RNA–Protein interactions for RNA: ENST00000409946.5

LRPPRC-203, Transcript of leucine rich pentatricopeptide repeat containing, humanhuman

TSL 1 (best) BASIC

Gene LRPPRC, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPPRC-203ENST00000409946 A0A1B0GU69 56 aa9.1□□□□□ -0.95
LRPPRC-203ENST00000409946 KRTAP3-1Q9BYR8 98 aa9.08□□□□□ -0.96
LRPPRC-203ENST00000409946 PMAIP1Q13794 54 aa9.04□□□□□ -0.96
LRPPRC-203ENST00000409946 HERC1Q15751 4861 aa9.03□□□□□ -0.96
LRPPRC-203ENST00000409946 COX6B2Q6YFQ2 88 aa9.02□□□□□ -0.97
LRPPRC-203ENST00000409946 SPTSSBQ8NFR3 76 aa9.02□□□□□ -0.97
LRPPRC-203ENST00000409946 SEC61BP60468 96 aaKnown RBP8.98□□□□□ -0.97
LRPPRC-203ENST00000409946 UQCR11O14957 56 aa8.94□□□□□ -0.98
LRPPRC-203ENST00000409946 SPATA8Q6RVD6 105 aa8.94□□□□□ -0.98
LRPPRC-203ENST00000409946 HMCN2Q8NDA2 5059 aa8.93□□□□□ -0.98
LRPPRC-203ENST00000409946 A6NN06 94 aa8.92□□□□□ -0.98
LRPPRC-203ENST00000409946 KRTAP4-1Q9BYQ7 146 aa8.92□□□□□ -0.98
LRPPRC-203ENST00000409946 SEC61GP60059 68 aa8.9□□□□□ -0.98
LRPPRC-203ENST00000409946 MIR22HGQ0VDD5 57 aa8.87□□□□□ -0.99
LRPPRC-203ENST00000409946 MUC17Q685J3 4493 aa8.86□□□□□ -0.99
LRPPRC-203ENST00000409946 KTN1-AS1Q86SY8 53 aa8.82□□□□□ -1
LRPPRC-203ENST00000409946 RBM12B-AS1Q9P1G2 102 aa8.82□□□□□ -1
LRPPRC-203ENST00000409946 H1FX-AS1Q4G0G2 97 aa8.77□□□□□ -1.01
LRPPRC-203ENST00000409946 S4R3F8 94 aa8.75□□□□□ -1.01
LRPPRC-203ENST00000409946 KRTAP3-3Q9BYR6 98 aa8.75□□□□□ -1.01
LRPPRC-203ENST00000409946 A0A1B0GU33 70 aa8.67□□□□□ -1.02
LRPPRC-203ENST00000409946 KRTAP19-2Q3LHN2 52 aa8.65□□□□□ -1.02
LRPPRC-203ENST00000409946 MUC2Q02817 5179 aa8.63□□□□□ -1.03
LRPPRC-203ENST00000409946 H0YAA0 97 aa8.62□□□□□ -1.03
LRPPRC-203ENST00000409946 UBR4Q5T4S7 5183 aa8.54□□□□□ -1.04
LRPPRC-203ENST00000409946 CSAG1Q6PB30 78 aa8.5□□□□□ -1.05
LRPPRC-203ENST00000409946 RNF213Q63HN8 5207 aa8.49□□□□□ -1.05
LRPPRC-203ENST00000409946 KRTAP10-6P60371 365 aaPredicted RBP8.48□□□□□ -1.05
LRPPRC-203ENST00000409946 KRTAP3-2Q9BYR7 98 aa8.45□□□□□ -1.06
LRPPRC-203ENST00000409946 LCE2CQ5TA81 110 aa8.41□□□□□ -1.06
LRPPRC-203ENST00000409946 ADM2Q7Z4H4 148 aa8.4□□□□□ -1.06
LRPPRC-203ENST00000409946 P0C880 135 aa8.4□□□□□ -1.07
LRPPRC-203ENST00000409946 FLGP20930 4061 aaPredicted RBP8.39□□□□□ -1.07
LRPPRC-203ENST00000409946 PRAC1Q96KF2 57 aa8.38□□□□□ -1.07
LRPPRC-203ENST00000409946 K7ERS5 55 aa8.37□□□□□ -1.07
LRPPRC-203ENST00000409946 KRTAP13-4Q3LI77 160 aa8.3□□□□□ -1.08
LRPPRC-203ENST00000409946 FAT4Q6V0I7 4981 aa8.3□□□□□ -1.08
LRPPRC-203ENST00000409946 MT1HP80294 61 aa8.24□□□□□ -1.09
LRPPRC-203ENST00000409946 A0A0D9SG42 100 aa8.18□□□□□ -1.1
LRPPRC-203ENST00000409946 LORP23490 312 aaPredicted RBP8.17□□□□□ -1.1
LRPPRC-203ENST00000409946 M0QZ58 72 aa8.17□□□□□ -1.1
LRPPRC-203ENST00000409946 M0R2T5 61 aa8.16□□□□□ -1.1
LRPPRC-203ENST00000409946 LINC01554Q52M75 96 aa8.13□□□□□ -1.11
LRPPRC-203ENST00000409946 ROMO1P60602 79 aa8.12□□□□□ -1.11
LRPPRC-203ENST00000409946 KRTAP25-1Q3LHN0 102 aa8.09□□□□□ -1.11
LRPPRC-203ENST00000409946 R4GN34 69 aa8.06□□□□□ -1.12
LRPPRC-203ENST00000409946 KRTAP12-1P59990 96 aa8.03□□□□□ -1.12
LRPPRC-203ENST00000409946 KRTAP12-2P59991 146 aa8.03□□□□□ -1.12
LRPPRC-203ENST00000409946 SPINT4Q6UDR6 99 aa7.96□□□□□ -1.14
LRPPRC-203ENST00000409946 MT2AP02795 61 aa7.94□□□□□ -1.14
LRPPRC-203ENST00000409946 KRTAP9-8Q9BYQ0 159 aa7.94□□□□□ -1.14
LRPPRC-203ENST00000409946 MT1FP04733 61 aa7.91□□□□□ -1.14
LRPPRC-203ENST00000409946 CRIPTQ9P021 101 aa7.88□□□□□ -1.15
LRPPRC-203ENST00000409946 KRTAP10-10P60014 251 aa7.86□□□□□ -1.15
LRPPRC-203ENST00000409946 LCE2AQ5TA79 106 aaPredicted RBP7.82□□□□□ -1.16
LRPPRC-203ENST00000409946 KRTAP19-1Q8IUB9 90 aa7.78□□□□□ -1.16
LRPPRC-203ENST00000409946 SPRR2GQ9BYE4 73 aa7.76□□□□□ -1.17
LRPPRC-203ENST00000409946 C10orf95Q9H7T3 257 aa7.68□□□□□ -1.18
LRPPRC-203ENST00000409946 KRTAP9-3Q9BYQ3 159 aa7.64□□□□□ -1.19
LRPPRC-203ENST00000409946 CAMK2N1Q7Z7J9 78 aa7.57□□□□□ -1.2
LRPPRC-203ENST00000409946 KRTAP19-8Q3LI54 63 aa7.55□□□□□ -1.2
LRPPRC-203ENST00000409946 PLAC4Q8WY50 150 aa7.52□□□□□ -1.21
LRPPRC-203ENST00000409946 MT1BP07438 61 aa7.5□□□□□ -1.21
LRPPRC-203ENST00000409946 LCE2BO14633 110 aa7.45□□□□□ -1.22
LRPPRC-203ENST00000409946 PP632Q6XCG6 107 aa7.35□□□□□ -1.23
LRPPRC-203ENST00000409946 KRTAP15-1Q3LI76 137 aa7.31□□□□□ -1.24
LRPPRC-203ENST00000409946 LCE2DQ5TA82 110 aaPredicted RBP7.29□□□□□ -1.24
LRPPRC-203ENST00000409946 MT1XP80297 61 aa7.27□□□□□ -1.25
LRPPRC-203ENST00000409946 KRTAP10-5P60370 271 aa7.26□□□□□ -1.25
LRPPRC-203ENST00000409946 TNP1P09430 55 aa7.24□□□□□ -1.25
LRPPRC-203ENST00000409946 KRTAP23-1A1A580 65 aa7.22□□□□□ -1.25
LRPPRC-203ENST00000409946 USH2AO75445 5202 aa7.22□□□□□ -1.25
LRPPRC-203ENST00000409946 PRO2289Q9P1D8 64 aa7.08□□□□□ -1.28
LRPPRC-203ENST00000409946 KRTAP10-7P60409 375 aaPredicted RBP7.01□□□□□ -1.29
LRPPRC-203ENST00000409946 SSPOA2VEC9 5147 aa6.99□□□□□ -1.29
LRPPRC-203ENST00000409946 H3BS24 57 aa6.99□□□□□ -1.29
LRPPRC-203ENST00000409946 NDUFAF8A1L188 74 aa6.97□□□□□ -1.29
LRPPRC-203ENST00000409946 LCE3AQ5TA76 89 aa6.95□□□□□ -1.3
LRPPRC-203ENST00000409946 FSIP2Q5CZC0 6907 aa6.93□□□□□ -1.3
LRPPRC-203ENST00000409946 KRTAP10-12P60413 245 aa6.91□□□□□ -1.3
LRPPRC-203ENST00000409946 KRTAP19-6Q3LI70 58 aa6.9□□□□□ -1.3
LRPPRC-203ENST00000409946 KRTAP9-2Q9BYQ4 174 aa6.76□□□□□ -1.33
LRPPRC-203ENST00000409946 LUZP6Q538Z0 58 aa6.75□□□□□ -1.33
LRPPRC-203ENST00000409946 KRTAP4-8A0A0G2JLE6 195 aa6.74□□□□□ -1.33
LRPPRC-203ENST00000409946 SPRR5A0A1B0GTR4 108 aa6.74□□□□□ -1.33
LRPPRC-203ENST00000409946 KRTAP4-8Q9BYQ9 185 aa6.74□□□□□ -1.33
LRPPRC-203ENST00000409946 KRTAP8-1Q8IUC2 63 aa6.73□□□□□ -1.33
LRPPRC-203ENST00000409946 KMT2DO14686 5537 aa6.73□□□□□ -1.33
LRPPRC-203ENST00000409946 FCGBPQ9Y6R7 5405 aaPredicted RBP6.66□□□□□ -1.34
LRPPRC-203ENST00000409946 KRTAP9-6A0A140TA67 174 aa6.66□□□□□ -1.34
LRPPRC-203ENST00000409946 KRTAP12-3P60328 96 aa6.62□□□□□ -1.35
LRPPRC-203ENST00000409946 KRTAP19-5Q3LI72 72 aa6.6□□□□□ -1.35
LRPPRC-203ENST00000409946 CRCT1Q9UGL9 99 aa6.52□□□□□ -1.37
LRPPRC-203ENST00000409946 KRTAP19-7Q3SYF9 63 aa6.48□□□□□ -1.37
LRPPRC-203ENST00000409946 MACF1Q9UPN3 7388 aaKnown RBP6.35□□□□□ -1.39
LRPPRC-203ENST00000409946 MT1EP04732 61 aa6.35□□□□□ -1.39
LRPPRC-203ENST00000409946 A0A0A0MQY5 61 aa6.25□□□□□ -1.41
LRPPRC-203ENST00000409946 MT1LQ93083 61 aa6.24□□□□□ -1.41
LRPPRC-203ENST00000409946 LCE3CQ5T5A8 94 aa6.19□□□□□ -1.42
LRPPRC-203ENST00000409946 SPRR2FQ96RM1 72 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 272 ms