RNA–Protein interactions for RNA: ENST00000405409.6

RBFOX2-205, Transcript of RNA binding fox-1 homolog 2, humanhuman

TSL 1 (best) BASIC

Gene RBFOX2, Length 6,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-205ENST00000405409 SVEP1Q4LDE5 3571 aa3.26□□□□□ -1.89
RBFOX2-205ENST00000405409 CSMD1Q96PZ7 3565 aa3.26□□□□□ -1.89
RBFOX2-205ENST00000405409 LORP23490 312 aaPredicted RBP3.23□□□□□ -1.89
RBFOX2-205ENST00000405409 LRP1BQ9NZR2 4599 aa3.23□□□□□ -1.89
RBFOX2-205ENST00000405409 KRTAP20-1Q3LI63 56 aa3.21□□□□□ -1.9
RBFOX2-205ENST00000405409 SPENQ96T58 3664 aaKnown RBP3.2□□□□□ -1.9
RBFOX2-205ENST00000405409 ALMS1Q8TCU4 4167 aa3.19□□□□□ -1.9
RBFOX2-205ENST00000405409 NBPF19A0A087WUL8 3843 aa3.18□□□□□ -1.9
RBFOX2-205ENST00000405409 RYR1P21817 5038 aa3.17□□□□□ -1.9
RBFOX2-205ENST00000405409 RYR3Q15413 4870 aa3.15□□□□□ -1.9
RBFOX2-205ENST00000405409 KIAA1109Q2LD37 5005 aa3.15□□□□□ -1.91
RBFOX2-205ENST00000405409 FAT3Q8TDW7 4589 aa3.14□□□□□ -1.91
RBFOX2-205ENST00000405409 DNAH1Q9P2D7 4330 aa3.14□□□□□ -1.91
RBFOX2-205ENST00000405409 RYR2Q92736 4967 aa3.12□□□□□ -1.91
RBFOX2-205ENST00000405409 CUBNO60494 3623 aa3.11□□□□□ -1.91
RBFOX2-205ENST00000405409 DNAH11Q96DT5 4516 aa3.09□□□□□ -1.91
RBFOX2-205ENST00000405409 KRTAP10-7P60409 375 aaPredicted RBP3.09□□□□□ -1.91
RBFOX2-205ENST00000405409 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.09□□□□□ -1.92
RBFOX2-205ENST00000405409 KRTAP6-3Q3LI67 103 aa3.07□□□□□ -1.92
RBFOX2-205ENST00000405409 KRTAP10-4P60372 401 aaPredicted RBP3.05□□□□□ -1.92
RBFOX2-205ENST00000405409 BSNQ9UPA5 3926 aa3.04□□□□□ -1.92
RBFOX2-205ENST00000405409 KRTAP2-3P0C7H8 128 aa3.04□□□□□ -1.92
RBFOX2-205ENST00000405409 KRTAP2-4Q9BYR9 128 aa3.04□□□□□ -1.92
RBFOX2-205ENST00000405409 HUWE1Q7Z6Z7 4374 aaKnown RBP3.04□□□□□ -1.92
RBFOX2-205ENST00000405409 KRTAP19-5Q3LI72 72 aa3.04□□□□□ -1.92
RBFOX2-205ENST00000405409 LCE3CQ5T5A8 94 aa3.04□□□□□ -1.92
RBFOX2-205ENST00000405409 HYDINQ4G0P3 5121 aa3.03□□□□□ -1.92
RBFOX2-205ENST00000405409 DYNC2H1Q8NCM8 4307 aaKnown RBP3.03□□□□□ -1.92
RBFOX2-205ENST00000405409 ANK3Q12955 4377 aaKnown RBP3□□□□□ -1.93
RBFOX2-205ENST00000405409 SPRR2FQ96RM1 72 aa3□□□□□ -1.93
RBFOX2-205ENST00000405409 KMT2CQ8NEZ4 4911 aaKnown RBP2.99□□□□□ -1.93
RBFOX2-205ENST00000405409 LCE2AQ5TA79 106 aaPredicted RBP2.99□□□□□ -1.93
RBFOX2-205ENST00000405409 VPS13CQ709C8 3753 aa2.97□□□□□ -1.93
RBFOX2-205ENST00000405409 LCE3BQ5TA77 95 aa2.96□□□□□ -1.94
RBFOX2-205ENST00000405409 AKAP9Q99996 3911 aa2.95□□□□□ -1.94
RBFOX2-205ENST00000405409 PLECQ15149 4684 aaKnown RBP2.95□□□□□ -1.94
RBFOX2-205ENST00000405409 ABCA13Q86UQ4 5058 aa2.95□□□□□ -1.94
RBFOX2-205ENST00000405409 LCE2BO14633 110 aa2.94□□□□□ -1.94
RBFOX2-205ENST00000405409 HERC1Q15751 4861 aa2.91□□□□□ -1.94
RBFOX2-205ENST00000405409 DNAH2Q9P225 4427 aa2.91□□□□□ -1.94
RBFOX2-205ENST00000405409 MT1HP80294 61 aa2.91□□□□□ -1.94
RBFOX2-205ENST00000405409 MYCBP2O75592 4640 aa2.9□□□□□ -1.94
RBFOX2-205ENST00000405409 GPR98Q8WXG9 6306 aa2.9□□□□□ -1.95
RBFOX2-205ENST00000405409 KRTAP12-4P60329 112 aa2.89□□□□□ -1.95
RBFOX2-205ENST00000405409 KRTAP2-2Q9BYT5 123 aa2.88□□□□□ -1.95
RBFOX2-205ENST00000405409 KRTAP2-1Q9BYU5 128 aa2.88□□□□□ -1.95
RBFOX2-205ENST00000405409 SPRR2GQ9BYE4 73 aa2.87□□□□□ -1.95
RBFOX2-205ENST00000405409 DNAH10Q8IVF4 4471 aa2.86□□□□□ -1.95
RBFOX2-205ENST00000405409 TRRAPQ9Y4A5 3859 aa2.86□□□□□ -1.95
RBFOX2-205ENST00000405409 SPRR2EP22531 72 aa2.85□□□□□ -1.95
RBFOX2-205ENST00000405409 SPRR2BP35325 72 aa2.85□□□□□ -1.95
RBFOX2-205ENST00000405409 SPRR2AP35326 72 aa2.85□□□□□ -1.95
RBFOX2-205ENST00000405409 KRTAP4-1Q9BYQ7 146 aa2.85□□□□□ -1.95
RBFOX2-205ENST00000405409 CSMD3Q7Z407 3707 aa2.85□□□□□ -1.95
RBFOX2-205ENST00000405409 MT2AP02795 61 aa2.84□□□□□ -1.95
RBFOX2-205ENST00000405409 DNAH8Q96JB1 4490 aa2.83□□□□□ -1.96
RBFOX2-205ENST00000405409 ANK2Q01484 3957 aa2.83□□□□□ -1.96
RBFOX2-205ENST00000405409 CMYA5Q8N3K9 4069 aa2.83□□□□□ -1.96
RBFOX2-205ENST00000405409 KRTAP19-1Q8IUB9 90 aa2.82□□□□□ -1.96
RBFOX2-205ENST00000405409 EPPK1P58107 5090 aaKnown RBP2.81□□□□□ -1.96
RBFOX2-205ENST00000405409 SPRR2DP22532 72 aa2.81□□□□□ -1.96
RBFOX2-205ENST00000405409 MT1GP13640 62 aa2.8□□□□□ -1.96
RBFOX2-205ENST00000405409 DNAH3Q8TD57 4116 aa2.8□□□□□ -1.96
RBFOX2-205ENST00000405409 MT1FP04733 61 aa2.79□□□□□ -1.96
RBFOX2-205ENST00000405409 VPS13DQ5THJ4 4388 aa2.79□□□□□ -1.96
RBFOX2-205ENST00000405409 ZNF469Q96JG9 3925 aaPredicted RBP2.79□□□□□ -1.96
RBFOX2-205ENST00000405409 STARD9Q9P2P6 4700 aa2.78□□□□□ -1.96
RBFOX2-205ENST00000405409 DNAH6Q9C0G6 4158 aa2.78□□□□□ -1.97
RBFOX2-205ENST00000405409 PKHD1L1Q86WI1 4243 aa2.77□□□□□ -1.97
RBFOX2-205ENST00000405409 KRTAP19-4Q3LI73 84 aa2.76□□□□□ -1.97
RBFOX2-205ENST00000405409 KRTAP19-6Q3LI70 58 aa2.76□□□□□ -1.97
RBFOX2-205ENST00000405409 DNAH17Q9UFH2 4485 aa2.75□□□□□ -1.97
RBFOX2-205ENST00000405409 LCE3DQ9BYE3 92 aa2.75□□□□□ -1.97
RBFOX2-205ENST00000405409 DNAH9Q9NYC9 4486 aa2.74□□□□□ -1.97
RBFOX2-205ENST00000405409 SPRR5A0A1B0GTR4 108 aa2.74□□□□□ -1.97
RBFOX2-205ENST00000405409 UBR4Q5T4S7 5183 aa2.73□□□□□ -1.97
RBFOX2-205ENST00000405409 NEBP20929 6669 aa2.73□□□□□ -1.97
RBFOX2-205ENST00000405409 DYNC1H1Q14204 4646 aaKnown RBP2.73□□□□□ -1.97
RBFOX2-205ENST00000405409 FRAS1Q86XX4 4008 aa2.71□□□□□ -1.98
RBFOX2-205ENST00000405409 DNAH7Q8WXX0 4024 aa2.7□□□□□ -1.98
RBFOX2-205ENST00000405409 LCE3EQ5T5B0 92 aa2.69□□□□□ -1.98
RBFOX2-205ENST00000405409 DNAH5Q8TE73 4624 aa2.67□□□□□ -1.98
RBFOX2-205ENST00000405409 LCE1AQ5T7P2 110 aa2.67□□□□□ -1.98
RBFOX2-205ENST00000405409 PRKDCP78527 4128 aaKnown RBP2.66□□□□□ -1.98
RBFOX2-205ENST00000405409 SACSQ9NZJ4 4579 aa2.63□□□□□ -1.99
RBFOX2-205ENST00000405409 APOBP04114 4563 aaKnown RBP2.63□□□□□ -1.99
RBFOX2-205ENST00000405409 PRM1P04553 51 aa2.63□□□□□ -1.99
RBFOX2-205ENST00000405409 FAT1Q14517 4588 aa2.62□□□□□ -1.99
RBFOX2-205ENST00000405409 FAT2Q9NYQ8 4349 aa2.62□□□□□ -1.99
RBFOX2-205ENST00000405409 HMCN2Q8NDA2 5059 aa2.61□□□□□ -1.99
RBFOX2-205ENST00000405409 SYNE2Q8WXH0 6885 aaKnown RBP2.61□□□□□ -1.99
RBFOX2-205ENST00000405409 MT1XP80297 61 aa2.59□□□□□ -1.99
RBFOX2-205ENST00000405409 RNF213Q63HN8 5207 aa2.59□□□□□ -2
RBFOX2-205ENST00000405409 VPS13BQ7Z7G8 4022 aa2.57□□□□□ -2
RBFOX2-205ENST00000405409 KRTAP4-8A0A0G2JLE6 195 aa2.56□□□□□ -2
RBFOX2-205ENST00000405409 KRTAP4-8Q9BYQ9 185 aa2.56□□□□□ -2
RBFOX2-205ENST00000405409 KRTAP19-8Q3LI54 63 aa2.55□□□□□ -2
RBFOX2-205ENST00000405409 LCE4AQ5TA78 99 aa2.55□□□□□ -2
RBFOX2-205ENST00000405409 MUC17Q685J3 4493 aa2.54□□□□□ -2
RBFOX2-205ENST00000405409 KRTAP19-2Q3LHN2 52 aa2.53□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 168.5 ms