RNA–Protein interactions for RNA: ENST00000411792.1

RFC4-203, Transcript of replication factor C subunit 4, humanhuman

TSL 5

Gene RFC4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-203ENST00000411792 FCGBPQ9Y6R7 5405 aaPredicted RBP8.43□□□□□ -1.06
RFC4-203ENST00000411792 A8MUN3 132 aa8.41□□□□□ -1.06
RFC4-203ENST00000411792 K7ERU9 68 aa8.41□□□□□ -1.06
RFC4-203ENST00000411792 H3BPC8 53 aa8.39□□□□□ -1.07
RFC4-203ENST00000411792 NDUFC1O43677 76 aa8.38□□□□□ -1.07
RFC4-203ENST00000411792 KLKP1Q107X0 134 aa8.38□□□□□ -1.07
RFC4-203ENST00000411792 KRTAP3-3Q9BYR6 98 aa8.38□□□□□ -1.07
RFC4-203ENST00000411792 IMUPQ9GZP8 106 aa8.37□□□□□ -1.07
RFC4-203ENST00000411792 KRTAP19-6Q3LI70 58 aa8.32□□□□□ -1.08
RFC4-203ENST00000411792 MT-ATP8P03928 68 aa8.3□□□□□ -1.08
RFC4-203ENST00000411792 SMIM20Q8N5G0 67 aa8.26□□□□□ -1.09
RFC4-203ENST00000411792 SPRR2GQ9BYE4 73 aa8.23□□□□□ -1.09
RFC4-203ENST00000411792 CRIPTQ9P021 101 aa8.22□□□□□ -1.09
RFC4-203ENST00000411792 Q5VV11 94 aa8.21□□□□□ -1.1
RFC4-203ENST00000411792 TRAV7A0A075B6U4 112 aa8.2□□□□□ -1.1
RFC4-203ENST00000411792 H0YAA0 97 aa8.2□□□□□ -1.1
RFC4-203ENST00000411792 DMAC1Q96GE9 116 aa8.19□□□□□ -1.1
RFC4-203ENST00000411792 KRTAP19-8Q3LI54 63 aa8.14□□□□□ -1.11
RFC4-203ENST00000411792 ADM2Q7Z4H4 148 aa8.14□□□□□ -1.11
RFC4-203ENST00000411792 MACF1Q9UPN3 7388 aaKnown RBP8.13□□□□□ -1.11
RFC4-203ENST00000411792 MT1BP07438 61 aa8.11□□□□□ -1.11
RFC4-203ENST00000411792 SYNE2Q8WXH0 6885 aaKnown RBP8.06□□□□□ -1.12
RFC4-203ENST00000411792 ACYP2P14621 99 aa8.06□□□□□ -1.12
RFC4-203ENST00000411792 A6NN06 94 aa8.05□□□□□ -1.12
RFC4-203ENST00000411792 C20orf197Q8N268 126 aa8.05□□□□□ -1.12
RFC4-203ENST00000411792 SNURFQ9Y675 71 aa8.02□□□□□ -1.13
RFC4-203ENST00000411792 SPTSSBQ8NFR3 76 aa7.99□□□□□ -1.13
RFC4-203ENST00000411792 SERP2Q8N6R1 65 aa7.98□□□□□ -1.13
RFC4-203ENST00000411792 CHKB-CPT1BH3BT56 60 aa7.97□□□□□ -1.13
RFC4-203ENST00000411792 R4GN34 69 aa7.96□□□□□ -1.14
RFC4-203ENST00000411792 KRTAP6-3Q3LI67 103 aa7.95□□□□□ -1.14
RFC4-203ENST00000411792 P0C880 135 aa7.92□□□□□ -1.14
RFC4-203ENST00000411792 KRTAP10-5P60370 271 aa7.92□□□□□ -1.14
RFC4-203ENST00000411792 SPANXA2-OT1Q8N9U9 137 aa7.9□□□□□ -1.14
RFC4-203ENST00000411792 M0QZ58 72 aa7.89□□□□□ -1.15
RFC4-203ENST00000411792 PLAC4Q8WY50 150 aa7.85□□□□□ -1.15
RFC4-203ENST00000411792 KRTAP3-2Q9BYR7 98 aa7.84□□□□□ -1.15
RFC4-203ENST00000411792 LINC01554Q52M75 96 aa7.78□□□□□ -1.16
RFC4-203ENST00000411792 PRO2289Q9P1D8 64 aa7.78□□□□□ -1.16
RFC4-203ENST00000411792 COX7CP15954 63 aa7.77□□□□□ -1.17
RFC4-203ENST00000411792 COA5Q86WW8 74 aa7.67□□□□□ -1.18
RFC4-203ENST00000411792 MT1XP80297 61 aa7.64□□□□□ -1.19
RFC4-203ENST00000411792 NEBP20929 6669 aa7.61□□□□□ -1.19
RFC4-203ENST00000411792 ANAPC13Q9BS18 74 aa7.6□□□□□ -1.19
RFC4-203ENST00000411792 H7BZZ5 65 aa7.59□□□□□ -1.19
RFC4-203ENST00000411792 SEC61GP60059 68 aa7.57□□□□□ -1.2
RFC4-203ENST00000411792 CYSTM1Q9H1C7 97 aa7.55□□□□□ -1.2
RFC4-203ENST00000411792 SERP1Q9Y6X1 66 aa7.54□□□□□ -1.2
RFC4-203ENST00000411792 KRTAP5-9P26371 169 aa7.53□□□□□ -1.2
RFC4-203ENST00000411792 MUC12Q9UKN1 5478 aa7.52□□□□□ -1.21
RFC4-203ENST00000411792 KRTAP12-2P59991 146 aa7.45□□□□□ -1.22
RFC4-203ENST00000411792 KRTAP13-4Q3LI77 160 aa7.44□□□□□ -1.22
RFC4-203ENST00000411792 KRTAP20-1Q3LI63 56 aa7.43□□□□□ -1.22
RFC4-203ENST00000411792 KMT2DO14686 5537 aa7.4□□□□□ -1.22
RFC4-203ENST00000411792 SPRR2FQ96RM1 72 aa7.4□□□□□ -1.22
RFC4-203ENST00000411792 CCDC179H3BU77 68 aa7.39□□□□□ -1.23
RFC4-203ENST00000411792 KRTAP8-1Q8IUC2 63 aa7.39□□□□□ -1.23
RFC4-203ENST00000411792 CAMK2N1Q7Z7J9 78 aa7.37□□□□□ -1.23
RFC4-203ENST00000411792 A0A1B0GU33 70 aa7.35□□□□□ -1.23
RFC4-203ENST00000411792 ATP5EP56381 51 aaPredicted RBP7.34□□□□□ -1.23
RFC4-203ENST00000411792 MDN1Q9NU22 5596 aa7.32□□□□□ -1.24
RFC4-203ENST00000411792 A0A0D9SG42 100 aa7.32□□□□□ -1.24
RFC4-203ENST00000411792 A0A1B0GU69 56 aa7.32□□□□□ -1.24
RFC4-203ENST00000411792 KRTAP10-7P60409 375 aaPredicted RBP7.3□□□□□ -1.24
RFC4-203ENST00000411792 SPATA8Q6RVD6 105 aa7.3□□□□□ -1.24
RFC4-203ENST00000411792 SPRR2EP22531 72 aa7.29□□□□□ -1.24
RFC4-203ENST00000411792 SPRR2BP35325 72 aa7.29□□□□□ -1.24
RFC4-203ENST00000411792 SPRR2AP35326 72 aa7.29□□□□□ -1.24
RFC4-203ENST00000411792 KRTAP10-12P60413 245 aa7.27□□□□□ -1.25
RFC4-203ENST00000411792 KRTAP4-8A0A0G2JLE6 195 aa7.26□□□□□ -1.25
RFC4-203ENST00000411792 KRTAP4-8Q9BYQ9 185 aa7.26□□□□□ -1.25
RFC4-203ENST00000411792 PCP4P48539 62 aa7.25□□□□□ -1.25
RFC4-203ENST00000411792 SPINT4Q6UDR6 99 aa7.22□□□□□ -1.25
RFC4-203ENST00000411792 KRTAP2-3P0C7H8 128 aa7.19□□□□□ -1.26
RFC4-203ENST00000411792 KRTAP2-4Q9BYR9 128 aa7.19□□□□□ -1.26
RFC4-203ENST00000411792 SMIM26A0A096LP01 95 aa7.18□□□□□ -1.26
RFC4-203ENST00000411792 PRR15LQ9BU68 103 aa7.18□□□□□ -1.26
RFC4-203ENST00000411792 TMEM258P61165 79 aa7.17□□□□□ -1.26
RFC4-203ENST00000411792 LCE1AQ5T7P2 110 aa7.13□□□□□ -1.27
RFC4-203ENST00000411792 KRTAP12-1P59990 96 aa7.12□□□□□ -1.27
RFC4-203ENST00000411792 A8MU10 97 aa7.05□□□□□ -1.28
RFC4-203ENST00000411792 SPRR2DP22532 72 aa7.05□□□□□ -1.28
RFC4-203ENST00000411792 LINC01558Q9Y6Z2 57 aa7.05□□□□□ -1.28
RFC4-203ENST00000411792 KRTAP2-2Q9BYT5 123 aa6.95□□□□□ -1.3
RFC4-203ENST00000411792 KRTAP2-1Q9BYU5 128 aa6.95□□□□□ -1.3
RFC4-203ENST00000411792 UQCR11O14957 56 aa6.9□□□□□ -1.3
RFC4-203ENST00000411792 LCE3BQ5TA77 95 aa6.84□□□□□ -1.31
RFC4-203ENST00000411792 TNP1P09430 55 aa6.82□□□□□ -1.32
RFC4-203ENST00000411792 KRTAP19-7Q3SYF9 63 aa6.81□□□□□ -1.32
RFC4-203ENST00000411792 V9GYY9 64 aa6.8□□□□□ -1.32
RFC4-203ENST00000411792 MT1EP04732 61 aa6.78□□□□□ -1.32
RFC4-203ENST00000411792 RPS28P62857 69 aaKnown RBP6.78□□□□□ -1.32
RFC4-203ENST00000411792 C10orf95Q9H7T3 257 aa6.77□□□□□ -1.33
RFC4-203ENST00000411792 MIR22HGQ0VDD5 57 aa6.76□□□□□ -1.33
RFC4-203ENST00000411792 KRTAP19-5Q3LI72 72 aa6.72□□□□□ -1.33
RFC4-203ENST00000411792 KRTAP19-3Q7Z4W3 81 aa6.71□□□□□ -1.34
RFC4-203ENST00000411792 PSPHP1O15172 72 aa6.7□□□□□ -1.34
RFC4-203ENST00000411792 Q1T7F1 81 aa6.69□□□□□ -1.34
RFC4-203ENST00000411792 K7ERS5 55 aa6.68□□□□□ -1.34
RFC4-203ENST00000411792 LCE5AQ5TCM9 118 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 156.7 ms