RNA–Protein interactions for RNA: ENST00000409006.3

KDELR3-202, Transcript of KDEL endoplasmic reticulum protein retention receptor 3, humanhuman

TSL 1 (best) BASIC

Gene KDELR3, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3-202ENST00000409006 KRTAP4-6Q9BYQ5 205 aa9.88□□□□□ -0.83
KDELR3-202ENST00000409006 ACYP1P07311 99 aa9.82□□□□□ -0.84
KDELR3-202ENST00000409006 HIST1H4AP62805 103 aaKnown RBP9.8□□□□□ -0.84
KDELR3-202ENST00000409006 CRIPTQ9P021 101 aa9.8□□□□□ -0.84
KDELR3-202ENST00000409006 NEBP20929 6669 aa9.8□□□□□ -0.84
KDELR3-202ENST00000409006 H0Y9P7 68 aa9.79□□□□□ -0.84
KDELR3-202ENST00000409006 UQCRQO14949 82 aa9.78□□□□□ -0.84
KDELR3-202ENST00000409006 FAM240AA0A1B0GVK7 77 aa9.77□□□□□ -0.85
KDELR3-202ENST00000409006 ATP5EP2Q5VTU8 51 aa9.77□□□□□ -0.85
KDELR3-202ENST00000409006 IMUPQ9GZP8 106 aa9.76□□□□□ -0.85
KDELR3-202ENST00000409006 MUC12Q9UKN1 5478 aa9.75□□□□□ -0.85
KDELR3-202ENST00000409006 NDUFC1O43677 76 aa9.72□□□□□ -0.85
KDELR3-202ENST00000409006 ATOX1O00244 68 aa9.71□□□□□ -0.86
KDELR3-202ENST00000409006 H0YAA0 97 aa9.7□□□□□ -0.86
KDELR3-202ENST00000409006 KRTAP5-9P26371 169 aa9.67□□□□□ -0.86
KDELR3-202ENST00000409006 ADM2Q7Z4H4 148 aa9.63□□□□□ -0.87
KDELR3-202ENST00000409006 LINC00208Q96KT6 92 aa9.62□□□□□ -0.87
KDELR3-202ENST00000409006 A8MUN3 132 aa9.61□□□□□ -0.87
KDELR3-202ENST00000409006 LINC00643Q86TS7 51 aa9.6□□□□□ -0.87
KDELR3-202ENST00000409006 OCR1Q9BZK8 76 aa9.55□□□□□ -0.88
KDELR3-202ENST00000409006 KRTAP20-1Q3LI63 56 aa9.51□□□□□ -0.89
KDELR3-202ENST00000409006 KMT2DO14686 5537 aa9.5□□□□□ -0.89
KDELR3-202ENST00000409006 MP68P56378 58 aa9.48□□□□□ -0.89
KDELR3-202ENST00000409006 MT1XP80297 61 aa9.48□□□□□ -0.89
KDELR3-202ENST00000409006 P0C880 135 aa9.42□□□□□ -0.9
KDELR3-202ENST00000409006 A0A1B0GV90 55 aa9.4□□□□□ -0.9
KDELR3-202ENST00000409006 PRO2289Q9P1D8 64 aa9.4□□□□□ -0.9
KDELR3-202ENST00000409006 MDN1Q9NU22 5596 aa9.39□□□□□ -0.91
KDELR3-202ENST00000409006 PLAC4Q8WY50 150 aa9.38□□□□□ -0.91
KDELR3-202ENST00000409006 R4GN34 69 aa9.36□□□□□ -0.91
KDELR3-202ENST00000409006 SPRR2FQ96RM1 72 aa9.34□□□□□ -0.91
KDELR3-202ENST00000409006 DMAC1Q96GE9 116 aa9.33□□□□□ -0.92
KDELR3-202ENST00000409006 H3BPC8 53 aa9.31□□□□□ -0.92
KDELR3-202ENST00000409006 M0QZ58 72 aa9.3□□□□□ -0.92
KDELR3-202ENST00000409006 C20orf197Q8N268 126 aa9.27□□□□□ -0.93
KDELR3-202ENST00000409006 SPRR2EP22531 72 aa9.24□□□□□ -0.93
KDELR3-202ENST00000409006 SPRR2BP35325 72 aa9.24□□□□□ -0.93
KDELR3-202ENST00000409006 SPRR2AP35326 72 aa9.24□□□□□ -0.93
KDELR3-202ENST00000409006 KRTAP8-1Q8IUC2 63 aa9.24□□□□□ -0.93
KDELR3-202ENST00000409006 KRTAP12-2P59991 146 aa9.23□□□□□ -0.93
KDELR3-202ENST00000409006 KRTAP2-3P0C7H8 128 aa9.22□□□□□ -0.93
KDELR3-202ENST00000409006 KRTAP2-4Q9BYR9 128 aa9.22□□□□□ -0.93
KDELR3-202ENST00000409006 SCGB1A1P11684 91 aa9.21□□□□□ -0.94
KDELR3-202ENST00000409006 LINC01554Q52M75 96 aa9.19□□□□□ -0.94
KDELR3-202ENST00000409006 KRTAP4-8A0A0G2JLE6 195 aa9.17□□□□□ -0.94
KDELR3-202ENST00000409006 KRTAP4-8Q9BYQ9 185 aa9.17□□□□□ -0.94
KDELR3-202ENST00000409006 J3QR89 54 aa9.16□□□□□ -0.94
KDELR3-202ENST00000409006 LCE1AQ5T7P2 110 aa9.12□□□□□ -0.95
KDELR3-202ENST00000409006 TRAV7A0A075B6U4 112 aa9.1□□□□□ -0.95
KDELR3-202ENST00000409006 KRTAP10-7P60409 375 aaPredicted RBP9.06□□□□□ -0.96
KDELR3-202ENST00000409006 ACYP2P14621 99 aa9.04□□□□□ -0.96
KDELR3-202ENST00000409006 MT-ATP8P03928 68 aa8.98□□□□□ -0.97
KDELR3-202ENST00000409006 KRTAP10-12P60413 245 aa8.98□□□□□ -0.97
KDELR3-202ENST00000409006 SPRR2DP22532 72 aa8.93□□□□□ -0.98
KDELR3-202ENST00000409006 KRTAP2-2Q9BYT5 123 aa8.92□□□□□ -0.98
KDELR3-202ENST00000409006 KRTAP2-1Q9BYU5 128 aa8.92□□□□□ -0.98
KDELR3-202ENST00000409006 SPTSSBQ8NFR3 76 aa8.91□□□□□ -0.98
KDELR3-202ENST00000409006 SMIM20Q8N5G0 67 aa8.87□□□□□ -0.99
KDELR3-202ENST00000409006 CHKB-CPT1BH3BT56 60 aa8.85□□□□□ -0.99
KDELR3-202ENST00000409006 SNURFQ9Y675 71 aa8.84□□□□□ -0.99
KDELR3-202ENST00000409006 KRTAP13-4Q3LI77 160 aa8.76□□□□□ -1.01
KDELR3-202ENST00000409006 K7ERU9 68 aa8.74□□□□□ -1.01
KDELR3-202ENST00000409006 LCE3BQ5TA77 95 aa8.71□□□□□ -1.02
KDELR3-202ENST00000409006 SPANXA2-OT1Q8N9U9 137 aa8.69□□□□□ -1.02
KDELR3-202ENST00000409006 CAMK2N1Q7Z7J9 78 aa8.57□□□□□ -1.04
KDELR3-202ENST00000409006 SERP2Q8N6R1 65 aa8.57□□□□□ -1.04
KDELR3-202ENST00000409006 COA5Q86WW8 74 aa8.5□□□□□ -1.05
KDELR3-202ENST00000409006 KRTAP19-7Q3SYF9 63 aa8.49□□□□□ -1.05
KDELR3-202ENST00000409006 A0A0D9SG42 100 aa8.42□□□□□ -1.06
KDELR3-202ENST00000409006 LCE5AQ5TCM9 118 aa8.41□□□□□ -1.06
KDELR3-202ENST00000409006 MT1EP04732 61 aa8.4□□□□□ -1.06
KDELR3-202ENST00000409006 SPATA8Q6RVD6 105 aa8.38□□□□□ -1.07
KDELR3-202ENST00000409006 SERP1Q9Y6X1 66 aa8.35□□□□□ -1.07
KDELR3-202ENST00000409006 KRTAP19-3Q7Z4W3 81 aa8.34□□□□□ -1.07
KDELR3-202ENST00000409006 SEC61GP60059 68 aa8.33□□□□□ -1.08
KDELR3-202ENST00000409006 DSTQ03001 7570 aaKnown RBP8.32□□□□□ -1.08
KDELR3-202ENST00000409006 SPINT4Q6UDR6 99 aa8.3□□□□□ -1.08
KDELR3-202ENST00000409006 A0A1B0GU33 70 aa8.27□□□□□ -1.09
KDELR3-202ENST00000409006 CYSTM1Q9H1C7 97 aa8.26□□□□□ -1.09
KDELR3-202ENST00000409006 COX7CP15954 63 aa8.25□□□□□ -1.09
KDELR3-202ENST00000409006 KRTAP12-1P59990 96 aa8.25□□□□□ -1.09
KDELR3-202ENST00000409006 KRTAP4-12Q9BQ66 201 aa8.25□□□□□ -1.09
KDELR3-202ENST00000409006 KRTAP9-9Q9BYP9 154 aa8.24□□□□□ -1.09
KDELR3-202ENST00000409006 KRTAP9-4Q9BYQ2 154 aa8.24□□□□□ -1.09
KDELR3-202ENST00000409006 KRTAP19-5Q3LI72 72 aa8.21□□□□□ -1.1
KDELR3-202ENST00000409006 H7BZZ5 65 aa8.2□□□□□ -1.1
KDELR3-202ENST00000409006 KRTAP4-9Q9BYQ8 210 aa8.2□□□□□ -1.1
KDELR3-202ENST00000409006 MT1GP13640 62 aa8.12□□□□□ -1.11
KDELR3-202ENST00000409006 A8MU10 97 aa8.05□□□□□ -1.12
KDELR3-202ENST00000409006 A0A1B0GU69 56 aa8.03□□□□□ -1.12
KDELR3-202ENST00000409006 MT1MQ8N339 61 aa8.01□□□□□ -1.13
KDELR3-202ENST00000409006 SMIM26A0A096LP01 95 aa8□□□□□ -1.13
KDELR3-202ENST00000409006 PP632Q6XCG6 107 aa8□□□□□ -1.13
KDELR3-202ENST00000409006 MT1LQ93083 61 aa8□□□□□ -1.13
KDELR3-202ENST00000409006 KRTAP4-7Q9BYR0 210 aa8□□□□□ -1.13
KDELR3-202ENST00000409006 GPR98Q8WXG9 6306 aa7.97□□□□□ -1.13
KDELR3-202ENST00000409006 LCE1DQ5T752 114 aa7.96□□□□□ -1.14
KDELR3-202ENST00000409006 LCE3AQ5TA76 89 aa7.94□□□□□ -1.14
KDELR3-202ENST00000409006 C10orf95Q9H7T3 257 aa7.94□□□□□ -1.14
KDELR3-202ENST00000409006 KRTAP4-3Q9BYR4 195 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms