RNA–Protein interactions for RNA: ENST00000409475.5

PGAP1-204, Transcript of post-GPI attachment to proteins 1, humanhuman

TSL 2 BASIC

Gene PGAP1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP1-204ENST00000409475 SERP1Q9Y6X1 66 aa9.62□□□□□ -0.87
PGAP1-204ENST00000409475 FLGP20930 4061 aaPredicted RBP9.61□□□□□ -0.87
PGAP1-204ENST00000409475 KRTAP3-3Q9BYR6 98 aa9.58□□□□□ -0.88
PGAP1-204ENST00000409475 FAT4Q6V0I7 4981 aa9.56□□□□□ -0.88
PGAP1-204ENST00000409475 MT1HP80294 61 aa9.55□□□□□ -0.88
PGAP1-204ENST00000409475 SPTSSBQ8NFR3 76 aa9.55□□□□□ -0.88
PGAP1-204ENST00000409475 RPS28P62857 69 aaKnown RBP9.51□□□□□ -0.89
PGAP1-204ENST00000409475 CSAG1Q6PB30 78 aa9.5□□□□□ -0.89
PGAP1-204ENST00000409475 M0R2T5 61 aa9.41□□□□□ -0.9
PGAP1-204ENST00000409475 LCE2AQ5TA79 106 aaPredicted RBP9.38□□□□□ -0.91
PGAP1-204ENST00000409475 SMIM26A0A096LP01 95 aa9.33□□□□□ -0.92
PGAP1-204ENST00000409475 H0YAA0 97 aa9.32□□□□□ -0.92
PGAP1-204ENST00000409475 LINC01558Q9Y6Z2 57 aa9.25□□□□□ -0.93
PGAP1-204ENST00000409475 KRTAP10-6P60371 365 aaPredicted RBP9.25□□□□□ -0.93
PGAP1-204ENST00000409475 V9GYY9 64 aa9.23□□□□□ -0.93
PGAP1-204ENST00000409475 Q1T7F1 81 aa9.22□□□□□ -0.93
PGAP1-204ENST00000409475 LORP23490 312 aaPredicted RBP9.21□□□□□ -0.94
PGAP1-204ENST00000409475 ADM2Q7Z4H4 148 aa9.2□□□□□ -0.94
PGAP1-204ENST00000409475 SEC61GP60059 68 aa9.19□□□□□ -0.94
PGAP1-204ENST00000409475 KRTAP3-2Q9BYR7 98 aa9.19□□□□□ -0.94
PGAP1-204ENST00000409475 KRTAP9-8Q9BYQ0 159 aa9.17□□□□□ -0.94
PGAP1-204ENST00000409475 A0A1B0GU69 56 aa9.16□□□□□ -0.94
PGAP1-204ENST00000409475 PRR15LQ9BU68 103 aa9.13□□□□□ -0.95
PGAP1-204ENST00000409475 MT2AP02795 61 aa9.12□□□□□ -0.95
PGAP1-204ENST00000409475 P0C880 135 aa9.1□□□□□ -0.95
PGAP1-204ENST00000409475 MT1FP04733 61 aa9.05□□□□□ -0.96
PGAP1-204ENST00000409475 KRTAP10-10P60014 251 aa9.02□□□□□ -0.97
PGAP1-204ENST00000409475 CRIPTQ9P021 101 aa9.01□□□□□ -0.97
PGAP1-204ENST00000409475 PSPHP1O15172 72 aa9□□□□□ -0.97
PGAP1-204ENST00000409475 A0A1B0GU33 70 aa8.96□□□□□ -0.97
PGAP1-204ENST00000409475 Q5VV11 94 aa8.96□□□□□ -0.98
PGAP1-204ENST00000409475 M0QZ58 72 aa8.91□□□□□ -0.98
PGAP1-204ENST00000409475 R4GN34 69 aa8.89□□□□□ -0.99
PGAP1-204ENST00000409475 KRTAP9-3Q9BYQ3 159 aa8.86□□□□□ -0.99
PGAP1-204ENST00000409475 UQCR11O14957 56 aa8.85□□□□□ -0.99
PGAP1-204ENST00000409475 SPRR2GQ9BYE4 73 aa8.85□□□□□ -0.99
PGAP1-204ENST00000409475 KRTAP13-4Q3LI77 160 aa8.83□□□□□ -1
PGAP1-204ENST00000409475 KRTAP19-1Q8IUB9 90 aa8.81□□□□□ -1
PGAP1-204ENST00000409475 SPATA8Q6RVD6 105 aa8.78□□□□□ -1
PGAP1-204ENST00000409475 A6NED7 52 aa8.75□□□□□ -1.01
PGAP1-204ENST00000409475 MIR22HGQ0VDD5 57 aa8.72□□□□□ -1.01
PGAP1-204ENST00000409475 KRTAP19-8Q3LI54 63 aa8.66□□□□□ -1.02
PGAP1-204ENST00000409475 LINC01554Q52M75 96 aa8.66□□□□□ -1.02
PGAP1-204ENST00000409475 LCE2DQ5TA82 110 aaPredicted RBP8.65□□□□□ -1.02
PGAP1-204ENST00000409475 A6NN06 94 aa8.63□□□□□ -1.03
PGAP1-204ENST00000409475 LCE2BO14633 110 aa8.63□□□□□ -1.03
PGAP1-204ENST00000409475 A8MU10 97 aa8.62□□□□□ -1.03
PGAP1-204ENST00000409475 A0A0D9SG42 100 aa8.62□□□□□ -1.03
PGAP1-204ENST00000409475 CDC42SE1Q9NRR8 79 aa8.59□□□□□ -1.03
PGAP1-204ENST00000409475 MT1BP07438 61 aa8.53□□□□□ -1.04
PGAP1-204ENST00000409475 KRTAP12-1P59990 96 aa8.51□□□□□ -1.05
PGAP1-204ENST00000409475 PLAC4Q8WY50 150 aa8.48□□□□□ -1.05
PGAP1-204ENST00000409475 KRTAP12-2P59991 146 aa8.45□□□□□ -1.06
PGAP1-204ENST00000409475 SPINT4Q6UDR6 99 aa8.45□□□□□ -1.06
PGAP1-204ENST00000409475 BRK1Q8WUW1 75 aa8.44□□□□□ -1.06
PGAP1-204ENST00000409475 K7ERS5 55 aa8.39□□□□□ -1.07
PGAP1-204ENST00000409475 KRTAP9-2Q9BYQ4 174 aa8.38□□□□□ -1.07
PGAP1-204ENST00000409475 USH2AO75445 5202 aa8.38□□□□□ -1.07
PGAP1-204ENST00000409475 CAMK2N1Q7Z7J9 78 aa8.29□□□□□ -1.08
PGAP1-204ENST00000409475 KRTAP19-6Q3LI70 58 aa8.21□□□□□ -1.09
PGAP1-204ENST00000409475 MT1XP80297 61 aa8.2□□□□□ -1.1
PGAP1-204ENST00000409475 KRTAP10-5P60370 271 aa8.18□□□□□ -1.1
PGAP1-204ENST00000409475 PRO2289Q9P1D8 64 aa8.17□□□□□ -1.1
PGAP1-204ENST00000409475 PRO0628Q9UI54 55 aa8.17□□□□□ -1.1
PGAP1-204ENST00000409475 SSPOA2VEC9 5147 aa8.14□□□□□ -1.11
PGAP1-204ENST00000409475 C10orf95Q9H7T3 257 aa8.06□□□□□ -1.12
PGAP1-204ENST00000409475 CRCT1Q9UGL9 99 aa8.05□□□□□ -1.12
PGAP1-204ENST00000409475 ROMO1P60602 79 aa8□□□□□ -1.13
PGAP1-204ENST00000409475 FSIP2Q5CZC0 6907 aa7.99□□□□□ -1.13
PGAP1-204ENST00000409475 PMAIP1Q13794 54 aa7.99□□□□□ -1.13
PGAP1-204ENST00000409475 TNP1P09430 55 aa7.88□□□□□ -1.15
PGAP1-204ENST00000409475 KRTAP25-1Q3LHN0 102 aa7.86□□□□□ -1.15
PGAP1-204ENST00000409475 FCGBPQ9Y6R7 5405 aaPredicted RBP7.84□□□□□ -1.15
PGAP1-204ENST00000409475 KRTAP9-6A0A140TA67 174 aa7.83□□□□□ -1.16
PGAP1-204ENST00000409475 KRTAP10-7P60409 375 aaPredicted RBP7.82□□□□□ -1.16
PGAP1-204ENST00000409475 KRTAP10-12P60413 245 aa7.81□□□□□ -1.16
PGAP1-204ENST00000409475 KRTAP23-1A1A580 65 aa7.63□□□□□ -1.19
PGAP1-204ENST00000409475 KTN1-AS1Q86SY8 53 aa7.61□□□□□ -1.19
PGAP1-204ENST00000409475 LCE3AQ5TA76 89 aa7.57□□□□□ -1.2
PGAP1-204ENST00000409475 KRTAP4-8A0A0G2JLE6 195 aa7.55□□□□□ -1.2
PGAP1-204ENST00000409475 KRTAP4-8Q9BYQ9 185 aa7.55□□□□□ -1.2
PGAP1-204ENST00000409475 PP632Q6XCG6 107 aa7.54□□□□□ -1.2
PGAP1-204ENST00000409475 PRAC1Q96KF2 57 aa7.48□□□□□ -1.21
PGAP1-204ENST00000409475 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.47□□□□□ -1.21
PGAP1-204ENST00000409475 KRTAP8-1Q8IUC2 63 aa7.46□□□□□ -1.22
PGAP1-204ENST00000409475 MACF1Q9UPN3 7388 aaKnown RBP7.44□□□□□ -1.22
PGAP1-204ENST00000409475 KMT2DO14686 5537 aa7.42□□□□□ -1.22
PGAP1-204ENST00000409475 KRTAP19-5Q3LI72 72 aa7.33□□□□□ -1.24
PGAP1-204ENST00000409475 KRTAP19-7Q3SYF9 63 aa7.31□□□□□ -1.24
PGAP1-204ENST00000409475 KRTAP12-3P60328 96 aa7.29□□□□□ -1.24
PGAP1-204ENST00000409475 KRTAP5-9P26371 169 aa7.28□□□□□ -1.24
PGAP1-204ENST00000409475 KRTAP6-3Q3LI67 103 aa7.27□□□□□ -1.25
PGAP1-204ENST00000409475 MT1EP04732 61 aa7.21□□□□□ -1.25
PGAP1-204ENST00000409475 SPRR2FQ96RM1 72 aa7.21□□□□□ -1.26
PGAP1-204ENST00000409475 SYNE2Q8WXH0 6885 aaKnown RBP7.19□□□□□ -1.26
PGAP1-204ENST00000409475 KRTAP9-7A8MTY7 169 aa7.12□□□□□ -1.27
PGAP1-204ENST00000409475 SVIPQ8NHG7 77 aa7.12□□□□□ -1.27
PGAP1-204ENST00000409475 KRTAP15-1Q3LI76 137 aa7.09□□□□□ -1.27
PGAP1-204ENST00000409475 MT1LQ93083 61 aa7.03□□□□□ -1.28
PGAP1-204ENST00000409475 KRTAP19-3Q7Z4W3 81 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms