RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 ACYP2P14621 99 aa8.32□□□□□ -1.08
SSB-202ENST00000409333 S4R3F8 94 aa8.26□□□□□ -1.09
SSB-202ENST00000409333 LCA10Q71F78 164 aa8.25□□□□□ -1.09
SSB-202ENST00000409333 COA5Q86WW8 74 aa8.24□□□□□ -1.09
SSB-202ENST00000409333 MT1HP80294 61 aa8.21□□□□□ -1.1
SSB-202ENST00000409333 KRTAP3-3Q9BYR6 98 aa8.2□□□□□ -1.1
SSB-202ENST00000409333 KRTAP3-2Q9BYR7 98 aa8.2□□□□□ -1.1
SSB-202ENST00000409333 CHKB-CPT1BH3BT56 60 aa8.18□□□□□ -1.1
SSB-202ENST00000409333 SERP1Q9Y6X1 66 aa8.16□□□□□ -1.1
SSB-202ENST00000409333 M0R2T5 61 aa8.1□□□□□ -1.11
SSB-202ENST00000409333 CSAG1Q6PB30 78 aa8.08□□□□□ -1.12
SSB-202ENST00000409333 LCE2AQ5TA79 106 aaPredicted RBP8.06□□□□□ -1.12
SSB-202ENST00000409333 SPTSSBQ8NFR3 76 aa8.05□□□□□ -1.12
SSB-202ENST00000409333 SMIM26A0A096LP01 95 aa8.04□□□□□ -1.12
SSB-202ENST00000409333 KRTAP10-6P60371 365 aaPredicted RBP7.94□□□□□ -1.14
SSB-202ENST00000409333 PRO0628Q9UI54 55 aa7.94□□□□□ -1.14
SSB-202ENST00000409333 LORP23490 312 aaPredicted RBP7.9□□□□□ -1.14
SSB-202ENST00000409333 H0YAA0 97 aa7.87□□□□□ -1.15
SSB-202ENST00000409333 ADM2Q7Z4H4 148 aa7.87□□□□□ -1.15
SSB-202ENST00000409333 KRTAP9-8Q9BYQ0 159 aa7.87□□□□□ -1.15
SSB-202ENST00000409333 MT2AP02795 61 aa7.83□□□□□ -1.16
SSB-202ENST00000409333 LINC01558Q9Y6Z2 57 aa7.82□□□□□ -1.16
SSB-202ENST00000409333 P0C880 135 aa7.8□□□□□ -1.16
SSB-202ENST00000409333 A0A1B0GU69 56 aa7.79□□□□□ -1.16
SSB-202ENST00000409333 MT1FP04733 61 aa7.79□□□□□ -1.16
SSB-202ENST00000409333 Q1T7F1 81 aa7.79□□□□□ -1.16
SSB-202ENST00000409333 SEC61GP60059 68 aa7.78□□□□□ -1.16
SSB-202ENST00000409333 KRTAP10-10P60014 251 aa7.74□□□□□ -1.17
SSB-202ENST00000409333 V9GYY9 64 aa7.74□□□□□ -1.17
SSB-202ENST00000409333 PRR15LQ9BU68 103 aa7.74□□□□□ -1.17
SSB-202ENST00000409333 BRK1Q8WUW1 75 aa7.7□□□□□ -1.18
SSB-202ENST00000409333 PSPHP1O15172 72 aa7.69□□□□□ -1.18
SSB-202ENST00000409333 A0A1B0GU33 70 aa7.62□□□□□ -1.19
SSB-202ENST00000409333 Q5VV11 94 aa7.61□□□□□ -1.19
SSB-202ENST00000409333 CRIPTQ9P021 101 aa7.6□□□□□ -1.19
SSB-202ENST00000409333 R4GN34 69 aa7.6□□□□□ -1.19
SSB-202ENST00000409333 KRTAP9-3Q9BYQ3 159 aa7.59□□□□□ -1.19
SSB-202ENST00000409333 M0QZ58 72 aa7.59□□□□□ -1.2
SSB-202ENST00000409333 KRTAP13-4Q3LI77 160 aa7.59□□□□□ -1.2
SSB-202ENST00000409333 KRTAP19-1Q8IUB9 90 aa7.55□□□□□ -1.2
SSB-202ENST00000409333 SPATA8Q6RVD6 105 aa7.54□□□□□ -1.2
SSB-202ENST00000409333 SPRR2GQ9BYE4 73 aa7.54□□□□□ -1.2
SSB-202ENST00000409333 UQCR11O14957 56 aa7.49□□□□□ -1.21
SSB-202ENST00000409333 LINC01554Q52M75 96 aa7.46□□□□□ -1.21
SSB-202ENST00000409333 A6NED7 52 aa7.44□□□□□ -1.22
SSB-202ENST00000409333 LCE2BO14633 110 aa7.43□□□□□ -1.22
SSB-202ENST00000409333 PMAIP1Q13794 54 aa7.42□□□□□ -1.22
SSB-202ENST00000409333 A0A0D9SG42 100 aa7.41□□□□□ -1.22
SSB-202ENST00000409333 A8MU10 97 aa7.41□□□□□ -1.22
SSB-202ENST00000409333 MIR22HGQ0VDD5 57 aa7.4□□□□□ -1.23
SSB-202ENST00000409333 KRTAP19-8Q3LI54 63 aa7.37□□□□□ -1.23
SSB-202ENST00000409333 USH2AO75445 5202 aa7.34□□□□□ -1.23
SSB-202ENST00000409333 MT1BP07438 61 aa7.32□□□□□ -1.24
SSB-202ENST00000409333 CDC42SE1Q9NRR8 79 aa7.3□□□□□ -1.24
SSB-202ENST00000409333 A6NN06 94 aa7.28□□□□□ -1.24
SSB-202ENST00000409333 KRTAP12-1P59990 96 aa7.25□□□□□ -1.25
SSB-202ENST00000409333 KTN1-AS1Q86SY8 53 aa7.25□□□□□ -1.25
SSB-202ENST00000409333 KRTAP12-2P59991 146 aa7.24□□□□□ -1.25
SSB-202ENST00000409333 KRTAP9-2Q9BYQ4 174 aa7.24□□□□□ -1.25
SSB-202ENST00000409333 SPINT4Q6UDR6 99 aa7.23□□□□□ -1.25
SSB-202ENST00000409333 PLAC4Q8WY50 150 aa7.22□□□□□ -1.25
SSB-202ENST00000409333 FSIP2Q5CZC0 6907 aa7.21□□□□□ -1.25
SSB-202ENST00000409333 SSPOA2VEC9 5147 aa7.16□□□□□ -1.26
SSB-202ENST00000409333 CAMK2N1Q7Z7J9 78 aa7.08□□□□□ -1.28
SSB-202ENST00000409333 K7ERS5 55 aa7.08□□□□□ -1.28
SSB-202ENST00000409333 MT1XP80297 61 aa7.03□□□□□ -1.28
SSB-202ENST00000409333 KRTAP10-5P60370 271 aa7.01□□□□□ -1.29
SSB-202ENST00000409333 KRTAP19-6Q3LI70 58 aa7.01□□□□□ -1.29
SSB-202ENST00000409333 PRO2289Q9P1D8 64 aa6.94□□□□□ -1.3
SSB-202ENST00000409333 CRCT1Q9UGL9 99 aa6.94□□□□□ -1.3
SSB-202ENST00000409333 C10orf95Q9H7T3 257 aa6.89□□□□□ -1.31
SSB-202ENST00000409333 FCGBPQ9Y6R7 5405 aaPredicted RBP6.86□□□□□ -1.31
SSB-202ENST00000409333 ROMO1P60602 79 aa6.77□□□□□ -1.33
SSB-202ENST00000409333 KRTAP9-6A0A140TA67 174 aa6.75□□□□□ -1.33
SSB-202ENST00000409333 KRTAP10-7P60409 375 aaPredicted RBP6.74□□□□□ -1.33
SSB-202ENST00000409333 PRAC1Q96KF2 57 aa6.74□□□□□ -1.33
SSB-202ENST00000409333 LOC100996750A0A140TA64 210 aa6.71□□□□□ -1.34
SSB-202ENST00000409333 KRTAP4-6Q9BYQ5 205 aa6.71□□□□□ -1.34
SSB-202ENST00000409333 TNP1P09430 55 aa6.69□□□□□ -1.34
SSB-202ENST00000409333 KMT2DO14686 5537 aa6.66□□□□□ -1.34
SSB-202ENST00000409333 KRTAP10-12P60413 245 aa6.65□□□□□ -1.34
SSB-202ENST00000409333 KRTAP25-1Q3LHN0 102 aa6.63□□□□□ -1.35
SSB-202ENST00000409333 MACF1Q9UPN3 7388 aaKnown RBP6.6□□□□□ -1.35
SSB-202ENST00000409333 KRTAP4-8A0A0G2JLE6 195 aa6.54□□□□□ -1.36
SSB-202ENST00000409333 KRTAP4-8Q9BYQ9 185 aa6.54□□□□□ -1.36
SSB-202ENST00000409333 LCE3AQ5TA76 89 aa6.49□□□□□ -1.37
SSB-202ENST00000409333 SYNE2Q8WXH0 6885 aaKnown RBP6.46□□□□□ -1.38
SSB-202ENST00000409333 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.44□□□□□ -1.38
SSB-202ENST00000409333 KRTAP8-1Q8IUC2 63 aa6.4□□□□□ -1.38
SSB-202ENST00000409333 KRTAP23-1A1A580 65 aa6.38□□□□□ -1.39
SSB-202ENST00000409333 PP632Q6XCG6 107 aa6.34□□□□□ -1.4
SSB-202ENST00000409333 KRTAP19-5Q3LI72 72 aa6.29□□□□□ -1.4
SSB-202ENST00000409333 KRTAP19-7Q3SYF9 63 aa6.27□□□□□ -1.41
SSB-202ENST00000409333 SPRR2FQ96RM1 72 aa6.23□□□□□ -1.41
SSB-202ENST00000409333 KRTAP12-3P60328 96 aa6.22□□□□□ -1.41
SSB-202ENST00000409333 H3BS24 57 aa6.21□□□□□ -1.41
SSB-202ENST00000409333 KRTAP5-9P26371 169 aa6.21□□□□□ -1.41
SSB-202ENST00000409333 KRTAP6-3Q3LI67 103 aa6.2□□□□□ -1.42
SSB-202ENST00000409333 MUC12Q9UKN1 5478 aa6.18□□□□□ -1.42
SSB-202ENST00000409333 MT1EP04732 61 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms