RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 RBM12B-AS1Q9P1G2 102 aa2.27□□□□□ -2.05
HMGB3P19-201ENST00000403971 A8MWP4 228 aa2.26□□□□□ -2.05
HMGB3P19-201ENST00000403971 NDUFB1O75438 58 aa2.26□□□□□ -2.05
HMGB3P19-201ENST00000403971 KRTAP25-1Q3LHN0 102 aa2.26□□□□□ -2.05
HMGB3P19-201ENST00000403971 PCLOQ9Y6V0 5065 aa2.26□□□□□ -2.05
HMGB3P19-201ENST00000403971 C8orf87E5RJ46 101 aa2.25□□□□□ -2.05
HMGB3P19-201ENST00000403971 PRR15Q8IV56 129 aa2.25□□□□□ -2.05
HMGB3P19-201ENST00000403971 IGKV3D-7A0A0C4DH55 119 aa2.24□□□□□ -2.05
HMGB3P19-201ENST00000403971 RETNLBQ9BQ08 111 aa2.24□□□□□ -2.05
HMGB3P19-201ENST00000403971 K7EQZ3 153 aa2.23□□□□□ -2.05
HMGB3P19-201ENST00000403971 TPRXLQ17RH7 258 aa2.23□□□□□ -2.05
HMGB3P19-201ENST00000403971 LRP2P98164 4655 aa2.23□□□□□ -2.05
HMGB3P19-201ENST00000403971 HERC1Q15751 4861 aa2.23□□□□□ -2.05
HMGB3P19-201ENST00000403971 MT-ATP8P03928 68 aa2.22□□□□□ -2.05
HMGB3P19-201ENST00000403971 LINC00313P59037 77 aa2.22□□□□□ -2.05
HMGB3P19-201ENST00000403971 HIST1H4AP62805 103 aaKnown RBP2.22□□□□□ -2.05
HMGB3P19-201ENST00000403971 KRTAP6-3Q3LI67 103 aa2.22□□□□□ -2.05
HMGB3P19-201ENST00000403971 LPAP08519 4548 aa2.21□□□□□ -2.06
HMGB3P19-201ENST00000403971 MMP24-AS1A0A0U1RRL7 71 aa2.21□□□□□ -2.06
HMGB3P19-201ENST00000403971 hDV103S1A0JD37 113 aa2.21□□□□□ -2.06
HMGB3P19-201ENST00000403971 HCG22E2RYF7 251 aa2.21□□□□□ -2.06
HMGB3P19-201ENST00000403971 KRTAP5-2Q701N4 177 aa2.21□□□□□ -2.06
HMGB3P19-201ENST00000403971 TMEM254Q8TBM7 123 aa2.21□□□□□ -2.06
HMGB3P19-201ENST00000403971 K7ERS5 55 aa2.2□□□□□ -2.06
HMGB3P19-201ENST00000403971 CASC2Q6XLA1 102 aa2.2□□□□□ -2.06
HMGB3P19-201ENST00000403971 C20orf166-AS1Q96NR2 134 aa2.2□□□□□ -2.06
HMGB3P19-201ENST00000403971 MRPL34Q9BQ48 92 aaKnown RBP2.2□□□□□ -2.06
HMGB3P19-201ENST00000403971 ANAPC13Q9BS18 74 aa2.2□□□□□ -2.06
HMGB3P19-201ENST00000403971 A0A087WVE0 104 aa2.19□□□□□ -2.06
HMGB3P19-201ENST00000403971 C9orf92A6NGG3 77 aa2.19□□□□□ -2.06
HMGB3P19-201ENST00000403971 KRTAP12-3P60328 96 aa2.19□□□□□ -2.06
HMGB3P19-201ENST00000403971 WFDC13Q8IUB5 93 aa2.19□□□□□ -2.06
HMGB3P19-201ENST00000403971 TP53AIP1Q9HCN2 124 aa2.19□□□□□ -2.06
HMGB3P19-201ENST00000403971 HMCN2Q8NDA2 5059 aa2.19□□□□□ -2.06
HMGB3P19-201ENST00000403971 SCGB1A1P11684 91 aa2.18□□□□□ -2.06
HMGB3P19-201ENST00000403971 SMIM20Q8N5G0 67 aa2.18□□□□□ -2.06
HMGB3P19-201ENST00000403971 ZCCHC13Q8WW36 166 aaKnown RBP2.18□□□□□ -2.06
HMGB3P19-201ENST00000403971 MUC17Q685J3 4493 aa2.18□□□□□ -2.06
HMGB3P19-201ENST00000403971 FAM236AA0A1B0GUQ0 79 aa2.17□□□□□ -2.06
HMGB3P19-201ENST00000403971 FAM236BA0A1B0GV22 79 aa2.17□□□□□ -2.06
HMGB3P19-201ENST00000403971 ATOX1O00244 68 aa2.17□□□□□ -2.06
HMGB3P19-201ENST00000403971 RPL37P61927 97 aaKnown RBP2.17□□□□□ -2.06
HMGB3P19-201ENST00000403971 UQCRQO14949 82 aa2.16□□□□□ -2.06
HMGB3P19-201ENST00000403971 TRAV7A0A075B6U4 112 aa2.15□□□□□ -2.07
HMGB3P19-201ENST00000403971 A6NED7 52 aa2.15□□□□□ -2.07
HMGB3P19-201ENST00000403971 ATP11AUNQ6ZP68 121 aa2.15□□□□□ -2.07
HMGB3P19-201ENST00000403971 TRAV22A0A0B4J277 110 aa2.14□□□□□ -2.07
HMGB3P19-201ENST00000403971 H3BPC8 53 aa2.14□□□□□ -2.07
HMGB3P19-201ENST00000403971 SERP2Q8N6R1 65 aa2.13□□□□□ -2.07
HMGB3P19-201ENST00000403971 LOC101927531A0A1B0GV80 90 aa2.12□□□□□ -2.07
HMGB3P19-201ENST00000403971 H0Y9P7 68 aa2.12□□□□□ -2.07
HMGB3P19-201ENST00000403971 COX7CP15954 63 aa2.12□□□□□ -2.07
HMGB3P19-201ENST00000403971 MP68P56378 58 aa2.12□□□□□ -2.07
HMGB3P19-201ENST00000403971 PCOTHQ58A44 107 aa2.12□□□□□ -2.07
HMGB3P19-201ENST00000403971 A0A1B0GU33 70 aa2.11□□□□□ -2.07
HMGB3P19-201ENST00000403971 C7orf65Q6ZTY9 151 aa2.11□□□□□ -2.07
HMGB3P19-201ENST00000403971 KLKP1Q107X0 134 aa2.1□□□□□ -2.07
HMGB3P19-201ENST00000403971 KRTAP5-7Q6L8G8 165 aa2.1□□□□□ -2.07
HMGB3P19-201ENST00000403971 LINC00208Q96KT6 92 aa2.1□□□□□ -2.07
HMGB3P19-201ENST00000403971 CYP4F30PQ9H0H9 118 aa2.1□□□□□ -2.07
HMGB3P19-201ENST00000403971 SPINK7P58062 85 aa2.09□□□□□ -2.07
HMGB3P19-201ENST00000403971 NDUFC1O43677 76 aa2.08□□□□□ -2.08
HMGB3P19-201ENST00000403971 KRTAP12-4P60329 112 aa2.08□□□□□ -2.08
HMGB3P19-201ENST00000403971 C20orf197Q8N268 126 aa2.08□□□□□ -2.08
HMGB3P19-201ENST00000403971 KRTAP4-1Q9BYQ7 146 aa2.06□□□□□ -2.08
HMGB3P19-201ENST00000403971 SNURFQ9Y675 71 aa2.06□□□□□ -2.08
HMGB3P19-201ENST00000403971 UBR4Q5T4S7 5183 aa2.05□□□□□ -2.08
HMGB3P19-201ENST00000403971 CCDC179H3BU77 68 aa2.05□□□□□ -2.08
HMGB3P19-201ENST00000403971 COX6B2Q6YFQ2 88 aa2.05□□□□□ -2.08
HMGB3P19-201ENST00000403971 A8MUN3 132 aa2.04□□□□□ -2.08
HMGB3P19-201ENST00000403971 H7BZZ5 65 aa2.04□□□□□ -2.08
HMGB3P19-201ENST00000403971 C4orf26Q17RF5 130 aa2.03□□□□□ -2.08
HMGB3P19-201ENST00000403971 KRTAP19-2Q3LHN2 52 aa2.03□□□□□ -2.08
HMGB3P19-201ENST00000403971 DMAC1Q96GE9 116 aa2.03□□□□□ -2.08
HMGB3P19-201ENST00000403971 MUC2Q02817 5179 aa2.03□□□□□ -2.09
HMGB3P19-201ENST00000403971 FAT4Q6V0I7 4981 aa2.02□□□□□ -2.09
HMGB3P19-201ENST00000403971 ATP5EP56381 51 aaPredicted RBP2.02□□□□□ -2.09
HMGB3P19-201ENST00000403971 TMEM258P61165 79 aa2.02□□□□□ -2.09
HMGB3P19-201ENST00000403971 CYSTM1Q9H1C7 97 aa2.02□□□□□ -2.09
HMGB3P19-201ENST00000403971 FLGP20930 4061 aaPredicted RBP2.01□□□□□ -2.09
HMGB3P19-201ENST00000403971 FAM236DA0A1B0GTK5 79 aa2.01□□□□□ -2.09
HMGB3P19-201ENST00000403971 FAM236CP0DP71 79 aa2.01□□□□□ -2.09
HMGB3P19-201ENST00000403971 ACYP2P14621 99 aa2.01□□□□□ -2.09
HMGB3P19-201ENST00000403971 H1FX-AS1Q4G0G2 97 aa2.01□□□□□ -2.09
HMGB3P19-201ENST00000403971 RNF213Q63HN8 5207 aa2□□□□□ -2.09
HMGB3P19-201ENST00000403971 MUC19Q7Z5P9 8384 aa1.98□□□□□ -2.09
HMGB3P19-201ENST00000403971 S4R3F8 94 aa1.97□□□□□ -2.09
HMGB3P19-201ENST00000403971 MT1HP80294 61 aa1.96□□□□□ -2.1
HMGB3P19-201ENST00000403971 LCA10Q71F78 164 aa1.96□□□□□ -2.1
HMGB3P19-201ENST00000403971 COA5Q86WW8 74 aa1.96□□□□□ -2.1
HMGB3P19-201ENST00000403971 CHKB-CPT1BH3BT56 60 aa1.95□□□□□ -2.1
HMGB3P19-201ENST00000403971 KRTAP12-1P59990 96 aa1.95□□□□□ -2.1
HMGB3P19-201ENST00000403971 CSAG1Q6PB30 78 aa1.95□□□□□ -2.1
HMGB3P19-201ENST00000403971 SPTSSBQ8NFR3 76 aa1.95□□□□□ -2.1
HMGB3P19-201ENST00000403971 SERP1Q9Y6X1 66 aa1.95□□□□□ -2.1
HMGB3P19-201ENST00000403971 RPS28P62857 69 aaKnown RBP1.94□□□□□ -2.1
HMGB3P19-201ENST00000403971 H0YAA0 97 aa1.92□□□□□ -2.1
HMGB3P19-201ENST00000403971 M0R2T5 61 aa1.92□□□□□ -2.1
HMGB3P19-201ENST00000403971 LINC01558Q9Y6Z2 57 aa1.88□□□□□ -2.11
HMGB3P19-201ENST00000403971 Q1T7F1 81 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms