RNA–Protein interactions for RNA: ENST00000409024.3

POLR1A-202, Transcript of RNA polymerase I subunit A, humanhuman

TSL 3

Gene POLR1A, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-202ENST00000409024 CHKB-CPT1BH3BT56 60 aa5.03□□□□□ -1.6
POLR1A-202ENST00000409024 MPLKIPQ8TAP9 179 aa5.03□□□□□ -1.6
POLR1A-202ENST00000409024 V9GYY9 64 aa5.03□□□□□ -1.6
POLR1A-202ENST00000409024 RBM12B-AS1Q9P1G2 102 aa5.02□□□□□ -1.61
POLR1A-202ENST00000409024 SPTSSBQ8NFR3 76 aa5.01□□□□□ -1.61
POLR1A-202ENST00000409024 KRTAP3-1Q9BYR8 98 aa5.01□□□□□ -1.61
POLR1A-202ENST00000409024 Q1T7F1 81 aa4.99□□□□□ -1.61
POLR1A-202ENST00000409024 KRTAP9-7A8MTY7 169 aa4.97□□□□□ -1.61
POLR1A-202ENST00000409024 MUC17Q685J3 4493 aa4.97□□□□□ -1.61
POLR1A-202ENST00000409024 H1FX-AS1Q4G0G2 97 aa4.96□□□□□ -1.62
POLR1A-202ENST00000409024 LINC01558Q9Y6Z2 57 aa4.93□□□□□ -1.62
POLR1A-202ENST00000409024 KRTAP4-1Q9BYQ7 146 aa4.9□□□□□ -1.63
POLR1A-202ENST00000409024 S4R3F8 94 aa4.9□□□□□ -1.63
POLR1A-202ENST00000409024 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.87□□□□□ -1.63
POLR1A-202ENST00000409024 PRR15LQ9BU68 103 aa4.87□□□□□ -1.63
POLR1A-202ENST00000409024 SEC61GP60059 68 aa4.85□□□□□ -1.63
POLR1A-202ENST00000409024 LCA10Q71F78 164 aa4.85□□□□□ -1.63
POLR1A-202ENST00000409024 KRTAP3-3Q9BYR6 98 aa4.84□□□□□ -1.63
POLR1A-202ENST00000409024 A0A1B0GU69 56 aa4.83□□□□□ -1.64
POLR1A-202ENST00000409024 KRTAP19-2Q3LHN2 52 aa4.82□□□□□ -1.64
POLR1A-202ENST00000409024 CSAG1Q6PB30 78 aa4.82□□□□□ -1.64
POLR1A-202ENST00000409024 PSPHP1O15172 72 aa4.8□□□□□ -1.64
POLR1A-202ENST00000409024 Q5VV11 94 aa4.79□□□□□ -1.64
POLR1A-202ENST00000409024 H0YAA0 97 aa4.77□□□□□ -1.65
POLR1A-202ENST00000409024 UQCR11O14957 56 aa4.72□□□□□ -1.65
POLR1A-202ENST00000409024 LCE2CQ5TA81 110 aa4.71□□□□□ -1.66
POLR1A-202ENST00000409024 A6NED7 52 aa4.7□□□□□ -1.66
POLR1A-202ENST00000409024 LORP23490 312 aaPredicted RBP4.7□□□□□ -1.66
POLR1A-202ENST00000409024 SSPOA2VEC9 5147 aa4.7□□□□□ -1.66
POLR1A-202ENST00000409024 MT1HP80294 61 aa4.69□□□□□ -1.66
POLR1A-202ENST00000409024 A0A1B0GU33 70 aa4.68□□□□□ -1.66
POLR1A-202ENST00000409024 KRTAP10-6P60371 365 aaPredicted RBP4.68□□□□□ -1.66
POLR1A-202ENST00000409024 KRTAP3-2Q9BYR7 98 aa4.68□□□□□ -1.66
POLR1A-202ENST00000409024 FLGP20930 4061 aaPredicted RBP4.68□□□□□ -1.66
POLR1A-202ENST00000409024 ADM2Q7Z4H4 148 aa4.66□□□□□ -1.66
POLR1A-202ENST00000409024 CDC42SE1Q9NRR8 79 aa4.66□□□□□ -1.66
POLR1A-202ENST00000409024 SPATA8Q6RVD6 105 aa4.65□□□□□ -1.67
POLR1A-202ENST00000409024 USH2AO75445 5202 aa4.65□□□□□ -1.67
POLR1A-202ENST00000409024 MIR22HGQ0VDD5 57 aa4.64□□□□□ -1.67
POLR1A-202ENST00000409024 FCGBPQ9Y6R7 5405 aaPredicted RBP4.64□□□□□ -1.67
POLR1A-202ENST00000409024 BRK1Q8WUW1 75 aa4.63□□□□□ -1.67
POLR1A-202ENST00000409024 M0QZ58 72 aa4.61□□□□□ -1.67
POLR1A-202ENST00000409024 M0R2T5 61 aa4.61□□□□□ -1.67
POLR1A-202ENST00000409024 P0C880 135 aa4.6□□□□□ -1.67
POLR1A-202ENST00000409024 PRO0628Q9UI54 55 aa4.6□□□□□ -1.67
POLR1A-202ENST00000409024 CRIPTQ9P021 101 aa4.58□□□□□ -1.68
POLR1A-202ENST00000409024 MACF1Q9UPN3 7388 aaKnown RBP4.57□□□□□ -1.68
POLR1A-202ENST00000409024 SYNE2Q8WXH0 6885 aaKnown RBP4.57□□□□□ -1.68
POLR1A-202ENST00000409024 R4GN34 69 aa4.52□□□□□ -1.69
POLR1A-202ENST00000409024 K7ERS5 55 aa4.49□□□□□ -1.69
POLR1A-202ENST00000409024 KRTAP13-4Q3LI77 160 aa4.49□□□□□ -1.69
POLR1A-202ENST00000409024 A8MU10 97 aa4.48□□□□□ -1.69
POLR1A-202ENST00000409024 KRTAP19-1Q8IUB9 90 aa4.47□□□□□ -1.69
POLR1A-202ENST00000409024 A6NN06 94 aa4.45□□□□□ -1.7
POLR1A-202ENST00000409024 KRTAP9-8Q9BYQ0 159 aa4.45□□□□□ -1.7
POLR1A-202ENST00000409024 MT2AP02795 61 aa4.42□□□□□ -1.7
POLR1A-202ENST00000409024 A0A0D9SG42 100 aa4.41□□□□□ -1.7
POLR1A-202ENST00000409024 KRTAP10-10P60014 251 aa4.41□□□□□ -1.7
POLR1A-202ENST00000409024 PMAIP1Q13794 54 aa4.41□□□□□ -1.7
POLR1A-202ENST00000409024 KRTAP6-3Q3LI67 103 aa4.41□□□□□ -1.7
POLR1A-202ENST00000409024 SPRR2GQ9BYE4 73 aa4.4□□□□□ -1.71
POLR1A-202ENST00000409024 MT1FP04733 61 aa4.38□□□□□ -1.71
POLR1A-202ENST00000409024 KRTAP12-1P59990 96 aa4.38□□□□□ -1.71
POLR1A-202ENST00000409024 SVIPQ8NHG7 77 aa4.38□□□□□ -1.71
POLR1A-202ENST00000409024 NEBP20929 6669 aa4.36□□□□□ -1.71
POLR1A-202ENST00000409024 LINC01554Q52M75 96 aa4.36□□□□□ -1.71
POLR1A-202ENST00000409024 KRTAP12-2P59991 146 aa4.34□□□□□ -1.71
POLR1A-202ENST00000409024 SPINT4Q6UDR6 99 aa4.34□□□□□ -1.71
POLR1A-202ENST00000409024 LCE2BO14633 110 aa4.33□□□□□ -1.72
POLR1A-202ENST00000409024 KRTAP20-1Q3LI63 56 aa4.32□□□□□ -1.72
POLR1A-202ENST00000409024 KRTAP19-8Q3LI54 63 aa4.29□□□□□ -1.72
POLR1A-202ENST00000409024 KRTAP9-3Q9BYQ3 159 aa4.29□□□□□ -1.72
POLR1A-202ENST00000409024 KRTAP19-6Q3LI70 58 aa4.28□□□□□ -1.72
POLR1A-202ENST00000409024 MUC12Q9UKN1 5478 aa4.27□□□□□ -1.73
POLR1A-202ENST00000409024 PLAC4Q8WY50 150 aa4.27□□□□□ -1.73
POLR1A-202ENST00000409024 ROMO1P60602 79 aa4.25□□□□□ -1.73
POLR1A-202ENST00000409024 KTN1-AS1Q86SY8 53 aa4.25□□□□□ -1.73
POLR1A-202ENST00000409024 CAMK2N1Q7Z7J9 78 aa4.23□□□□□ -1.73
POLR1A-202ENST00000409024 MT1BP07438 61 aa4.17□□□□□ -1.74
POLR1A-202ENST00000409024 KMT2DO14686 5537 aa4.15□□□□□ -1.74
POLR1A-202ENST00000409024 C10orf95Q9H7T3 257 aa4.13□□□□□ -1.75
POLR1A-202ENST00000409024 KRTAP25-1Q3LHN0 102 aa4.11□□□□□ -1.75
POLR1A-202ENST00000409024 KRTAP2-3P0C7H8 128 aa4.09□□□□□ -1.75
POLR1A-202ENST00000409024 KRTAP2-4Q9BYR9 128 aa4.09□□□□□ -1.75
POLR1A-202ENST00000409024 PRO2289Q9P1D8 64 aa4.09□□□□□ -1.75
POLR1A-202ENST00000409024 MDN1Q9NU22 5596 aa4.08□□□□□ -1.76
POLR1A-202ENST00000409024 TNP1P09430 55 aa4.07□□□□□ -1.76
POLR1A-202ENST00000409024 KRTAP23-1A1A580 65 aa4.04□□□□□ -1.76
POLR1A-202ENST00000409024 KRTAP10-5P60370 271 aa4.04□□□□□ -1.76
POLR1A-202ENST00000409024 MT1XP80297 61 aa4.04□□□□□ -1.76
POLR1A-202ENST00000409024 PRAC1Q96KF2 57 aa4.04□□□□□ -1.76
POLR1A-202ENST00000409024 PP632Q6XCG6 107 aa4.01□□□□□ -1.77
POLR1A-202ENST00000409024 KRTAP5-9P26371 169 aa3.98□□□□□ -1.77
POLR1A-202ENST00000409024 GPR98Q8WXG9 6306 aa3.97□□□□□ -1.77
POLR1A-202ENST00000409024 KRTAP2-2Q9BYT5 123 aa3.92□□□□□ -1.78
POLR1A-202ENST00000409024 KRTAP2-1Q9BYU5 128 aa3.92□□□□□ -1.78
POLR1A-202ENST00000409024 KRTAP10-12P60413 245 aa3.87□□□□□ -1.79
POLR1A-202ENST00000409024 KRTAP10-7P60409 375 aaPredicted RBP3.84□□□□□ -1.79
POLR1A-202ENST00000409024 SPRR2EP22531 72 aa3.82□□□□□ -1.8
POLR1A-202ENST00000409024 SPRR2BP35325 72 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms