RNA–Protein interactions for RNA: ENST00000414802.5

CNOT4-204, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-204ENST00000414802 MT1HP80294 61 aa6.52□□□□□ -1.37
CNOT4-204ENST00000414802 KRTAP3-1Q9BYR8 98 aa6.51□□□□□ -1.37
CNOT4-204ENST00000414802 NDUFC1O43677 76 aa6.5□□□□□ -1.37
CNOT4-204ENST00000414802 LCE3BQ5TA77 95 aa6.5□□□□□ -1.37
CNOT4-204ENST00000414802 H1FX-AS1Q4G0G2 97 aa6.47□□□□□ -1.37
CNOT4-204ENST00000414802 TMEM258P61165 79 aa6.46□□□□□ -1.37
CNOT4-204ENST00000414802 M0R2T5 61 aa6.44□□□□□ -1.38
CNOT4-204ENST00000414802 KRTAP19-1Q8IUB9 90 aa6.44□□□□□ -1.38
CNOT4-204ENST00000414802 CYSTM1Q9H1C7 97 aa6.43□□□□□ -1.38
CNOT4-204ENST00000414802 H7BZZ5 65 aa6.39□□□□□ -1.39
CNOT4-204ENST00000414802 ATP5EP56381 51 aaPredicted RBP6.39□□□□□ -1.39
CNOT4-204ENST00000414802 S4R3F8 94 aa6.38□□□□□ -1.39
CNOT4-204ENST00000414802 DMAC1Q96GE9 116 aa6.37□□□□□ -1.39
CNOT4-204ENST00000414802 A8MUN3 132 aa6.36□□□□□ -1.39
CNOT4-204ENST00000414802 LCA10Q71F78 164 aa6.36□□□□□ -1.39
CNOT4-204ENST00000414802 KRTAP9-9Q9BYP9 154 aa6.36□□□□□ -1.39
CNOT4-204ENST00000414802 KRTAP9-4Q9BYQ2 154 aa6.36□□□□□ -1.39
CNOT4-204ENST00000414802 RPS28P62857 69 aaKnown RBP6.33□□□□□ -1.4
CNOT4-204ENST00000414802 KRTAP10-6P60371 365 aaPredicted RBP6.33□□□□□ -1.4
CNOT4-204ENST00000414802 SPANXA2-OT1Q8N9U9 137 aa6.33□□□□□ -1.4
CNOT4-204ENST00000414802 ACYP2P14621 99 aa6.27□□□□□ -1.41
CNOT4-204ENST00000414802 SERP1Q9Y6X1 66 aa6.26□□□□□ -1.41
CNOT4-204ENST00000414802 KRTAP4-8A0A0G2JLE6 195 aa6.26□□□□□ -1.41
CNOT4-204ENST00000414802 CSAG1Q6PB30 78 aa6.24□□□□□ -1.41
CNOT4-204ENST00000414802 KRTAP9-8Q9BYQ0 159 aa6.22□□□□□ -1.41
CNOT4-204ENST00000414802 CHKB-CPT1BH3BT56 60 aa6.2□□□□□ -1.42
CNOT4-204ENST00000414802 MT2AP02795 61 aa6.2□□□□□ -1.42
CNOT4-204ENST00000414802 COA5Q86WW8 74 aa6.19□□□□□ -1.42
CNOT4-204ENST00000414802 MT1FP04733 61 aa6.17□□□□□ -1.42
CNOT4-204ENST00000414802 SMIM26A0A096LP01 95 aa6.13□□□□□ -1.43
CNOT4-204ENST00000414802 KRTAP10-10P60014 251 aa6.12□□□□□ -1.43
CNOT4-204ENST00000414802 LCE1DQ5T752 114 aa6.1□□□□□ -1.43
CNOT4-204ENST00000414802 SPTSSBQ8NFR3 76 aa6.1□□□□□ -1.43
CNOT4-204ENST00000414802 ADM2Q7Z4H4 148 aa6.06□□□□□ -1.44
CNOT4-204ENST00000414802 KRTAP4-7Q9BYR0 210 aa6.04□□□□□ -1.44
CNOT4-204ENST00000414802 H0YAA0 97 aa6.04□□□□□ -1.44
CNOT4-204ENST00000414802 V9GYY9 64 aa6.02□□□□□ -1.45
CNOT4-204ENST00000414802 KRTAP9-3Q9BYQ3 159 aa6.01□□□□□ -1.45
CNOT4-204ENST00000414802 P0C880 135 aa6□□□□□ -1.45
CNOT4-204ENST00000414802 KRTAP19-4Q3LI73 84 aa5.99□□□□□ -1.45
CNOT4-204ENST00000414802 USH2AO75445 5202 aa5.98□□□□□ -1.45
CNOT4-204ENST00000414802 Q1T7F1 81 aa5.97□□□□□ -1.45
CNOT4-204ENST00000414802 KRTAP4-9Q9BYQ8 210 aa5.92□□□□□ -1.46
CNOT4-204ENST00000414802 CRIPTQ9P021 101 aa5.88□□□□□ -1.47
CNOT4-204ENST00000414802 LCE4AQ5TA78 99 aa5.87□□□□□ -1.47
CNOT4-204ENST00000414802 SPRR2GQ9BYE4 73 aa5.87□□□□□ -1.47
CNOT4-204ENST00000414802 H3BS24 57 aa5.86□□□□□ -1.47
CNOT4-204ENST00000414802 SEC61GP60059 68 aa5.86□□□□□ -1.47
CNOT4-204ENST00000414802 LINC01558Q9Y6Z2 57 aa5.86□□□□□ -1.47
CNOT4-204ENST00000414802 SSPOA2VEC9 5147 aa5.86□□□□□ -1.47
CNOT4-204ENST00000414802 M0QZ58 72 aa5.85□□□□□ -1.47
CNOT4-204ENST00000414802 R4GN34 69 aa5.85□□□□□ -1.47
CNOT4-204ENST00000414802 FSIP2Q5CZC0 6907 aa5.84□□□□□ -1.48
CNOT4-204ENST00000414802 A0A1B0GU69 56 aa5.83□□□□□ -1.48
CNOT4-204ENST00000414802 PRR15LQ9BU68 103 aa5.79□□□□□ -1.48
CNOT4-204ENST00000414802 KRTAP13-4Q3LI77 160 aa5.79□□□□□ -1.48
CNOT4-204ENST00000414802 KRTAP9-7A8MTY7 169 aa5.78□□□□□ -1.48
CNOT4-204ENST00000414802 PSPHP1O15172 72 aa5.78□□□□□ -1.48
CNOT4-204ENST00000414802 KRTAP19-8Q3LI54 63 aa5.77□□□□□ -1.49
CNOT4-204ENST00000414802 LINC01554Q52M75 96 aa5.77□□□□□ -1.49
CNOT4-204ENST00000414802 KRTAP4-2Q9BYR5 136 aa5.77□□□□□ -1.49
CNOT4-204ENST00000414802 MT1BP07438 61 aa5.75□□□□□ -1.49
CNOT4-204ENST00000414802 Q5VV11 94 aa5.75□□□□□ -1.49
CNOT4-204ENST00000414802 A0A1B0GU33 70 aa5.75□□□□□ -1.49
CNOT4-204ENST00000414802 SPATA8Q6RVD6 105 aa5.72□□□□□ -1.49
CNOT4-204ENST00000414802 KRTAP4-11Q9BYQ6 195 aa5.7□□□□□ -1.5
CNOT4-204ENST00000414802 CRCT1Q9UGL9 99 aa5.68□□□□□ -1.5
CNOT4-204ENST00000414802 BRK1Q8WUW1 75 aa5.66□□□□□ -1.5
CNOT4-204ENST00000414802 A0A0D9SG42 100 aa5.66□□□□□ -1.5
CNOT4-204ENST00000414802 A6NED7 52 aa5.66□□□□□ -1.5
CNOT4-204ENST00000414802 LCE5AQ5TCM9 118 aa5.66□□□□□ -1.5
CNOT4-204ENST00000414802 PRO0628Q9UI54 55 aa5.64□□□□□ -1.51
CNOT4-204ENST00000414802 PLAC4Q8WY50 150 aa5.61□□□□□ -1.51
CNOT4-204ENST00000414802 FCGBPQ9Y6R7 5405 aaPredicted RBP5.6□□□□□ -1.51
CNOT4-204ENST00000414802 A8MU10 97 aa5.6□□□□□ -1.51
CNOT4-204ENST00000414802 UQCR11O14957 56 aa5.6□□□□□ -1.51
CNOT4-204ENST00000414802 KRTAP19-6Q3LI70 58 aa5.59□□□□□ -1.51
CNOT4-204ENST00000414802 CDC42SE1Q9NRR8 79 aa5.59□□□□□ -1.51
CNOT4-204ENST00000414802 A6NN06 94 aa5.56□□□□□ -1.52
CNOT4-204ENST00000414802 SPINT4Q6UDR6 99 aa5.53□□□□□ -1.52
CNOT4-204ENST00000414802 KRTAP12-1P59990 96 aa5.52□□□□□ -1.53
CNOT4-204ENST00000414802 MIR22HGQ0VDD5 57 aa5.52□□□□□ -1.53
CNOT4-204ENST00000414802 KRTAP10-5P60370 271 aa5.51□□□□□ -1.53
CNOT4-204ENST00000414802 KRTAP12-2P59991 146 aa5.5□□□□□ -1.53
CNOT4-204ENST00000414802 MT1XP80297 61 aa5.5□□□□□ -1.53
CNOT4-204ENST00000414802 CAMK2N1Q7Z7J9 78 aa5.45□□□□□ -1.54
CNOT4-204ENST00000414802 SVIPQ8NHG7 77 aa5.43□□□□□ -1.54
CNOT4-204ENST00000414802 PRO2289Q9P1D8 64 aa5.42□□□□□ -1.54
CNOT4-204ENST00000414802 PMAIP1Q13794 54 aa5.38□□□□□ -1.55
CNOT4-204ENST00000414802 MACF1Q9UPN3 7388 aaKnown RBP5.36□□□□□ -1.55
CNOT4-204ENST00000414802 K7ERS5 55 aa5.34□□□□□ -1.56
CNOT4-204ENST00000414802 KMT2DO14686 5537 aa5.31□□□□□ -1.56
CNOT4-204ENST00000414802 KRTAP10-7P60409 375 aaPredicted RBP5.28□□□□□ -1.56
CNOT4-204ENST00000414802 C10orf95Q9H7T3 257 aa5.25□□□□□ -1.57
CNOT4-204ENST00000414802 SYNE2Q8WXH0 6885 aaKnown RBP5.24□□□□□ -1.57
CNOT4-204ENST00000414802 KTN1-AS1Q86SY8 53 aa5.21□□□□□ -1.58
CNOT4-204ENST00000414802 KRTAP10-12P60413 245 aa5.19□□□□□ -1.58
CNOT4-204ENST00000414802 TNP1P09430 55 aa5.11□□□□□ -1.59
CNOT4-204ENST00000414802 KRTAP5-3Q6L8H2 238 aa5.1□□□□□ -1.59
CNOT4-204ENST00000414802 KRTAP8-1Q8IUC2 63 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 179.5 ms