RNA–Protein interactions for RNA: ENST00000414069.2

SPRN-201, Transcript of shadow of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPRN, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRN-201ENST00000414069 FAT3Q8TDW7 4589 aa11.2□□□□□ -0.62
SPRN-201ENST00000414069 RPS29P62273 56 aaKnown RBP11.17□□□□□ -0.62
SPRN-201ENST00000414069 KRTAP17-1Q9BYP8 105 aa11.17□□□□□ -0.62
SPRN-201ENST00000414069 TNXBP22105 4242 aa11.16□□□□□ -0.62
SPRN-201ENST00000414069 SPINT4Q6UDR6 99 aa11.12□□□□□ -0.63
SPRN-201ENST00000414069 RYR1P21817 5038 aa11.12□□□□□ -0.63
SPRN-201ENST00000414069 C20orf166-AS1Q96NR2 134 aa11.11□□□□□ -0.63
SPRN-201ENST00000414069 A0A1B0GU33 70 aa11.1□□□□□ -0.63
SPRN-201ENST00000414069 EPPK1P58107 5090 aaKnown RBP11.08□□□□□ -0.64
SPRN-201ENST00000414069 KRTAP3-1Q9BYR8 98 aa11.06□□□□□ -0.64
SPRN-201ENST00000414069 NDUFAF8A1L188 74 aa11.03□□□□□ -0.64
SPRN-201ENST00000414069 LPAP08519 4548 aa10.97□□□□□ -0.65
SPRN-201ENST00000414069 KRTAP10-8P60410 259 aa10.95□□□□□ -0.66
SPRN-201ENST00000414069 K7ERS5 55 aa10.94□□□□□ -0.66
SPRN-201ENST00000414069 H1FX-AS1Q4G0G2 97 aa10.94□□□□□ -0.66
SPRN-201ENST00000414069 LRP2P98164 4655 aa10.9□□□□□ -0.66
SPRN-201ENST00000414069 C10orf95Q9H7T3 257 aa10.89□□□□□ -0.67
SPRN-201ENST00000414069 ABCA13Q86UQ4 5058 aa10.84□□□□□ -0.67
SPRN-201ENST00000414069 A0A0D9SG42 100 aa10.84□□□□□ -0.67
SPRN-201ENST00000414069 XP32Q5T750 250 aa10.82□□□□□ -0.68
SPRN-201ENST00000414069 TPRXLQ17RH7 258 aa10.8□□□□□ -0.68
SPRN-201ENST00000414069 COX6B2Q6YFQ2 88 aa10.8□□□□□ -0.68
SPRN-201ENST00000414069 MT1HL1P0DM35 61 aa10.75□□□□□ -0.69
SPRN-201ENST00000414069 RPL37P61927 97 aaKnown RBP10.73□□□□□ -0.69
SPRN-201ENST00000414069 A0A0A0MQY5 61 aa10.73□□□□□ -0.69
SPRN-201ENST00000414069 KRTAP4-5Q9BYR2 181 aa10.72□□□□□ -0.69
SPRN-201ENST00000414069 KRTAP15-1Q3LI76 137 aa10.58□□□□□ -0.72
SPRN-201ENST00000414069 KRTAP3-3Q9BYR6 98 aa10.55□□□□□ -0.72
SPRN-201ENST00000414069 KRTAP13-4Q3LI77 160 aa10.52□□□□□ -0.73
SPRN-201ENST00000414069 S4R3F8 94 aa10.51□□□□□ -0.73
SPRN-201ENST00000414069 HERC2O95714 4834 aa10.44□□□□□ -0.74
SPRN-201ENST00000414069 KRTAP10-6P60371 365 aaPredicted RBP10.4□□□□□ -0.74
SPRN-201ENST00000414069 MUC2Q02817 5179 aa10.4□□□□□ -0.75
SPRN-201ENST00000414069 KRTAP3-2Q9BYR7 98 aa10.32□□□□□ -0.76
SPRN-201ENST00000414069 J3QL48 77 aa10.29□□□□□ -0.76
SPRN-201ENST00000414069 KRTAP12-2P59991 146 aa10.24□□□□□ -0.77
SPRN-201ENST00000414069 LUZP6Q538Z0 58 aa10.24□□□□□ -0.77
SPRN-201ENST00000414069 HERC1Q15751 4861 aa10.16□□□□□ -0.78
SPRN-201ENST00000414069 KRTAP4-1Q9BYQ7 146 aa10.11□□□□□ -0.79
SPRN-201ENST00000414069 MUC17Q685J3 4493 aa10.08□□□□□ -0.8
SPRN-201ENST00000414069 PCLOQ9Y6V0 5065 aa10□□□□□ -0.81
SPRN-201ENST00000414069 SEC61BP60468 96 aaKnown RBP10□□□□□ -0.81
SPRN-201ENST00000414069 KRTAP12-1P59990 96 aa9.99□□□□□ -0.81
SPRN-201ENST00000414069 BIRC6Q9NR09 4857 aa9.95□□□□□ -0.82
SPRN-201ENST00000414069 M0QZ58 72 aa9.92□□□□□ -0.82
SPRN-201ENST00000414069 LORP23490 312 aaPredicted RBP9.89□□□□□ -0.83
SPRN-201ENST00000414069 FAT4Q6V0I7 4981 aa9.88□□□□□ -0.83
SPRN-201ENST00000414069 R4GN34 69 aa9.85□□□□□ -0.83
SPRN-201ENST00000414069 PLAC4Q8WY50 150 aa9.85□□□□□ -0.83
SPRN-201ENST00000414069 RNF213Q63HN8 5207 aa9.8□□□□□ -0.84
SPRN-201ENST00000414069 HMCN2Q8NDA2 5059 aa9.69□□□□□ -0.86
SPRN-201ENST00000414069 KRTAP19-2Q3LHN2 52 aa9.62□□□□□ -0.87
SPRN-201ENST00000414069 UBR4Q5T4S7 5183 aa9.61□□□□□ -0.87
SPRN-201ENST00000414069 FLGP20930 4061 aaPredicted RBP9.57□□□□□ -0.88
SPRN-201ENST00000414069 CAMK2N1Q7Z7J9 78 aa9.4□□□□□ -0.91
SPRN-201ENST00000414069 M0R2T5 61 aa9.34□□□□□ -0.91
SPRN-201ENST00000414069 LCE2CQ5TA81 110 aa9.21□□□□□ -0.93
SPRN-201ENST00000414069 MT1HP80294 61 aa9.03□□□□□ -0.96
SPRN-201ENST00000414069 PP632Q6XCG6 107 aa8.99□□□□□ -0.97
SPRN-201ENST00000414069 KRTAP10-10P60014 251 aa8.99□□□□□ -0.97
SPRN-201ENST00000414069 KRTAP19-1Q8IUB9 90 aa8.91□□□□□ -0.98
SPRN-201ENST00000414069 MT1FP04733 61 aa8.9□□□□□ -0.98
SPRN-201ENST00000414069 MT2AP02795 61 aa8.85□□□□□ -0.99
SPRN-201ENST00000414069 TNP1P09430 55 aa8.83□□□□□ -1
SPRN-201ENST00000414069 SPRR2GQ9BYE4 73 aa8.78□□□□□ -1
SPRN-201ENST00000414069 KRTAP9-8Q9BYQ0 159 aa8.76□□□□□ -1.01
SPRN-201ENST00000414069 USH2AO75445 5202 aa8.72□□□□□ -1.01
SPRN-201ENST00000414069 PRO2289Q9P1D8 64 aa8.71□□□□□ -1.01
SPRN-201ENST00000414069 SPRR5A0A1B0GTR4 108 aa8.64□□□□□ -1.03
SPRN-201ENST00000414069 LCE3AQ5TA76 89 aa8.51□□□□□ -1.05
SPRN-201ENST00000414069 MT1BP07438 61 aa8.47□□□□□ -1.05
SPRN-201ENST00000414069 KMT2DO14686 5537 aa8.44□□□□□ -1.06
SPRN-201ENST00000414069 KRTAP10-5P60370 271 aa8.37□□□□□ -1.07
SPRN-201ENST00000414069 MT1XP80297 61 aa8.37□□□□□ -1.07
SPRN-201ENST00000414069 KRTAP19-8Q3LI54 63 aa8.36□□□□□ -1.07
SPRN-201ENST00000414069 KRTAP9-3Q9BYQ3 159 aa8.36□□□□□ -1.07
SPRN-201ENST00000414069 FSIP2Q5CZC0 6907 aa8.34□□□□□ -1.07
SPRN-201ENST00000414069 INE1O15225 51 aa8.31□□□□□ -1.08
SPRN-201ENST00000414069 KRTAP10-7P60409 375 aaPredicted RBP8.27□□□□□ -1.09
SPRN-201ENST00000414069 KRTAP23-1A1A580 65 aa8.2□□□□□ -1.1
SPRN-201ENST00000414069 LCE2BO14633 110 aa8.2□□□□□ -1.1
SPRN-201ENST00000414069 KRTAP10-12P60413 245 aa8.17□□□□□ -1.1
SPRN-201ENST00000414069 KRTAP12-3P60328 96 aa8.04□□□□□ -1.12
SPRN-201ENST00000414069 KRTAP8-1Q8IUC2 63 aa8.03□□□□□ -1.12
SPRN-201ENST00000414069 LCE2AQ5TA79 106 aaPredicted RBP8□□□□□ -1.13
SPRN-201ENST00000414069 KRTAP4-8A0A0G2JLE6 195 aa7.95□□□□□ -1.14
SPRN-201ENST00000414069 KRTAP4-8Q9BYQ9 185 aa7.95□□□□□ -1.14
SPRN-201ENST00000414069 KRTAP19-5Q3LI72 72 aa7.85□□□□□ -1.15
SPRN-201ENST00000414069 SSPOA2VEC9 5147 aa7.81□□□□□ -1.16
SPRN-201ENST00000414069 KRTAP4-7Q9BYR0 210 aa7.58□□□□□ -1.2
SPRN-201ENST00000414069 MUC12Q9UKN1 5478 aa7.5□□□□□ -1.21
SPRN-201ENST00000414069 LCE3CQ5T5A8 94 aa7.49□□□□□ -1.21
SPRN-201ENST00000414069 FCGBPQ9Y6R7 5405 aaPredicted RBP7.48□□□□□ -1.21
SPRN-201ENST00000414069 KRTAP19-7Q3SYF9 63 aa7.45□□□□□ -1.22
SPRN-201ENST00000414069 DSTQ03001 7570 aaKnown RBP7.42□□□□□ -1.22
SPRN-201ENST00000414069 KRTAP9-6A8MVA2 160 aa7.36□□□□□ -1.23
SPRN-201ENST00000414069 MT1EP04732 61 aa7.23□□□□□ -1.25
SPRN-201ENST00000414069 MT1LQ93083 61 aa7.2□□□□□ -1.26
SPRN-201ENST00000414069 KRTAP19-6Q3LI70 58 aa7.18□□□□□ -1.26
SPRN-201ENST00000414069 KRTAP4-3Q9BYR4 195 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms