RNA–Protein interactions for RNA: ENST00000415068.1

ZNF3-206, Transcript of zinc finger protein 3, humanhuman

TSL 1 (best)

Gene ZNF3, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-206ENST00000415068 SPTSSBQ8NFR3 76 aa6.66□□□□□ -1.34
ZNF3-206ENST00000415068 CHKB-CPT1BH3BT56 60 aa6.65□□□□□ -1.34
ZNF3-206ENST00000415068 Q1T7F1 81 aa6.64□□□□□ -1.35
ZNF3-206ENST00000415068 V9GYY9 64 aa6.63□□□□□ -1.35
ZNF3-206ENST00000415068 LINC01558Q9Y6Z2 57 aa6.58□□□□□ -1.36
ZNF3-206ENST00000415068 S4R3F8 94 aa6.58□□□□□ -1.36
ZNF3-206ENST00000415068 LCA10Q71F78 164 aa6.56□□□□□ -1.36
ZNF3-206ENST00000415068 LCE2CQ5TA81 110 aa6.52□□□□□ -1.37
ZNF3-206ENST00000415068 CSAG1Q6PB30 78 aa6.51□□□□□ -1.37
ZNF3-206ENST00000415068 H0YAA0 97 aa6.46□□□□□ -1.38
ZNF3-206ENST00000415068 PRR15LQ9BU68 103 aa6.43□□□□□ -1.38
ZNF3-206ENST00000415068 SEC61GP60059 68 aa6.42□□□□□ -1.38
ZNF3-206ENST00000415068 A0A1B0GU69 56 aa6.4□□□□□ -1.38
ZNF3-206ENST00000415068 Q5VV11 94 aa6.38□□□□□ -1.39
ZNF3-206ENST00000415068 MUC2Q02817 5179 aa6.37□□□□□ -1.39
ZNF3-206ENST00000415068 FLGP20930 4061 aaPredicted RBP6.36□□□□□ -1.39
ZNF3-206ENST00000415068 PSPHP1O15172 72 aa6.35□□□□□ -1.39
ZNF3-206ENST00000415068 KRTAP10-6P60371 365 aaPredicted RBP6.35□□□□□ -1.39
ZNF3-206ENST00000415068 MT1HP80294 61 aa6.33□□□□□ -1.4
ZNF3-206ENST00000415068 UBR4Q5T4S7 5183 aa6.28□□□□□ -1.4
ZNF3-206ENST00000415068 A0A1B0GU33 70 aa6.27□□□□□ -1.41
ZNF3-206ENST00000415068 UQCR11O14957 56 aa6.26□□□□□ -1.41
ZNF3-206ENST00000415068 ADM2Q7Z4H4 148 aa6.26□□□□□ -1.41
ZNF3-206ENST00000415068 RNF213Q63HN8 5207 aa6.25□□□□□ -1.41
ZNF3-206ENST00000415068 P0C880 135 aa6.23□□□□□ -1.41
ZNF3-206ENST00000415068 SPATA8Q6RVD6 105 aa6.23□□□□□ -1.41
ZNF3-206ENST00000415068 M0QZ58 72 aa6.21□□□□□ -1.42
ZNF3-206ENST00000415068 LCE2BO14633 110 aa6.21□□□□□ -1.42
ZNF3-206ENST00000415068 LCE2AQ5TA79 106 aaPredicted RBP6.19□□□□□ -1.42
ZNF3-206ENST00000415068 CRIPTQ9P021 101 aa6.19□□□□□ -1.42
ZNF3-206ENST00000415068 A6NED7 52 aa6.18□□□□□ -1.42
ZNF3-206ENST00000415068 M0R2T5 61 aa6.18□□□□□ -1.42
ZNF3-206ENST00000415068 KRTAP9-8Q9BYQ0 159 aa6.16□□□□□ -1.42
ZNF3-206ENST00000415068 CDC42SE1Q9NRR8 79 aa6.16□□□□□ -1.42
ZNF3-206ENST00000415068 MIR22HGQ0VDD5 57 aa6.14□□□□□ -1.43
ZNF3-206ENST00000415068 FAT4Q6V0I7 4981 aa6.13□□□□□ -1.43
ZNF3-206ENST00000415068 LORP23490 312 aaPredicted RBP6.11□□□□□ -1.43
ZNF3-206ENST00000415068 KRTAP13-4Q3LI77 160 aa6.08□□□□□ -1.44
ZNF3-206ENST00000415068 MT2AP02795 61 aa6.07□□□□□ -1.44
ZNF3-206ENST00000415068 R4GN34 69 aa6.07□□□□□ -1.44
ZNF3-206ENST00000415068 BRK1Q8WUW1 75 aa6.05□□□□□ -1.44
ZNF3-206ENST00000415068 SPRR2GQ9BYE4 73 aa6.04□□□□□ -1.44
ZNF3-206ENST00000415068 PRO0628Q9UI54 55 aa6.02□□□□□ -1.45
ZNF3-206ENST00000415068 A6NN06 94 aa6.01□□□□□ -1.45
ZNF3-206ENST00000415068 MT1FP04733 61 aa6.01□□□□□ -1.45
ZNF3-206ENST00000415068 KRTAP10-10P60014 251 aa6□□□□□ -1.45
ZNF3-206ENST00000415068 A8MU10 97 aa5.98□□□□□ -1.45
ZNF3-206ENST00000415068 KRTAP19-1Q8IUB9 90 aa5.96□□□□□ -1.46
ZNF3-206ENST00000415068 KRTAP9-3Q9BYQ3 159 aa5.95□□□□□ -1.46
ZNF3-206ENST00000415068 KRTAP12-1P59990 96 aa5.91□□□□□ -1.46
ZNF3-206ENST00000415068 K7ERS5 55 aa5.9□□□□□ -1.46
ZNF3-206ENST00000415068 KRTAP19-8Q3LI54 63 aa5.89□□□□□ -1.47
ZNF3-206ENST00000415068 A0A0D9SG42 100 aa5.88□□□□□ -1.47
ZNF3-206ENST00000415068 KRTAP12-2P59991 146 aa5.83□□□□□ -1.48
ZNF3-206ENST00000415068 LINC01554Q52M75 96 aa5.83□□□□□ -1.48
ZNF3-206ENST00000415068 PMAIP1Q13794 54 aa5.8□□□□□ -1.48
ZNF3-206ENST00000415068 SPINT4Q6UDR6 99 aa5.78□□□□□ -1.48
ZNF3-206ENST00000415068 PLAC4Q8WY50 150 aa5.75□□□□□ -1.49
ZNF3-206ENST00000415068 MT1BP07438 61 aa5.74□□□□□ -1.49
ZNF3-206ENST00000415068 ROMO1P60602 79 aa5.65□□□□□ -1.5
ZNF3-206ENST00000415068 CAMK2N1Q7Z7J9 78 aa5.64□□□□□ -1.51
ZNF3-206ENST00000415068 C10orf95Q9H7T3 257 aa5.58□□□□□ -1.52
ZNF3-206ENST00000415068 KTN1-AS1Q86SY8 53 aa5.54□□□□□ -1.52
ZNF3-206ENST00000415068 KRTAP10-5P60370 271 aa5.53□□□□□ -1.52
ZNF3-206ENST00000415068 MT1XP80297 61 aa5.53□□□□□ -1.52
ZNF3-206ENST00000415068 PRO2289Q9P1D8 64 aa5.52□□□□□ -1.53
ZNF3-206ENST00000415068 KRTAP25-1Q3LHN0 102 aa5.5□□□□□ -1.53
ZNF3-206ENST00000415068 KRTAP19-6Q3LI70 58 aa5.47□□□□□ -1.53
ZNF3-206ENST00000415068 KRTAP23-1A1A580 65 aa5.45□□□□□ -1.54
ZNF3-206ENST00000415068 TNP1P09430 55 aa5.44□□□□□ -1.54
ZNF3-206ENST00000415068 SVIPQ8NHG7 77 aa5.44□□□□□ -1.54
ZNF3-206ENST00000415068 PP632Q6XCG6 107 aa5.34□□□□□ -1.55
ZNF3-206ENST00000415068 KRTAP9-2Q9BYQ4 174 aa5.34□□□□□ -1.55
ZNF3-206ENST00000415068 USH2AO75445 5202 aa5.34□□□□□ -1.55
ZNF3-206ENST00000415068 KRTAP10-12P60413 245 aa5.31□□□□□ -1.56
ZNF3-206ENST00000415068 PRAC1Q96KF2 57 aa5.31□□□□□ -1.56
ZNF3-206ENST00000415068 KRTAP10-7P60409 375 aaPredicted RBP5.25□□□□□ -1.57
ZNF3-206ENST00000415068 SSPOA2VEC9 5147 aa5.22□□□□□ -1.57
ZNF3-206ENST00000415068 KRTAP8-1Q8IUC2 63 aa5.18□□□□□ -1.58
ZNF3-206ENST00000415068 CRCT1Q9UGL9 99 aa5.18□□□□□ -1.58
ZNF3-206ENST00000415068 LCE3AQ5TA76 89 aa5.14□□□□□ -1.59
ZNF3-206ENST00000415068 KRTAP4-8A0A0G2JLE6 195 aa5.04□□□□□ -1.6
ZNF3-206ENST00000415068 KRTAP4-8Q9BYQ9 185 aa5.04□□□□□ -1.6
ZNF3-206ENST00000415068 FCGBPQ9Y6R7 5405 aaPredicted RBP5.02□□□□□ -1.61
ZNF3-206ENST00000415068 KRTAP12-3P60328 96 aa5□□□□□ -1.61
ZNF3-206ENST00000415068 KRTAP19-4Q3LI73 84 aa4.98□□□□□ -1.61
ZNF3-206ENST00000415068 FSIP2Q5CZC0 6907 aa4.97□□□□□ -1.61
ZNF3-206ENST00000415068 H3BS24 57 aa4.96□□□□□ -1.62
ZNF3-206ENST00000415068 KRTAP19-5Q3LI72 72 aa4.95□□□□□ -1.62
ZNF3-206ENST00000415068 KRTAP19-7Q3SYF9 63 aa4.95□□□□□ -1.62
ZNF3-206ENST00000415068 KRTAP9-6A0A140TA67 174 aa4.94□□□□□ -1.62
ZNF3-206ENST00000415068 KRTAP15-1Q3LI76 137 aa4.92□□□□□ -1.62
ZNF3-206ENST00000415068 LOC100996750A0A140TA64 210 aa4.9□□□□□ -1.63
ZNF3-206ENST00000415068 KRTAP4-6Q9BYQ5 205 aa4.9□□□□□ -1.63
ZNF3-206ENST00000415068 MT1EP04732 61 aa4.85□□□□□ -1.63
ZNF3-206ENST00000415068 KRTAP5-9P26371 169 aa4.83□□□□□ -1.64
ZNF3-206ENST00000415068 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.78□□□□□ -1.64
ZNF3-206ENST00000415068 KRTAP6-3Q3LI67 103 aa4.76□□□□□ -1.65
ZNF3-206ENST00000415068 KMT2DO14686 5537 aa4.76□□□□□ -1.65
ZNF3-206ENST00000415068 MT1LQ93083 61 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms