RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.19□□□□□ -1.58
RFFL-204ENST00000414419 H0Y9P7 68 aa5.19□□□□□ -1.58
RFFL-204ENST00000414419 A0A087WVE0 104 aa5.18□□□□□ -1.58
RFFL-204ENST00000414419 SMIM20Q8N5G0 67 aa5.17□□□□□ -1.58
RFFL-204ENST00000414419 KRTAP19-6Q3LI70 58 aa5.15□□□□□ -1.59
RFFL-204ENST00000414419 FCGBPQ9Y6R7 5405 aaPredicted RBP5.13□□□□□ -1.59
RFFL-204ENST00000414419 KRTAP9-7A8MTY7 169 aa5.12□□□□□ -1.59
RFFL-204ENST00000414419 MP68P56378 58 aa5.12□□□□□ -1.59
RFFL-204ENST00000414419 LINC00208Q96KT6 92 aa5.12□□□□□ -1.59
RFFL-204ENST00000414419 COX7CP15954 63 aa5.11□□□□□ -1.59
RFFL-204ENST00000414419 RPS28P62857 69 aaKnown RBP5.11□□□□□ -1.59
RFFL-204ENST00000414419 KRTAP3-3Q9BYR6 98 aa5.1□□□□□ -1.59
RFFL-204ENST00000414419 NDUFC1O43677 76 aa5.09□□□□□ -1.59
RFFL-204ENST00000414419 OCR1Q9BZK8 76 aa5.08□□□□□ -1.6
RFFL-204ENST00000414419 A8MUN3 132 aa5.07□□□□□ -1.6
RFFL-204ENST00000414419 KLKP1Q107X0 134 aa5.07□□□□□ -1.6
RFFL-204ENST00000414419 TMEM258P61165 79 aa5.06□□□□□ -1.6
RFFL-204ENST00000414419 SERP2Q8N6R1 65 aa5.05□□□□□ -1.6
RFFL-204ENST00000414419 Q5VV11 94 aa5.04□□□□□ -1.6
RFFL-204ENST00000414419 SPRR2GQ9BYE4 73 aa5.04□□□□□ -1.6
RFFL-204ENST00000414419 H3BPC8 53 aa5.03□□□□□ -1.6
RFFL-204ENST00000414419 CRIPTQ9P021 101 aa5.03□□□□□ -1.6
RFFL-204ENST00000414419 KRTAP19-8Q3LI54 63 aa5□□□□□ -1.61
RFFL-204ENST00000414419 A6NN06 94 aa4.98□□□□□ -1.61
RFFL-204ENST00000414419 H0YAA0 97 aa4.98□□□□□ -1.61
RFFL-204ENST00000414419 MT1BP07438 61 aa4.98□□□□□ -1.61
RFFL-204ENST00000414419 CYSTM1Q9H1C7 97 aa4.97□□□□□ -1.61
RFFL-204ENST00000414419 ADM2Q7Z4H4 148 aa4.96□□□□□ -1.62
RFFL-204ENST00000414419 MACF1Q9UPN3 7388 aaKnown RBP4.95□□□□□ -1.62
RFFL-204ENST00000414419 TRAV7A0A075B6U4 112 aa4.92□□□□□ -1.62
RFFL-204ENST00000414419 DMAC1Q96GE9 116 aa4.92□□□□□ -1.62
RFFL-204ENST00000414419 SERP1Q9Y6X1 66 aa4.91□□□□□ -1.62
RFFL-204ENST00000414419 SYNE2Q8WXH0 6885 aaKnown RBP4.9□□□□□ -1.63
RFFL-204ENST00000414419 ATP5EP56381 51 aaPredicted RBP4.88□□□□□ -1.63
RFFL-204ENST00000414419 KRTAP10-5P60370 271 aa4.88□□□□□ -1.63
RFFL-204ENST00000414419 C20orf197Q8N268 126 aa4.88□□□□□ -1.63
RFFL-204ENST00000414419 H7BZZ5 65 aa4.87□□□□□ -1.63
RFFL-204ENST00000414419 KRTAP6-3Q3LI67 103 aa4.87□□□□□ -1.63
RFFL-204ENST00000414419 ACYP2P14621 99 aa4.86□□□□□ -1.63
RFFL-204ENST00000414419 R4GN34 69 aa4.85□□□□□ -1.63
RFFL-204ENST00000414419 SMIM26A0A096LP01 95 aa4.84□□□□□ -1.63
RFFL-204ENST00000414419 PLAC4Q8WY50 150 aa4.82□□□□□ -1.64
RFFL-204ENST00000414419 PRO0628Q9UI54 55 aa4.82□□□□□ -1.64
RFFL-204ENST00000414419 P0C880 135 aa4.81□□□□□ -1.64
RFFL-204ENST00000414419 SPTSSBQ8NFR3 76 aa4.81□□□□□ -1.64
RFFL-204ENST00000414419 M0QZ58 72 aa4.8□□□□□ -1.64
RFFL-204ENST00000414419 CHKB-CPT1BH3BT56 60 aa4.78□□□□□ -1.64
RFFL-204ENST00000414419 PRO2289Q9P1D8 64 aa4.78□□□□□ -1.64
RFFL-204ENST00000414419 SNURFQ9Y675 71 aa4.78□□□□□ -1.64
RFFL-204ENST00000414419 LINC01554Q52M75 96 aa4.75□□□□□ -1.65
RFFL-204ENST00000414419 KRTAP3-2Q9BYR7 98 aa4.75□□□□□ -1.65
RFFL-204ENST00000414419 SPANXA2-OT1Q8N9U9 137 aa4.71□□□□□ -1.66
RFFL-204ENST00000414419 MT1XP80297 61 aa4.69□□□□□ -1.66
RFFL-204ENST00000414419 KRTAP5-9P26371 169 aa4.65□□□□□ -1.67
RFFL-204ENST00000414419 Q1T7F1 81 aa4.64□□□□□ -1.67
RFFL-204ENST00000414419 BRK1Q8WUW1 75 aa4.63□□□□□ -1.67
RFFL-204ENST00000414419 MUC12Q9UKN1 5478 aa4.58□□□□□ -1.68
RFFL-204ENST00000414419 KRTAP12-2P59991 146 aa4.58□□□□□ -1.68
RFFL-204ENST00000414419 COA5Q86WW8 74 aa4.58□□□□□ -1.68
RFFL-204ENST00000414419 V9GYY9 64 aa4.58□□□□□ -1.68
RFFL-204ENST00000414419 NEBP20929 6669 aa4.57□□□□□ -1.68
RFFL-204ENST00000414419 KRTAP8-1Q8IUC2 63 aa4.57□□□□□ -1.68
RFFL-204ENST00000414419 SPRR2FQ96RM1 72 aa4.57□□□□□ -1.68
RFFL-204ENST00000414419 SEC61GP60059 68 aa4.55□□□□□ -1.68
RFFL-204ENST00000414419 KMT2DO14686 5537 aa4.53□□□□□ -1.68
RFFL-204ENST00000414419 KRTAP20-1Q3LI63 56 aa4.51□□□□□ -1.69
RFFL-204ENST00000414419 PMAIP1Q13794 54 aa4.5□□□□□ -1.69
RFFL-204ENST00000414419 KRTAP13-4Q3LI77 160 aa4.5□□□□□ -1.69
RFFL-204ENST00000414419 SPRR2EP22531 72 aa4.49□□□□□ -1.69
RFFL-204ENST00000414419 SPRR2BP35325 72 aa4.49□□□□□ -1.69
RFFL-204ENST00000414419 SPRR2AP35326 72 aa4.49□□□□□ -1.69
RFFL-204ENST00000414419 CAMK2N1Q7Z7J9 78 aa4.49□□□□□ -1.69
RFFL-204ENST00000414419 KRTAP4-8A0A0G2JLE6 195 aa4.48□□□□□ -1.69
RFFL-204ENST00000414419 KRTAP10-7P60409 375 aaPredicted RBP4.48□□□□□ -1.69
RFFL-204ENST00000414419 KRTAP4-8Q9BYQ9 185 aa4.48□□□□□ -1.69
RFFL-204ENST00000414419 PSPHP1O15172 72 aa4.46□□□□□ -1.7
RFFL-204ENST00000414419 KRTAP10-12P60413 245 aa4.46□□□□□ -1.7
RFFL-204ENST00000414419 MDN1Q9NU22 5596 aa4.45□□□□□ -1.7
RFFL-204ENST00000414419 A0A0D9SG42 100 aa4.42□□□□□ -1.7
RFFL-204ENST00000414419 A0A1B0GU33 70 aa4.42□□□□□ -1.7
RFFL-204ENST00000414419 KRTAP2-3P0C7H8 128 aa4.41□□□□□ -1.7
RFFL-204ENST00000414419 KRTAP2-4Q9BYR9 128 aa4.41□□□□□ -1.7
RFFL-204ENST00000414419 LCE1AQ5T7P2 110 aa4.4□□□□□ -1.71
RFFL-204ENST00000414419 SPATA8Q6RVD6 105 aa4.4□□□□□ -1.71
RFFL-204ENST00000414419 KTN1-AS1Q86SY8 53 aa4.4□□□□□ -1.71
RFFL-204ENST00000414419 PRR15LQ9BU68 103 aa4.4□□□□□ -1.71
RFFL-204ENST00000414419 A0A1B0GU69 56 aa4.38□□□□□ -1.71
RFFL-204ENST00000414419 SPINT4Q6UDR6 99 aa4.38□□□□□ -1.71
RFFL-204ENST00000414419 LINC01558Q9Y6Z2 57 aa4.38□□□□□ -1.71
RFFL-204ENST00000414419 CDC42SE1Q9NRR8 79 aa4.37□□□□□ -1.71
RFFL-204ENST00000414419 A6NED7 52 aa4.34□□□□□ -1.71
RFFL-204ENST00000414419 A8MU10 97 aa4.34□□□□□ -1.71
RFFL-204ENST00000414419 SPRR2DP22532 72 aa4.34□□□□□ -1.71
RFFL-204ENST00000414419 KRTAP12-1P59990 96 aa4.29□□□□□ -1.72
RFFL-204ENST00000414419 KRTAP2-2Q9BYT5 123 aa4.27□□□□□ -1.73
RFFL-204ENST00000414419 KRTAP2-1Q9BYU5 128 aa4.27□□□□□ -1.73
RFFL-204ENST00000414419 LCE3BQ5TA77 95 aa4.21□□□□□ -1.74
RFFL-204ENST00000414419 KRTAP19-7Q3SYF9 63 aa4.18□□□□□ -1.74
RFFL-204ENST00000414419 MT1EP04732 61 aa4.16□□□□□ -1.74
RFFL-204ENST00000414419 TNP1P09430 55 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms