RNA–Protein interactions for RNA: ENST00000405271.5

EPCAM-202, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5 BASIC

Gene EPCAM, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-202ENST00000405271 S4R3F8 94 aa10.8□□□□□ -0.68
EPCAM-202ENST00000405271 FLGP20930 4061 aaPredicted RBP10.74□□□□□ -0.69
EPCAM-202ENST00000405271 LCA10Q71F78 164 aa10.73□□□□□ -0.69
EPCAM-202ENST00000405271 M0R2T5 61 aa10.72□□□□□ -0.69
EPCAM-202ENST00000405271 LORP23490 312 aaPredicted RBP10.68□□□□□ -0.7
EPCAM-202ENST00000405271 KRTAP10-6P60371 365 aaPredicted RBP10.68□□□□□ -0.7
EPCAM-202ENST00000405271 LCE2DQ5TA82 110 aaPredicted RBP10.68□□□□□ -0.7
EPCAM-202ENST00000405271 COA5Q86WW8 74 aa10.68□□□□□ -0.7
EPCAM-202ENST00000405271 CHKB-CPT1BH3BT56 60 aa10.67□□□□□ -0.7
EPCAM-202ENST00000405271 KRTAP3-3Q9BYR6 98 aa10.63□□□□□ -0.71
EPCAM-202ENST00000405271 CSAG1Q6PB30 78 aa10.59□□□□□ -0.71
EPCAM-202ENST00000405271 SPTSSBQ8NFR3 76 aa10.58□□□□□ -0.72
EPCAM-202ENST00000405271 FSIP2Q5CZC0 6907 aa10.54□□□□□ -0.72
EPCAM-202ENST00000405271 KRTAP9-6A0A140TA67 174 aa10.53□□□□□ -0.72
EPCAM-202ENST00000405271 SERP1Q9Y6X1 66 aa10.52□□□□□ -0.73
EPCAM-202ENST00000405271 KRTAP9-8Q9BYQ0 159 aa10.37□□□□□ -0.75
EPCAM-202ENST00000405271 CRCT1Q9UGL9 99 aa10.37□□□□□ -0.75
EPCAM-202ENST00000405271 H0YAA0 97 aa10.36□□□□□ -0.75
EPCAM-202ENST00000405271 RPS28P62857 69 aaKnown RBP10.32□□□□□ -0.76
EPCAM-202ENST00000405271 MT2AP02795 61 aa10.24□□□□□ -0.77
EPCAM-202ENST00000405271 ADM2Q7Z4H4 148 aa10.23□□□□□ -0.77
EPCAM-202ENST00000405271 SMIM26A0A096LP01 95 aa10.17□□□□□ -0.78
EPCAM-202ENST00000405271 SEC61GP60059 68 aa10.17□□□□□ -0.78
EPCAM-202ENST00000405271 MT1FP04733 61 aa10.17□□□□□ -0.78
EPCAM-202ENST00000405271 KRTAP3-2Q9BYR7 98 aa10.16□□□□□ -0.78
EPCAM-202ENST00000405271 LINC01558Q9Y6Z2 57 aa10.16□□□□□ -0.78
EPCAM-202ENST00000405271 KRTAP10-10P60014 251 aa10.14□□□□□ -0.79
EPCAM-202ENST00000405271 A0A1B0GU69 56 aa10.12□□□□□ -0.79
EPCAM-202ENST00000405271 V9GYY9 64 aa10.12□□□□□ -0.79
EPCAM-202ENST00000405271 P0C880 135 aa10.11□□□□□ -0.79
EPCAM-202ENST00000405271 Q1T7F1 81 aa10.07□□□□□ -0.8
EPCAM-202ENST00000405271 PRR15LQ9BU68 103 aa10.07□□□□□ -0.8
EPCAM-202ENST00000405271 USH2AO75445 5202 aa10.06□□□□□ -0.8
EPCAM-202ENST00000405271 CRIPTQ9P021 101 aa10.06□□□□□ -0.8
EPCAM-202ENST00000405271 KRTAP9-3Q9BYQ3 159 aa10.03□□□□□ -0.8
EPCAM-202ENST00000405271 LCE2BO14633 110 aa9.97□□□□□ -0.81
EPCAM-202ENST00000405271 SSPOA2VEC9 5147 aa9.94□□□□□ -0.82
EPCAM-202ENST00000405271 R4GN34 69 aa9.93□□□□□ -0.82
EPCAM-202ENST00000405271 A0A1B0GU33 70 aa9.91□□□□□ -0.82
EPCAM-202ENST00000405271 M0QZ58 72 aa9.89□□□□□ -0.83
EPCAM-202ENST00000405271 SPRR2GQ9BYE4 73 aa9.88□□□□□ -0.83
EPCAM-202ENST00000405271 PSPHP1O15172 72 aa9.87□□□□□ -0.83
EPCAM-202ENST00000405271 KRTAP19-1Q8IUB9 90 aa9.85□□□□□ -0.83
EPCAM-202ENST00000405271 Q5VV11 94 aa9.81□□□□□ -0.84
EPCAM-202ENST00000405271 KRTAP13-4Q3LI77 160 aa9.78□□□□□ -0.84
EPCAM-202ENST00000405271 UQCR11O14957 56 aa9.75□□□□□ -0.85
EPCAM-202ENST00000405271 FCGBPQ9Y6R7 5405 aaPredicted RBP9.73□□□□□ -0.85
EPCAM-202ENST00000405271 SPATA8Q6RVD6 105 aa9.72□□□□□ -0.85
EPCAM-202ENST00000405271 KRTAP19-8Q3LI54 63 aa9.69□□□□□ -0.86
EPCAM-202ENST00000405271 LINC01554Q52M75 96 aa9.67□□□□□ -0.86
EPCAM-202ENST00000405271 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.63□□□□□ -0.87
EPCAM-202ENST00000405271 A6NED7 52 aa9.61□□□□□ -0.87
EPCAM-202ENST00000405271 MIR22HGQ0VDD5 57 aa9.6□□□□□ -0.87
EPCAM-202ENST00000405271 A6NN06 94 aa9.58□□□□□ -0.88
EPCAM-202ENST00000405271 KRTAP19-6Q3LI70 58 aa9.58□□□□□ -0.88
EPCAM-202ENST00000405271 A0A0D9SG42 100 aa9.56□□□□□ -0.88
EPCAM-202ENST00000405271 MT1BP07438 61 aa9.56□□□□□ -0.88
EPCAM-202ENST00000405271 A8MU10 97 aa9.52□□□□□ -0.88
EPCAM-202ENST00000405271 KRTAP9-7A8MTY7 169 aa9.48□□□□□ -0.89
EPCAM-202ENST00000405271 PLAC4Q8WY50 150 aa9.48□□□□□ -0.89
EPCAM-202ENST00000405271 KRTAP12-1P59990 96 aa9.42□□□□□ -0.9
EPCAM-202ENST00000405271 MACF1Q9UPN3 7388 aaKnown RBP9.41□□□□□ -0.9
EPCAM-202ENST00000405271 CDC42SE1Q9NRR8 79 aa9.41□□□□□ -0.9
EPCAM-202ENST00000405271 SPINT4Q6UDR6 99 aa9.38□□□□□ -0.91
EPCAM-202ENST00000405271 KRTAP12-2P59991 146 aa9.36□□□□□ -0.91
EPCAM-202ENST00000405271 SYNE2Q8WXH0 6885 aaKnown RBP9.31□□□□□ -0.92
EPCAM-202ENST00000405271 K7ERS5 55 aa9.27□□□□□ -0.93
EPCAM-202ENST00000405271 CAMK2N1Q7Z7J9 78 aa9.26□□□□□ -0.93
EPCAM-202ENST00000405271 BRK1Q8WUW1 75 aa9.22□□□□□ -0.93
EPCAM-202ENST00000405271 PRO2289Q9P1D8 64 aa9.18□□□□□ -0.94
EPCAM-202ENST00000405271 KRTAP10-5P60370 271 aa9.17□□□□□ -0.94
EPCAM-202ENST00000405271 MT1XP80297 61 aa9.16□□□□□ -0.94
EPCAM-202ENST00000405271 KRTAP6-3Q3LI67 103 aa9.04□□□□□ -0.96
EPCAM-202ENST00000405271 C10orf95Q9H7T3 257 aa8.91□□□□□ -0.98
EPCAM-202ENST00000405271 PRO0628Q9UI54 55 aa8.85□□□□□ -0.99
EPCAM-202ENST00000405271 ROMO1P60602 79 aa8.79□□□□□ -1
EPCAM-202ENST00000405271 SVIPQ8NHG7 77 aa8.77□□□□□ -1.01
EPCAM-202ENST00000405271 TNP1P09430 55 aa8.76□□□□□ -1.01
EPCAM-202ENST00000405271 KRTAP10-7P60409 375 aaPredicted RBP8.75□□□□□ -1.01
EPCAM-202ENST00000405271 MUC12Q9UKN1 5478 aa8.75□□□□□ -1.01
EPCAM-202ENST00000405271 KRTAP10-12P60413 245 aa8.72□□□□□ -1.01
EPCAM-202ENST00000405271 PMAIP1Q13794 54 aa8.7□□□□□ -1.02
EPCAM-202ENST00000405271 KRTAP25-1Q3LHN0 102 aa8.69□□□□□ -1.02
EPCAM-202ENST00000405271 NEBP20929 6669 aa8.68□□□□□ -1.02
EPCAM-202ENST00000405271 KRTAP5-9P26371 169 aa8.67□□□□□ -1.02
EPCAM-202ENST00000405271 KMT2DO14686 5537 aa8.65□□□□□ -1.02
EPCAM-202ENST00000405271 MDN1Q9NU22 5596 aa8.56□□□□□ -1.04
EPCAM-202ENST00000405271 KRTAP4-8A0A0G2JLE6 195 aa8.48□□□□□ -1.05
EPCAM-202ENST00000405271 KRTAP4-8Q9BYQ9 185 aa8.48□□□□□ -1.05
EPCAM-202ENST00000405271 SPRR2FQ96RM1 72 aa8.44□□□□□ -1.06
EPCAM-202ENST00000405271 KRTAP8-1Q8IUC2 63 aa8.43□□□□□ -1.06
EPCAM-202ENST00000405271 KRTAP23-1A1A580 65 aa8.42□□□□□ -1.06
EPCAM-202ENST00000405271 LCE3AQ5TA76 89 aa8.42□□□□□ -1.06
EPCAM-202ENST00000405271 PP632Q6XCG6 107 aa8.33□□□□□ -1.08
EPCAM-202ENST00000405271 KRTAP20-1Q3LI63 56 aa8.31□□□□□ -1.08
EPCAM-202ENST00000405271 SPRR2EP22531 72 aa8.27□□□□□ -1.09
EPCAM-202ENST00000405271 SPRR2BP35325 72 aa8.27□□□□□ -1.09
EPCAM-202ENST00000405271 SPRR2AP35326 72 aa8.27□□□□□ -1.09
EPCAM-202ENST00000405271 KTN1-AS1Q86SY8 53 aa8.26□□□□□ -1.09
EPCAM-202ENST00000405271 LCE1AQ5T7P2 110 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms