RNA–Protein interactions for RNA: ENST00000409784.7

RAB1A-203, Transcript of RAB1A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB1A, Length 2,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1A-203ENST00000409784 STAB2Q8WWQ8 2551 aa7.6□□□□□ -1.19
RAB1A-203ENST00000409784 HECTD4Q9Y4D8 3996 aa7.58□□□□□ -1.2
RAB1A-203ENST00000409784 NOTCH1P46531 2555 aa7.57□□□□□ -1.2
RAB1A-203ENST00000409784 M0QZ58 72 aa7.56□□□□□ -1.2
RAB1A-203ENST00000409784 DNAH6Q9C0G6 4158 aa7.55□□□□□ -1.2
RAB1A-203ENST00000409784 KRTAP17-1Q9BYP8 105 aa7.51□□□□□ -1.21
RAB1A-203ENST00000409784 KMT2AQ03164 3969 aa7.5□□□□□ -1.21
RAB1A-203ENST00000409784 C9orf92A6NGG3 77 aa7.49□□□□□ -1.21
RAB1A-203ENST00000409784 MGAM2Q2M2H8 2515 aa7.46□□□□□ -1.22
RAB1A-203ENST00000409784 DNAH2Q9P225 4427 aa7.4□□□□□ -1.22
RAB1A-203ENST00000409784 MYCBP2O75592 4640 aa7.39□□□□□ -1.23
RAB1A-203ENST00000409784 PLECQ15149 4684 aaKnown RBP7.29□□□□□ -1.24
RAB1A-203ENST00000409784 BIRC6Q9NR09 4857 aa7.22□□□□□ -1.25
RAB1A-203ENST00000409784 STARD9Q9P2P6 4700 aa7.21□□□□□ -1.26
RAB1A-203ENST00000409784 SACSQ9NZJ4 4579 aa7.21□□□□□ -1.26
RAB1A-203ENST00000409784 KRTAP10-2P60368 255 aa7.12□□□□□ -1.27
RAB1A-203ENST00000409784 Q5VSD8 79 aa7.1□□□□□ -1.27
RAB1A-203ENST00000409784 DNAH5Q8TE73 4624 aa7.1□□□□□ -1.27
RAB1A-203ENST00000409784 LRP1BQ9NZR2 4599 aa7.09□□□□□ -1.27
RAB1A-203ENST00000409784 KRTAP10-1P60331 282 aa7.09□□□□□ -1.27
RAB1A-203ENST00000409784 RYR3Q15413 4870 aa7.06□□□□□ -1.28
RAB1A-203ENST00000409784 PKHD1L1Q86WI1 4243 aa7.03□□□□□ -1.28
RAB1A-203ENST00000409784 APOBP04114 4563 aaKnown RBP7.02□□□□□ -1.29
RAB1A-203ENST00000409784 VPS13BQ7Z7G8 4022 aa7□□□□□ -1.29
RAB1A-203ENST00000409784 KMT2CQ8NEZ4 4911 aaKnown RBP6.98□□□□□ -1.29
RAB1A-203ENST00000409784 A0A1B0GVY2 172 aa6.93□□□□□ -1.3
RAB1A-203ENST00000409784 LRP1Q07954 4544 aaKnown RBP6.92□□□□□ -1.3
RAB1A-203ENST00000409784 PCLOQ9Y6V0 5065 aa6.87□□□□□ -1.31
RAB1A-203ENST00000409784 HYDINQ4G0P3 5121 aa6.86□□□□□ -1.31
RAB1A-203ENST00000409784 PKHD1P08F94 4074 aa6.86□□□□□ -1.31
RAB1A-203ENST00000409784 FAT2Q9NYQ8 4349 aa6.85□□□□□ -1.31
RAB1A-203ENST00000409784 EPPK1P58107 5090 aaKnown RBP6.84□□□□□ -1.31
RAB1A-203ENST00000409784 PKD1P98161 4303 aa6.79□□□□□ -1.32
RAB1A-203ENST00000409784 TNXBP22105 4242 aa6.77□□□□□ -1.33
RAB1A-203ENST00000409784 TNP1P09430 55 aa6.74□□□□□ -1.33
RAB1A-203ENST00000409784 HERC2O95714 4834 aa6.72□□□□□ -1.33
RAB1A-203ENST00000409784 FAT3Q8TDW7 4589 aa6.65□□□□□ -1.34
RAB1A-203ENST00000409784 RYR2Q92736 4967 aa6.64□□□□□ -1.35
RAB1A-203ENST00000409784 LORP23490 312 aaPredicted RBP6.63□□□□□ -1.35
RAB1A-203ENST00000409784 DYNC1H1Q14204 4646 aaKnown RBP6.63□□□□□ -1.35
RAB1A-203ENST00000409784 KRTAP10-4P60372 401 aaPredicted RBP6.61□□□□□ -1.35
RAB1A-203ENST00000409784 RYR1P21817 5038 aa6.6□□□□□ -1.35
RAB1A-203ENST00000409784 HSPG2P98160 4391 aa6.59□□□□□ -1.35
RAB1A-203ENST00000409784 KRTAP10-10P60014 251 aa6.58□□□□□ -1.36
RAB1A-203ENST00000409784 SMR3BP02814 79 aaPredicted RBP6.5□□□□□ -1.37
RAB1A-203ENST00000409784 FAT1Q14517 4588 aa6.48□□□□□ -1.37
RAB1A-203ENST00000409784 UBR4Q5T4S7 5183 aa6.4□□□□□ -1.39
RAB1A-203ENST00000409784 FLGP20930 4061 aaPredicted RBP6.33□□□□□ -1.4
RAB1A-203ENST00000409784 ABCA13Q86UQ4 5058 aa6.2□□□□□ -1.42
RAB1A-203ENST00000409784 KIAA1109Q2LD37 5005 aa6.18□□□□□ -1.42
RAB1A-203ENST00000409784 KRTAP9-6A0A140TA67 174 aa6.17□□□□□ -1.42
RAB1A-203ENST00000409784 LCE3AQ5TA76 89 aa6.17□□□□□ -1.42
RAB1A-203ENST00000409784 KRTAP10-12P60413 245 aa6.16□□□□□ -1.42
RAB1A-203ENST00000409784 LPAP08519 4548 aa6.14□□□□□ -1.43
RAB1A-203ENST00000409784 KRTAP8-1Q8IUC2 63 aa6.13□□□□□ -1.43
RAB1A-203ENST00000409784 KRTAP4-5Q9BYR2 181 aa6.05□□□□□ -1.44
RAB1A-203ENST00000409784 HERC1Q15751 4861 aa6.04□□□□□ -1.44
RAB1A-203ENST00000409784 MT1HL1P0DM35 61 aa6□□□□□ -1.45
RAB1A-203ENST00000409784 KRTAP9-2Q9BYQ4 174 aa6□□□□□ -1.45
RAB1A-203ENST00000409784 LRP2P98164 4655 aa5.93□□□□□ -1.46
RAB1A-203ENST00000409784 KRTAP2-2Q9BYT5 123 aa5.9□□□□□ -1.46
RAB1A-203ENST00000409784 MUC17Q685J3 4493 aa5.9□□□□□ -1.46
RAB1A-203ENST00000409784 KRTAP19-2Q3LHN2 52 aa5.88□□□□□ -1.47
RAB1A-203ENST00000409784 KRTAP2-3P0C7H8 128 aa5.88□□□□□ -1.47
RAB1A-203ENST00000409784 KRTAP2-4Q9BYR9 128 aa5.88□□□□□ -1.47
RAB1A-203ENST00000409784 KRTAP2-1Q9BYU5 128 aa5.88□□□□□ -1.47
RAB1A-203ENST00000409784 KRTAP12-3P60328 96 aa5.86□□□□□ -1.47
RAB1A-203ENST00000409784 KRTAP10-5P60370 271 aa5.85□□□□□ -1.47
RAB1A-203ENST00000409784 SPRR2GQ9BYE4 73 aa5.76□□□□□ -1.49
RAB1A-203ENST00000409784 KRTAP4-1Q9BYQ7 146 aa5.73□□□□□ -1.49
RAB1A-203ENST00000409784 HMCN2Q8NDA2 5059 aa5.64□□□□□ -1.51
RAB1A-203ENST00000409784 LCE3CQ5T5A8 94 aa5.6□□□□□ -1.51
RAB1A-203ENST00000409784 LCE2AQ5TA79 106 aaPredicted RBP5.6□□□□□ -1.51
RAB1A-203ENST00000409784 KRTAP19-1Q8IUB9 90 aa5.59□□□□□ -1.51
RAB1A-203ENST00000409784 M0R2T5 61 aa5.58□□□□□ -1.52
RAB1A-203ENST00000409784 KRTAP10-7P60409 375 aaPredicted RBP5.57□□□□□ -1.52
RAB1A-203ENST00000409784 MUC2Q02817 5179 aa5.56□□□□□ -1.52
RAB1A-203ENST00000409784 RNF213Q63HN8 5207 aa5.56□□□□□ -1.52
RAB1A-203ENST00000409784 KRTAP6-3Q3LI67 103 aa5.56□□□□□ -1.52
RAB1A-203ENST00000409784 FAT4Q6V0I7 4981 aa5.54□□□□□ -1.52
RAB1A-203ENST00000409784 CRCT1Q9UGL9 99 aa5.53□□□□□ -1.52
RAB1A-203ENST00000409784 LCE1AQ5T7P2 110 aa5.5□□□□□ -1.53
RAB1A-203ENST00000409784 KRTAP9-6A8MVA2 160 aa5.46□□□□□ -1.53
RAB1A-203ENST00000409784 LCE2CQ5TA81 110 aa5.44□□□□□ -1.54
RAB1A-203ENST00000409784 KRTAP9-7A8MTY7 169 aa5.43□□□□□ -1.54
RAB1A-203ENST00000409784 KRTAP12-4P60329 112 aa5.38□□□□□ -1.55
RAB1A-203ENST00000409784 MT1XP80297 61 aa5.37□□□□□ -1.55
RAB1A-203ENST00000409784 KRTAP19-8Q3LI54 63 aa5.35□□□□□ -1.55
RAB1A-203ENST00000409784 LCE2DQ5TA82 110 aaPredicted RBP5.35□□□□□ -1.55
RAB1A-203ENST00000409784 KRTAP19-5Q3LI72 72 aa5.27□□□□□ -1.57
RAB1A-203ENST00000409784 KRTAP19-4Q3LI73 84 aa5.22□□□□□ -1.57
RAB1A-203ENST00000409784 LCE1EQ5T753 118 aa5.22□□□□□ -1.57
RAB1A-203ENST00000409784 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.19□□□□□ -1.58
RAB1A-203ENST00000409784 MT1BP07438 61 aa5.16□□□□□ -1.58
RAB1A-203ENST00000409784 MT1FP04733 61 aa5.06□□□□□ -1.6
RAB1A-203ENST00000409784 MT2AP02795 61 aa5.04□□□□□ -1.6
RAB1A-203ENST00000409784 MT1HP80294 61 aa5.04□□□□□ -1.6
RAB1A-203ENST00000409784 LCE1DQ5T752 114 aa5.03□□□□□ -1.6
RAB1A-203ENST00000409784 FSIP2Q5CZC0 6907 aa5□□□□□ -1.61
RAB1A-203ENST00000409784 LCE5AQ5TCM9 118 aa4.96□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms