RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 SSBP3-AS1Q7Z2R9 100 aa6.03□□□□□ -1.44
NIF3L1-204ENST00000409357 LRP1Q07954 4544 aaKnown RBP6.02□□□□□ -1.45
NIF3L1-204ENST00000409357 SPACA4Q8TDM5 124 aa6.01□□□□□ -1.45
NIF3L1-204ENST00000409357 PANO1I0J062 215 aa6□□□□□ -1.45
NIF3L1-204ENST00000409357 ANAPC11Q9NYG5 84 aa6□□□□□ -1.45
NIF3L1-204ENST00000409357 CIRBP-AS1Q8TBR5 109 aa5.99□□□□□ -1.45
NIF3L1-204ENST00000409357 KRTAP16-1A8MUX0 517 aa5.98□□□□□ -1.45
NIF3L1-204ENST00000409357 H0YAA0 97 aa5.98□□□□□ -1.45
NIF3L1-204ENST00000409357 KRTAP10-4P60372 401 aaPredicted RBP5.97□□□□□ -1.45
NIF3L1-204ENST00000409357 PKHD1L1Q86WI1 4243 aa5.96□□□□□ -1.46
NIF3L1-204ENST00000409357 P0C880 135 aa5.96□□□□□ -1.46
NIF3L1-204ENST00000409357 SPINK6Q6UWN8 80 aa5.96□□□□□ -1.46
NIF3L1-204ENST00000409357 FAT3Q8TDW7 4589 aa5.95□□□□□ -1.46
NIF3L1-204ENST00000409357 A0A1B0GU33 70 aa5.92□□□□□ -1.46
NIF3L1-204ENST00000409357 K7ERS5 55 aa5.92□□□□□ -1.46
NIF3L1-204ENST00000409357 PSORS1C2Q9UIG4 136 aa5.92□□□□□ -1.46
NIF3L1-204ENST00000409357 H1FX-AS1Q4G0G2 97 aa5.9□□□□□ -1.47
NIF3L1-204ENST00000409357 KRTAP3-1Q9BYR8 98 aa5.89□□□□□ -1.47
NIF3L1-204ENST00000409357 XP32Q5T750 250 aa5.84□□□□□ -1.47
NIF3L1-204ENST00000409357 TNXBP22105 4242 aa5.83□□□□□ -1.48
NIF3L1-204ENST00000409357 HMCN2Q8NDA2 5059 aa5.81□□□□□ -1.48
NIF3L1-204ENST00000409357 SPINK1P00995 79 aa5.79□□□□□ -1.48
NIF3L1-204ENST00000409357 TYMSOSQ8TAI1 123 aa5.79□□□□□ -1.48
NIF3L1-204ENST00000409357 KRTAP15-1Q3LI76 137 aa5.78□□□□□ -1.48
NIF3L1-204ENST00000409357 COX6B2Q6YFQ2 88 aa5.78□□□□□ -1.48
NIF3L1-204ENST00000409357 C20orf166-AS1Q96NR2 134 aa5.78□□□□□ -1.48
NIF3L1-204ENST00000409357 MT1HL1P0DM35 61 aa5.77□□□□□ -1.49
NIF3L1-204ENST00000409357 UBR4Q5T4S7 5183 aa5.73□□□□□ -1.49
NIF3L1-204ENST00000409357 KRTAP19-4Q3LI73 84 aa5.73□□□□□ -1.49
NIF3L1-204ENST00000409357 SPINT4Q6UDR6 99 aa5.72□□□□□ -1.49
NIF3L1-204ENST00000409357 RPL37P61927 97 aaKnown RBP5.71□□□□□ -1.5
NIF3L1-204ENST00000409357 KRTAP13-2Q52LG2 175 aa5.7□□□□□ -1.5
NIF3L1-204ENST00000409357 TPRXLQ17RH7 258 aa5.69□□□□□ -1.5
NIF3L1-204ENST00000409357 RPS29P62273 56 aaKnown RBP5.68□□□□□ -1.5
NIF3L1-204ENST00000409357 LRP2P98164 4655 aa5.68□□□□□ -1.5
NIF3L1-204ENST00000409357 NDUFAF8A1L188 74 aa5.66□□□□□ -1.5
NIF3L1-204ENST00000409357 CRIPTQ9P021 101 aa5.65□□□□□ -1.51
NIF3L1-204ENST00000409357 KRTAP10-8P60410 259 aa5.64□□□□□ -1.51
NIF3L1-204ENST00000409357 LOC100996750A0A140TA64 210 aa5.62□□□□□ -1.51
NIF3L1-204ENST00000409357 KRTAP4-6Q9BYQ5 205 aa5.62□□□□□ -1.51
NIF3L1-204ENST00000409357 LPAP08519 4548 aa5.6□□□□□ -1.51
NIF3L1-204ENST00000409357 KRTAP1-4P0C5Y4 121 aa5.59□□□□□ -1.51
NIF3L1-204ENST00000409357 SEC61BP60468 96 aaKnown RBP5.59□□□□□ -1.51
NIF3L1-204ENST00000409357 RNF213Q63HN8 5207 aa5.59□□□□□ -1.52
NIF3L1-204ENST00000409357 KRTAP10-6P60371 365 aaPredicted RBP5.54□□□□□ -1.52
NIF3L1-204ENST00000409357 KRTAP19-1Q8IUB9 90 aa5.51□□□□□ -1.53
NIF3L1-204ENST00000409357 MUC2Q02817 5179 aa5.46□□□□□ -1.54
NIF3L1-204ENST00000409357 KRTAP13-4Q3LI77 160 aa5.46□□□□□ -1.54
NIF3L1-204ENST00000409357 C10orf95Q9H7T3 257 aa5.45□□□□□ -1.54
NIF3L1-204ENST00000409357 S4R3F8 94 aa5.45□□□□□ -1.54
NIF3L1-204ENST00000409357 KRTAP9-6A0A140TA67 174 aa5.41□□□□□ -1.54
NIF3L1-204ENST00000409357 KRTAP9-7A8MTY7 169 aa5.41□□□□□ -1.54
NIF3L1-204ENST00000409357 LUZP6Q538Z0 58 aa5.41□□□□□ -1.54
NIF3L1-204ENST00000409357 LCE4AQ5TA78 99 aa5.41□□□□□ -1.54
NIF3L1-204ENST00000409357 KRTAP4-12Q9BQ66 201 aa5.39□□□□□ -1.55
NIF3L1-204ENST00000409357 A0A0D9SG42 100 aa5.37□□□□□ -1.55
NIF3L1-204ENST00000409357 KRTAP12-1P59990 96 aa5.34□□□□□ -1.55
NIF3L1-204ENST00000409357 KRTAP12-2P59991 146 aa5.34□□□□□ -1.56
NIF3L1-204ENST00000409357 KRTAP4-8Q9BYQ9 185 aa5.34□□□□□ -1.56
NIF3L1-204ENST00000409357 M0QZ58 72 aa5.3□□□□□ -1.56
NIF3L1-204ENST00000409357 C9orf92A6NGG3 77 aa5.28□□□□□ -1.56
NIF3L1-204ENST00000409357 MUC17Q685J3 4493 aa5.28□□□□□ -1.56
NIF3L1-204ENST00000409357 KRTAP9-2Q9BYQ4 174 aa5.26□□□□□ -1.57
NIF3L1-204ENST00000409357 PLAC4Q8WY50 150 aa5.25□□□□□ -1.57
NIF3L1-204ENST00000409357 KRTAP9-9Q9BYP9 154 aa5.24□□□□□ -1.57
NIF3L1-204ENST00000409357 KRTAP9-4Q9BYQ2 154 aa5.24□□□□□ -1.57
NIF3L1-204ENST00000409357 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.24□□□□□ -1.57
NIF3L1-204ENST00000409357 FAT4Q6V0I7 4981 aa5.23□□□□□ -1.57
NIF3L1-204ENST00000409357 KRTAP4-1Q9BYQ7 146 aa5.15□□□□□ -1.59
NIF3L1-204ENST00000409357 PP632Q6XCG6 107 aa5.14□□□□□ -1.59
NIF3L1-204ENST00000409357 KRTAP9-3Q9BYQ3 159 aa5.12□□□□□ -1.59
NIF3L1-204ENST00000409357 CAMK2N1Q7Z7J9 78 aa5.11□□□□□ -1.59
NIF3L1-204ENST00000409357 LCE3BQ5TA77 95 aa5.1□□□□□ -1.59
NIF3L1-204ENST00000409357 KRTAP19-2Q3LHN2 52 aa4.99□□□□□ -1.61
NIF3L1-204ENST00000409357 SPRR5A0A1B0GTR4 108 aa4.97□□□□□ -1.61
NIF3L1-204ENST00000409357 FLGP20930 4061 aaPredicted RBP4.93□□□□□ -1.62
NIF3L1-204ENST00000409357 MT1HP80294 61 aa4.9□□□□□ -1.62
NIF3L1-204ENST00000409357 PRO2289Q9P1D8 64 aa4.9□□□□□ -1.62
NIF3L1-204ENST00000409357 R4GN34 69 aa4.89□□□□□ -1.63
NIF3L1-204ENST00000409357 LCE5AQ5TCM9 118 aa4.87□□□□□ -1.63
NIF3L1-204ENST00000409357 FSIP2Q5CZC0 6907 aa4.85□□□□□ -1.63
NIF3L1-204ENST00000409357 INE1O15225 51 aa4.8□□□□□ -1.64
NIF3L1-204ENST00000409357 LCE1DQ5T752 114 aa4.79□□□□□ -1.64
NIF3L1-204ENST00000409357 M0R2T5 61 aa4.77□□□□□ -1.65
NIF3L1-204ENST00000409357 KRTAP4-8A0A0G2JLE6 195 aa4.76□□□□□ -1.65
NIF3L1-204ENST00000409357 TNP1P09430 55 aa4.67□□□□□ -1.66
NIF3L1-204ENST00000409357 CRCT1Q9UGL9 99 aa4.67□□□□□ -1.66
NIF3L1-204ENST00000409357 KRTAP9-8Q9BYQ0 159 aa4.64□□□□□ -1.67
NIF3L1-204ENST00000409357 USH2AO75445 5202 aa4.61□□□□□ -1.67
NIF3L1-204ENST00000409357 MT2AP02795 61 aa4.58□□□□□ -1.68
NIF3L1-204ENST00000409357 KRTAP4-9Q9BYQ8 210 aa4.57□□□□□ -1.68
NIF3L1-204ENST00000409357 SSPOA2VEC9 5147 aa4.56□□□□□ -1.68
NIF3L1-204ENST00000409357 MT1FP04733 61 aa4.56□□□□□ -1.68
NIF3L1-204ENST00000409357 KRTAP4-7Q9BYR0 210 aa4.54□□□□□ -1.68
NIF3L1-204ENST00000409357 KRTAP4-11Q9BYQ6 195 aa4.53□□□□□ -1.68
NIF3L1-204ENST00000409357 KRTAP10-10P60014 251 aa4.48□□□□□ -1.69
NIF3L1-204ENST00000409357 KRTAP5-3Q6L8H2 238 aa4.47□□□□□ -1.69
NIF3L1-204ENST00000409357 FCGBPQ9Y6R7 5405 aaPredicted RBP4.44□□□□□ -1.7
NIF3L1-204ENST00000409357 LCE1AQ5T7P2 110 aa4.44□□□□□ -1.7
NIF3L1-204ENST00000409357 KRTAP4-2Q9BYR5 136 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms