RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 PCP4L1A6NKN8 68 aa7.07□□□□□ -1.28
CHMP3-203ENST00000409225 CRIPTQ9P021 101 aa7.07□□□□□ -1.28
CHMP3-203ENST00000409225 ATXN8Q156A1 80 aa7.03□□□□□ -1.28
CHMP3-203ENST00000409225 PRO2289Q9P1D8 64 aa7.03□□□□□ -1.28
CHMP3-203ENST00000409225 CASC2Q6XLA1 102 aa7.02□□□□□ -1.29
CHMP3-203ENST00000409225 CXCL6P80162 114 aa7.01□□□□□ -1.29
CHMP3-203ENST00000409225 MT1XP80297 61 aa7□□□□□ -1.29
CHMP3-203ENST00000409225 BPY2O14599 106 aa6.98□□□□□ -1.29
CHMP3-203ENST00000409225 Q8N9L7 120 aa6.98□□□□□ -1.29
CHMP3-203ENST00000409225 BATFQ16520 125 aa6.95□□□□□ -1.3
CHMP3-203ENST00000409225 M0R143 59 aa6.93□□□□□ -1.3
CHMP3-203ENST00000409225 NAA38Q9BRA0 125 aaKnown RBP6.92□□□□□ -1.3
CHMP3-203ENST00000409225 KRTAP12-2P59991 146 aa6.91□□□□□ -1.3
CHMP3-203ENST00000409225 LCE4AQ5TA78 99 aa6.91□□□□□ -1.3
CHMP3-203ENST00000409225 KRTAP4-8A0A0G2JLE6 195 aa6.9□□□□□ -1.3
CHMP3-203ENST00000409225 KRTAP9-9Q9BYP9 154 aa6.88□□□□□ -1.31
CHMP3-203ENST00000409225 KRTAP9-4Q9BYQ2 154 aa6.88□□□□□ -1.31
CHMP3-203ENST00000409225 A0A087WVE0 104 aa6.87□□□□□ -1.31
CHMP3-203ENST00000409225 A8MUN3 132 aa6.85□□□□□ -1.31
CHMP3-203ENST00000409225 PLAC4Q8WY50 150 aa6.85□□□□□ -1.31
CHMP3-203ENST00000409225 COL5A1-AS1Q5SY13 56 aa6.82□□□□□ -1.32
CHMP3-203ENST00000409225 TAX1BP3O14907 124 aa6.8□□□□□ -1.32
CHMP3-203ENST00000409225 KRTAP23-1A1A580 65 aa6.79□□□□□ -1.32
CHMP3-203ENST00000409225 H0YAA0 97 aa6.77□□□□□ -1.33
CHMP3-203ENST00000409225 ADM2Q7Z4H4 148 aa6.75□□□□□ -1.33
CHMP3-203ENST00000409225 DSTQ03001 7570 aaKnown RBP6.74□□□□□ -1.33
CHMP3-203ENST00000409225 A0A1W2PPM0 123 aa6.71□□□□□ -1.34
CHMP3-203ENST00000409225 NDUFC1O43677 76 aa6.71□□□□□ -1.34
CHMP3-203ENST00000409225 A0A1B0GV90 55 aa6.7□□□□□ -1.34
CHMP3-203ENST00000409225 KRTAP10-7P60409 375 aaPredicted RBP6.69□□□□□ -1.34
CHMP3-203ENST00000409225 KRTAP4-9Q9BYQ8 210 aa6.69□□□□□ -1.34
CHMP3-203ENST00000409225 TP53AIP1Q9HCN2 124 aa6.69□□□□□ -1.34
CHMP3-203ENST00000409225 CYP4F30PQ9H0H9 118 aa6.68□□□□□ -1.34
CHMP3-203ENST00000409225 H3BT86 120 aa6.67□□□□□ -1.34
CHMP3-203ENST00000409225 SPCS1Q9Y6A9 102 aa6.67□□□□□ -1.34
CHMP3-203ENST00000409225 K7EP34 96 aa6.65□□□□□ -1.34
CHMP3-203ENST00000409225 KRTAP10-12P60413 245 aa6.62□□□□□ -1.35
CHMP3-203ENST00000409225 LCE1DQ5T752 114 aa6.62□□□□□ -1.35
CHMP3-203ENST00000409225 GTF2H5Q6ZYL4 71 aa6.61□□□□□ -1.35
CHMP3-203ENST00000409225 R4GN34 69 aa6.61□□□□□ -1.35
CHMP3-203ENST00000409225 UBL5Q9BZL1 73 aa6.58□□□□□ -1.36
CHMP3-203ENST00000409225 M0QZ58 72 aa6.55□□□□□ -1.36
CHMP3-203ENST00000409225 LOC101927531A0A1B0GV80 90 aa6.54□□□□□ -1.36
CHMP3-203ENST00000409225 PRO0461Q9UI25 63 aa6.54□□□□□ -1.36
CHMP3-203ENST00000409225 P0C880 135 aa6.51□□□□□ -1.37
CHMP3-203ENST00000409225 LINC01554Q52M75 96 aa6.51□□□□□ -1.37
CHMP3-203ENST00000409225 TRAV22A0A0B4J277 110 aa6.5□□□□□ -1.37
CHMP3-203ENST00000409225 F8W1H4 67 aa6.5□□□□□ -1.37
CHMP3-203ENST00000409225 ACYP1P07311 99 aa6.48□□□□□ -1.37
CHMP3-203ENST00000409225 HMCN1Q96RW7 5635 aa6.48□□□□□ -1.37
CHMP3-203ENST00000409225 ETDBQ3ZM63 59 aa6.45□□□□□ -1.38
CHMP3-203ENST00000409225 C20orf197Q8N268 126 aa6.45□□□□□ -1.38
CHMP3-203ENST00000409225 AHNAK2Q8IVF2 5795 aa6.43□□□□□ -1.38
CHMP3-203ENST00000409225 LCE5AQ5TCM9 118 aa6.4□□□□□ -1.38
CHMP3-203ENST00000409225 KRTAP4-7Q9BYR0 210 aa6.4□□□□□ -1.38
CHMP3-203ENST00000409225 SVIPQ8NHG7 77 aa6.37□□□□□ -1.39
CHMP3-203ENST00000409225 H0Y9P7 68 aa6.33□□□□□ -1.4
CHMP3-203ENST00000409225 MT4P47944 62 aa6.32□□□□□ -1.4
CHMP3-203ENST00000409225 ATOX1O00244 68 aa6.3□□□□□ -1.4
CHMP3-203ENST00000409225 KRTAP19-3Q7Z4W3 81 aa6.3□□□□□ -1.4
CHMP3-203ENST00000409225 J3QR89 54 aa6.27□□□□□ -1.41
CHMP3-203ENST00000409225 UQCRQO14949 82 aa6.27□□□□□ -1.41
CHMP3-203ENST00000409225 KRTAP19-7Q3SYF9 63 aa6.26□□□□□ -1.41
CHMP3-203ENST00000409225 KRTAP5-10Q6L8G5 202 aa6.26□□□□□ -1.41
CHMP3-203ENST00000409225 K7ERU9 68 aa6.24□□□□□ -1.41
CHMP3-203ENST00000409225 MT1EP04732 61 aa6.24□□□□□ -1.41
CHMP3-203ENST00000409225 MT-ATP8P03928 68 aa6.23□□□□□ -1.41
CHMP3-203ENST00000409225 KRTAP15-1Q3LI76 137 aa6.23□□□□□ -1.41
CHMP3-203ENST00000409225 FAM240AA0A1B0GVK7 77 aa6.22□□□□□ -1.41
CHMP3-203ENST00000409225 CYSTM1Q9H1C7 97 aa6.22□□□□□ -1.41
CHMP3-203ENST00000409225 KRTAP4-11Q9BYQ6 195 aa6.2□□□□□ -1.42
CHMP3-203ENST00000409225 LINC00208Q96KT6 92 aa6.18□□□□□ -1.42
CHMP3-203ENST00000409225 KRTAP4-2Q9BYR5 136 aa6.12□□□□□ -1.43
CHMP3-203ENST00000409225 LINC00643Q86TS7 51 aa6.11□□□□□ -1.43
CHMP3-203ENST00000409225 HIST1H4AP62805 103 aaKnown RBP6.1□□□□□ -1.43
CHMP3-203ENST00000409225 KRTAP5-7Q6L8G8 165 aa6.09□□□□□ -1.43
CHMP3-203ENST00000409225 MT1GP13640 62 aa6.07□□□□□ -1.44
CHMP3-203ENST00000409225 ATP5EP2Q5VTU8 51 aa6.06□□□□□ -1.44
CHMP3-203ENST00000409225 DMAC1Q96GE9 116 aa6.05□□□□□ -1.44
CHMP3-203ENST00000409225 MP68P56378 58 aa6.03□□□□□ -1.44
CHMP3-203ENST00000409225 PP632Q6XCG6 107 aa6.03□□□□□ -1.44
CHMP3-203ENST00000409225 KRTAP5-4Q6L8H1 288 aa6.02□□□□□ -1.45
CHMP3-203ENST00000409225 CAMK2N1Q7Z7J9 78 aa6□□□□□ -1.45
CHMP3-203ENST00000409225 KRTAP5-3Q6L8H2 238 aa5.99□□□□□ -1.45
CHMP3-203ENST00000409225 MT1MQ8N339 61 aa5.99□□□□□ -1.45
CHMP3-203ENST00000409225 KRTAP19-5Q3LI72 72 aa5.97□□□□□ -1.45
CHMP3-203ENST00000409225 SPRR5A0A1B0GTR4 108 aa5.93□□□□□ -1.46
CHMP3-203ENST00000409225 OCR1Q9BZK8 76 aa5.92□□□□□ -1.46
CHMP3-203ENST00000409225 KRTAP4-3Q9BYR4 195 aa5.91□□□□□ -1.46
CHMP3-203ENST00000409225 PCP4P48539 62 aa5.9□□□□□ -1.46
CHMP3-203ENST00000409225 TRAV7A0A075B6U4 112 aa5.89□□□□□ -1.47
CHMP3-203ENST00000409225 A0A0D9SG42 100 aa5.88□□□□□ -1.47
CHMP3-203ENST00000409225 MT1LQ93083 61 aa5.87□□□□□ -1.47
CHMP3-203ENST00000409225 SCGB1A1P11684 91 aa5.86□□□□□ -1.47
CHMP3-203ENST00000409225 KRTAP13-4Q3LI77 160 aa5.84□□□□□ -1.47
CHMP3-203ENST00000409225 SPTSSBQ8NFR3 76 aa5.84□□□□□ -1.47
CHMP3-203ENST00000409225 H3BPC8 53 aa5.83□□□□□ -1.48
CHMP3-203ENST00000409225 ACYP2P14621 99 aa5.79□□□□□ -1.48
CHMP3-203ENST00000409225 KRTAP20-2Q3LI61 65 aa5.75□□□□□ -1.49
CHMP3-203ENST00000409225 SMIM20Q8N5G0 67 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms