98□□□□□ -1.61
HNF4A-204ENST00000415691 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.96□□□□□ -1.61
HNF4A-204ENST00000415691 LCE3CQ5T5A8 94 aa4.8□□□□□ -1.64
HNF4A-204ENST00000415691 KRTAP9-7A8MTY7 169 aa4.77□□□□□ -1.65
HNF4A-204ENST00000415691 KRTAP6-3Q3LI67 103 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms