RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 KRTAP3-3Q9BYR6 98 aa7.27□□□□□ -1.25
TRAPPC12-203ENST00000411973 CRCT1Q9UGL9 99 aa7.27□□□□□ -1.25
TRAPPC12-203ENST00000411973 KRTAP9-3Q9BYQ3 159 aa7.25□□□□□ -1.25
TRAPPC12-203ENST00000411973 SERP2Q8N6R1 65 aa7.23□□□□□ -1.25
TRAPPC12-203ENST00000411973 DMAC1Q96GE9 116 aa7.2□□□□□ -1.26
TRAPPC12-203ENST00000411973 NDUFC1O43677 76 aa7.17□□□□□ -1.26
TRAPPC12-203ENST00000411973 SNURFQ9Y675 71 aa7.15□□□□□ -1.26
TRAPPC12-203ENST00000411973 LCE2BO14633 110 aa7.14□□□□□ -1.27
TRAPPC12-203ENST00000411973 C20orf197Q8N268 126 aa7.14□□□□□ -1.27
TRAPPC12-203ENST00000411973 USH2AO75445 5202 aa7.14□□□□□ -1.27
TRAPPC12-203ENST00000411973 H0YAA0 97 aa7.07□□□□□ -1.28
TRAPPC12-203ENST00000411973 ACYP2P14621 99 aa7.07□□□□□ -1.28
TRAPPC12-203ENST00000411973 COX7CP15954 63 aa7.07□□□□□ -1.28
TRAPPC12-203ENST00000411973 SPANXA2-OT1Q8N9U9 137 aa7.06□□□□□ -1.28
TRAPPC12-203ENST00000411973 SSPOA2VEC9 5147 aa7.04□□□□□ -1.28
TRAPPC12-203ENST00000411973 KRTAP19-1Q8IUB9 90 aa7.01□□□□□ -1.29
TRAPPC12-203ENST00000411973 SPRR2GQ9BYE4 73 aa6.98□□□□□ -1.29
TRAPPC12-203ENST00000411973 CRIPTQ9P021 101 aa6.98□□□□□ -1.29
TRAPPC12-203ENST00000411973 ADM2Q7Z4H4 148 aa6.96□□□□□ -1.3
TRAPPC12-203ENST00000411973 ANAPC13Q9BS18 74 aa6.96□□□□□ -1.3
TRAPPC12-203ENST00000411973 H7BZZ5 65 aa6.92□□□□□ -1.3
TRAPPC12-203ENST00000411973 SPTSSBQ8NFR3 76 aa6.92□□□□□ -1.3
TRAPPC12-203ENST00000411973 CHKB-CPT1BH3BT56 60 aa6.91□□□□□ -1.3
TRAPPC12-203ENST00000411973 CYSTM1Q9H1C7 97 aa6.91□□□□□ -1.3
TRAPPC12-203ENST00000411973 KRTAP19-8Q3LI54 63 aa6.88□□□□□ -1.31
TRAPPC12-203ENST00000411973 KRTAP3-2Q9BYR7 98 aa6.86□□□□□ -1.31
TRAPPC12-203ENST00000411973 KRTAP19-6Q3LI70 58 aa6.85□□□□□ -1.31
TRAPPC12-203ENST00000411973 P0C880 135 aa6.84□□□□□ -1.31
TRAPPC12-203ENST00000411973 MT1BP07438 61 aa6.83□□□□□ -1.32
TRAPPC12-203ENST00000411973 Q5VV11 94 aa6.83□□□□□ -1.32
TRAPPC12-203ENST00000411973 CCDC179H3BU77 68 aa6.82□□□□□ -1.32
TRAPPC12-203ENST00000411973 COA5Q86WW8 74 aa6.82□□□□□ -1.32
TRAPPC12-203ENST00000411973 FCGBPQ9Y6R7 5405 aaPredicted RBP6.79□□□□□ -1.32
TRAPPC12-203ENST00000411973 KRTAP9-7A8MTY7 169 aa6.76□□□□□ -1.33
TRAPPC12-203ENST00000411973 R4GN34 69 aa6.76□□□□□ -1.33
TRAPPC12-203ENST00000411973 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.75□□□□□ -1.33
TRAPPC12-203ENST00000411973 M0QZ58 72 aa6.71□□□□□ -1.34
TRAPPC12-203ENST00000411973 ATP5EP56381 51 aaPredicted RBP6.67□□□□□ -1.34
TRAPPC12-203ENST00000411973 MACF1Q9UPN3 7388 aaKnown RBP6.62□□□□□ -1.35
TRAPPC12-203ENST00000411973 A6NN06 94 aa6.62□□□□□ -1.35
TRAPPC12-203ENST00000411973 KRTAP10-5P60370 271 aa6.62□□□□□ -1.35
TRAPPC12-203ENST00000411973 TMEM258P61165 79 aa6.6□□□□□ -1.35
TRAPPC12-203ENST00000411973 SEC61GP60059 68 aa6.59□□□□□ -1.35
TRAPPC12-203ENST00000411973 PLAC4Q8WY50 150 aa6.59□□□□□ -1.35
TRAPPC12-203ENST00000411973 LINC01554Q52M75 96 aa6.58□□□□□ -1.36
TRAPPC12-203ENST00000411973 SERP1Q9Y6X1 66 aa6.57□□□□□ -1.36
TRAPPC12-203ENST00000411973 KRTAP13-4Q3LI77 160 aa6.51□□□□□ -1.37
TRAPPC12-203ENST00000411973 SYNE2Q8WXH0 6885 aaKnown RBP6.49□□□□□ -1.37
TRAPPC12-203ENST00000411973 MT1XP80297 61 aa6.48□□□□□ -1.37
TRAPPC12-203ENST00000411973 PRO2289Q9P1D8 64 aa6.48□□□□□ -1.37
TRAPPC12-203ENST00000411973 A0A1B0GU33 70 aa6.46□□□□□ -1.38
TRAPPC12-203ENST00000411973 A0A1B0GU69 56 aa6.46□□□□□ -1.38
TRAPPC12-203ENST00000411973 SPATA8Q6RVD6 105 aa6.38□□□□□ -1.39
TRAPPC12-203ENST00000411973 LINC01558Q9Y6Z2 57 aa6.38□□□□□ -1.39
TRAPPC12-203ENST00000411973 PRR15LQ9BU68 103 aa6.36□□□□□ -1.39
TRAPPC12-203ENST00000411973 A0A0D9SG42 100 aa6.32□□□□□ -1.4
TRAPPC12-203ENST00000411973 KRTAP6-3Q3LI67 103 aa6.32□□□□□ -1.4
TRAPPC12-203ENST00000411973 PCP4P48539 62 aa6.31□□□□□ -1.4
TRAPPC12-203ENST00000411973 KRTAP12-2P59991 146 aa6.28□□□□□ -1.4
TRAPPC12-203ENST00000411973 SMIM26A0A096LP01 95 aa6.27□□□□□ -1.41
TRAPPC12-203ENST00000411973 CAMK2N1Q7Z7J9 78 aa6.25□□□□□ -1.41
TRAPPC12-203ENST00000411973 KRTAP12-1P59990 96 aa6.23□□□□□ -1.41
TRAPPC12-203ENST00000411973 SPINT4Q6UDR6 99 aa6.21□□□□□ -1.42
TRAPPC12-203ENST00000411973 A8MU10 97 aa6.2□□□□□ -1.42
TRAPPC12-203ENST00000411973 V9GYY9 64 aa6.19□□□□□ -1.42
TRAPPC12-203ENST00000411973 KMT2DO14686 5537 aa6.19□□□□□ -1.42
TRAPPC12-203ENST00000411973 KRTAP10-7P60409 375 aaPredicted RBP6.18□□□□□ -1.42
TRAPPC12-203ENST00000411973 KRTAP5-9P26371 169 aa6.17□□□□□ -1.42
TRAPPC12-203ENST00000411973 KRTAP10-12P60413 245 aa6.17□□□□□ -1.42
TRAPPC12-203ENST00000411973 Q1T7F1 81 aa6.17□□□□□ -1.42
TRAPPC12-203ENST00000411973 UQCR11O14957 56 aa6.16□□□□□ -1.42
TRAPPC12-203ENST00000411973 RPS28P62857 69 aaKnown RBP6.13□□□□□ -1.43
TRAPPC12-203ENST00000411973 KRTAP4-8A0A0G2JLE6 195 aa6.09□□□□□ -1.43
TRAPPC12-203ENST00000411973 KRTAP8-1Q8IUC2 63 aa6.09□□□□□ -1.43
TRAPPC12-203ENST00000411973 KRTAP4-8Q9BYQ9 185 aa6.09□□□□□ -1.43
TRAPPC12-203ENST00000411973 MUC12Q9UKN1 5478 aa6.08□□□□□ -1.44
TRAPPC12-203ENST00000411973 PSPHP1O15172 72 aa6.08□□□□□ -1.44
TRAPPC12-203ENST00000411973 NEBP20929 6669 aa6.07□□□□□ -1.44
TRAPPC12-203ENST00000411973 MIR22HGQ0VDD5 57 aa6.03□□□□□ -1.44
TRAPPC12-203ENST00000411973 SPRR2FQ96RM1 72 aa6.01□□□□□ -1.45
TRAPPC12-203ENST00000411973 C10orf95Q9H7T3 257 aa5.94□□□□□ -1.46
TRAPPC12-203ENST00000411973 MDN1Q9NU22 5596 aa5.92□□□□□ -1.46
TRAPPC12-203ENST00000411973 KRTAP20-1Q3LI63 56 aa5.92□□□□□ -1.46
TRAPPC12-203ENST00000411973 A6NED7 52 aa5.89□□□□□ -1.47
TRAPPC12-203ENST00000411973 K7ERS5 55 aa5.87□□□□□ -1.47
TRAPPC12-203ENST00000411973 TNP1P09430 55 aa5.86□□□□□ -1.47
TRAPPC12-203ENST00000411973 SPRR2EP22531 72 aa5.85□□□□□ -1.47
TRAPPC12-203ENST00000411973 SPRR2BP35325 72 aa5.85□□□□□ -1.47
TRAPPC12-203ENST00000411973 SPRR2AP35326 72 aa5.85□□□□□ -1.47
TRAPPC12-203ENST00000411973 LCE1AQ5T7P2 110 aa5.84□□□□□ -1.47
TRAPPC12-203ENST00000411973 KRTAP19-7Q3SYF9 63 aa5.79□□□□□ -1.48
TRAPPC12-203ENST00000411973 KRTAP2-3P0C7H8 128 aa5.73□□□□□ -1.49
TRAPPC12-203ENST00000411973 KRTAP2-4Q9BYR9 128 aa5.73□□□□□ -1.49
TRAPPC12-203ENST00000411973 MT1EP04732 61 aa5.72□□□□□ -1.49
TRAPPC12-203ENST00000411973 LCE3AQ5TA76 89 aa5.72□□□□□ -1.49
TRAPPC12-203ENST00000411973 CDC42SE1Q9NRR8 79 aa5.71□□□□□ -1.5
TRAPPC12-203ENST00000411973 KRTAP19-5Q3LI72 72 aa5.7□□□□□ -1.5
TRAPPC12-203ENST00000411973 KRTAP25-1Q3LHN0 102 aa5.69□□□□□ -1.5
TRAPPC12-203ENST00000411973 SPRR2DP22532 72 aa5.65□□□□□ -1.5
TRAPPC12-203ENST00000411973 KRTAP19-3Q7Z4W3 81 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms