RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 KTN1-AS1Q86SY8 53 aa8.05□□□□□ -1.12
SHANK2-204ENST00000409530 Q5VV11 94 aa8.03□□□□□ -1.12
SHANK2-204ENST00000409530 COA5Q86WW8 74 aa8.02□□□□□ -1.13
SHANK2-204ENST00000409530 PRR15LQ9BU68 103 aa7.96□□□□□ -1.14
SHANK2-204ENST00000409530 CHKB-CPT1BH3BT56 60 aa7.95□□□□□ -1.14
SHANK2-204ENST00000409530 COX6B2Q6YFQ2 88 aa7.93□□□□□ -1.14
SHANK2-204ENST00000409530 KRTAP3-1Q9BYR8 98 aa7.92□□□□□ -1.14
SHANK2-204ENST00000409530 DMAC1Q96GE9 116 aa7.9□□□□□ -1.14
SHANK2-204ENST00000409530 H3BS24 57 aa7.9□□□□□ -1.15
SHANK2-204ENST00000409530 LINC01558Q9Y6Z2 57 aa7.89□□□□□ -1.15
SHANK2-204ENST00000409530 A8MU10 97 aa7.88□□□□□ -1.15
SHANK2-204ENST00000409530 A6NED7 52 aa7.84□□□□□ -1.15
SHANK2-204ENST00000409530 ACYP2P14621 99 aa7.84□□□□□ -1.16
SHANK2-204ENST00000409530 LCA10Q71F78 164 aa7.84□□□□□ -1.16
SHANK2-204ENST00000409530 A6NN06 94 aa7.81□□□□□ -1.16
SHANK2-204ENST00000409530 FAT4Q6V0I7 4981 aa7.8□□□□□ -1.16
SHANK2-204ENST00000409530 H1FX-AS1Q4G0G2 97 aa7.79□□□□□ -1.16
SHANK2-204ENST00000409530 CDC42SE1Q9NRR8 79 aa7.79□□□□□ -1.16
SHANK2-204ENST00000409530 KRTAP19-2Q3LHN2 52 aa7.76□□□□□ -1.17
SHANK2-204ENST00000409530 S4R3F8 94 aa7.76□□□□□ -1.17
SHANK2-204ENST00000409530 SPTSSBQ8NFR3 76 aa7.75□□□□□ -1.17
SHANK2-204ENST00000409530 LCE2CQ5TA81 110 aa7.67□□□□□ -1.18
SHANK2-204ENST00000409530 FLGP20930 4061 aaPredicted RBP7.65□□□□□ -1.18
SHANK2-204ENST00000409530 KRTAP3-3Q9BYR6 98 aa7.64□□□□□ -1.19
SHANK2-204ENST00000409530 A0A0A0MQY5 61 aa7.63□□□□□ -1.19
SHANK2-204ENST00000409530 M0R2T5 61 aa7.6□□□□□ -1.19
SHANK2-204ENST00000409530 A0A1B0GU69 56 aa7.57□□□□□ -1.2
SHANK2-204ENST00000409530 MT1HP80294 61 aa7.57□□□□□ -1.2
SHANK2-204ENST00000409530 LINC01554Q52M75 96 aa7.56□□□□□ -1.2
SHANK2-204ENST00000409530 CSAG1Q6PB30 78 aa7.55□□□□□ -1.2
SHANK2-204ENST00000409530 SPATA8Q6RVD6 105 aa7.5□□□□□ -1.21
SHANK2-204ENST00000409530 UQCR11O14957 56 aa7.46□□□□□ -1.21
SHANK2-204ENST00000409530 MIR22HGQ0VDD5 57 aa7.43□□□□□ -1.22
SHANK2-204ENST00000409530 ADM2Q7Z4H4 148 aa7.42□□□□□ -1.22
SHANK2-204ENST00000409530 PRAC1Q96KF2 57 aa7.38□□□□□ -1.23
SHANK2-204ENST00000409530 P0C880 135 aa7.36□□□□□ -1.23
SHANK2-204ENST00000409530 LCE2AQ5TA79 106 aaPredicted RBP7.32□□□□□ -1.24
SHANK2-204ENST00000409530 KRTAP3-2Q9BYR7 98 aa7.31□□□□□ -1.24
SHANK2-204ENST00000409530 KRTAP10-6P60371 365 aaPredicted RBP7.31□□□□□ -1.24
SHANK2-204ENST00000409530 H0YAA0 97 aa7.26□□□□□ -1.25
SHANK2-204ENST00000409530 LORP23490 312 aaPredicted RBP7.25□□□□□ -1.25
SHANK2-204ENST00000409530 MT2AP02795 61 aa7.24□□□□□ -1.25
SHANK2-204ENST00000409530 KRTAP9-8Q9BYQ0 159 aa7.23□□□□□ -1.25
SHANK2-204ENST00000409530 MT1FP04733 61 aa7.22□□□□□ -1.25
SHANK2-204ENST00000409530 KRTAP10-10P60014 251 aa7.22□□□□□ -1.25
SHANK2-204ENST00000409530 A0A1B0GU33 70 aa7.21□□□□□ -1.26
SHANK2-204ENST00000409530 M0QZ58 72 aa7.16□□□□□ -1.26
SHANK2-204ENST00000409530 KRTAP13-4Q3LI77 160 aa7.16□□□□□ -1.26
SHANK2-204ENST00000409530 R4GN34 69 aa7.16□□□□□ -1.26
SHANK2-204ENST00000409530 A0A0D9SG42 100 aa7.1□□□□□ -1.27
SHANK2-204ENST00000409530 ROMO1P60602 79 aa7.06□□□□□ -1.28
SHANK2-204ENST00000409530 CRIPTQ9P021 101 aa7□□□□□ -1.29
SHANK2-204ENST00000409530 KRTAP19-1Q8IUB9 90 aa6.98□□□□□ -1.29
SHANK2-204ENST00000409530 KRTAP9-3Q9BYQ3 159 aa6.97□□□□□ -1.29
SHANK2-204ENST00000409530 K7ERS5 55 aa6.95□□□□□ -1.3
SHANK2-204ENST00000409530 SPRR2GQ9BYE4 73 aa6.94□□□□□ -1.3
SHANK2-204ENST00000409530 KRTAP25-1Q3LHN0 102 aa6.92□□□□□ -1.3
SHANK2-204ENST00000409530 SPINT4Q6UDR6 99 aa6.91□□□□□ -1.3
SHANK2-204ENST00000409530 LCE2BO14633 110 aa6.85□□□□□ -1.31
SHANK2-204ENST00000409530 KRTAP12-2P59991 146 aa6.85□□□□□ -1.31
SHANK2-204ENST00000409530 USH2AO75445 5202 aa6.83□□□□□ -1.32
SHANK2-204ENST00000409530 KRTAP12-1P59990 96 aa6.83□□□□□ -1.32
SHANK2-204ENST00000409530 FSIP2Q5CZC0 6907 aa6.77□□□□□ -1.33
SHANK2-204ENST00000409530 MT1BP07438 61 aa6.76□□□□□ -1.33
SHANK2-204ENST00000409530 KRTAP19-8Q3LI54 63 aa6.76□□□□□ -1.33
SHANK2-204ENST00000409530 PLAC4Q8WY50 150 aa6.76□□□□□ -1.33
SHANK2-204ENST00000409530 CAMK2N1Q7Z7J9 78 aa6.72□□□□□ -1.33
SHANK2-204ENST00000409530 LCE2DQ5TA82 110 aaPredicted RBP6.64□□□□□ -1.35
SHANK2-204ENST00000409530 KRTAP9-2Q9BYQ4 174 aa6.61□□□□□ -1.35
SHANK2-204ENST00000409530 SSPOA2VEC9 5147 aa6.59□□□□□ -1.35
SHANK2-204ENST00000409530 NDUFAF8A1L188 74 aa6.55□□□□□ -1.36
SHANK2-204ENST00000409530 MT1XP80297 61 aa6.52□□□□□ -1.37
SHANK2-204ENST00000409530 KRTAP15-1Q3LI76 137 aa6.5□□□□□ -1.37
SHANK2-204ENST00000409530 KRTAP10-5P60370 271 aa6.49□□□□□ -1.37
SHANK2-204ENST00000409530 C10orf95Q9H7T3 257 aa6.49□□□□□ -1.37
SHANK2-204ENST00000409530 PRO2289Q9P1D8 64 aa6.43□□□□□ -1.38
SHANK2-204ENST00000409530 LUZP6Q538Z0 58 aa6.39□□□□□ -1.39
SHANK2-204ENST00000409530 KRTAP19-6Q3LI70 58 aa6.38□□□□□ -1.39
SHANK2-204ENST00000409530 CRCT1Q9UGL9 99 aa6.32□□□□□ -1.4
SHANK2-204ENST00000409530 FCGBPQ9Y6R7 5405 aaPredicted RBP6.32□□□□□ -1.4
SHANK2-204ENST00000409530 KRTAP23-1A1A580 65 aa6.31□□□□□ -1.4
SHANK2-204ENST00000409530 KRTAP10-7P60409 375 aaPredicted RBP6.3□□□□□ -1.4
SHANK2-204ENST00000409530 TNP1P09430 55 aa6.29□□□□□ -1.4
SHANK2-204ENST00000409530 KMT2DO14686 5537 aa6.26□□□□□ -1.41
SHANK2-204ENST00000409530 KRTAP10-12P60413 245 aa6.17□□□□□ -1.42
SHANK2-204ENST00000409530 KRTAP9-6A0A140TA67 174 aa6.13□□□□□ -1.43
SHANK2-204ENST00000409530 KRTAP4-8A0A0G2JLE6 195 aa6.12□□□□□ -1.43
SHANK2-204ENST00000409530 KRTAP4-8Q9BYQ9 185 aa6.12□□□□□ -1.43
SHANK2-204ENST00000409530 LCE3AQ5TA76 89 aa6.11□□□□□ -1.43
SHANK2-204ENST00000409530 MACF1Q9UPN3 7388 aaKnown RBP6.1□□□□□ -1.43
SHANK2-204ENST00000409530 PP632Q6XCG6 107 aa6.04□□□□□ -1.44
SHANK2-204ENST00000409530 SYNE2Q8WXH0 6885 aaKnown RBP5.97□□□□□ -1.45
SHANK2-204ENST00000409530 KRTAP8-1Q8IUC2 63 aa5.95□□□□□ -1.46
SHANK2-204ENST00000409530 KRTAP19-5Q3LI72 72 aa5.89□□□□□ -1.47
SHANK2-204ENST00000409530 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.86□□□□□ -1.47
SHANK2-204ENST00000409530 KRTAP12-3P60328 96 aa5.83□□□□□ -1.48
SHANK2-204ENST00000409530 MUC12Q9UKN1 5478 aa5.8□□□□□ -1.48
SHANK2-204ENST00000409530 KRTAP19-7Q3SYF9 63 aa5.8□□□□□ -1.48
SHANK2-204ENST00000409530 SPRR2FQ96RM1 72 aa5.8□□□□□ -1.48
SHANK2-204ENST00000409530 MT1EP04732 61 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms