RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 A8MUN3 132 aa8.84□□□□□ -0.99
RTN4-207ENST00000402434 FAM236AA0A1B0GUQ0 79 aa8.79□□□□□ -1
RTN4-207ENST00000402434 FAM236BA0A1B0GV22 79 aa8.79□□□□□ -1
RTN4-207ENST00000402434 KRTAP19-1Q8IUB9 90 aa8.78□□□□□ -1
RTN4-207ENST00000402434 NDUFC1O43677 76 aa8.76□□□□□ -1.01
RTN4-207ENST00000402434 SMIM20Q8N5G0 67 aa8.73□□□□□ -1.01
RTN4-207ENST00000402434 FCGBPQ9Y6R7 5405 aaPredicted RBP8.72□□□□□ -1.01
RTN4-207ENST00000402434 TRAV7A0A075B6U4 112 aa8.71□□□□□ -1.01
RTN4-207ENST00000402434 KRTAP19-6Q3LI70 58 aa8.7□□□□□ -1.02
RTN4-207ENST00000402434 SPRR2GQ9BYE4 73 aa8.68□□□□□ -1.02
RTN4-207ENST00000402434 H0YAA0 97 aa8.67□□□□□ -1.02
RTN4-207ENST00000402434 DMAC1Q96GE9 116 aa8.66□□□□□ -1.02
RTN4-207ENST00000402434 CRIPTQ9P021 101 aa8.6□□□□□ -1.03
RTN4-207ENST00000402434 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.59□□□□□ -1.03
RTN4-207ENST00000402434 KRTAP19-8Q3LI54 63 aa8.58□□□□□ -1.04
RTN4-207ENST00000402434 MT1BP07438 61 aa8.55□□□□□ -1.04
RTN4-207ENST00000402434 Q5VV11 94 aa8.53□□□□□ -1.04
RTN4-207ENST00000402434 ADM2Q7Z4H4 148 aa8.52□□□□□ -1.05
RTN4-207ENST00000402434 SERP2Q8N6R1 65 aa8.5□□□□□ -1.05
RTN4-207ENST00000402434 SNURFQ9Y675 71 aa8.49□□□□□ -1.05
RTN4-207ENST00000402434 ACYP2P14621 99 aa8.48□□□□□ -1.05
RTN4-207ENST00000402434 C20orf197Q8N268 126 aa8.43□□□□□ -1.06
RTN4-207ENST00000402434 KRTAP9-7A8MTY7 169 aa8.41□□□□□ -1.06
RTN4-207ENST00000402434 SPANXA2-OT1Q8N9U9 137 aa8.39□□□□□ -1.07
RTN4-207ENST00000402434 P0C880 135 aa8.38□□□□□ -1.07
RTN4-207ENST00000402434 ANAPC13Q9BS18 74 aa8.38□□□□□ -1.07
RTN4-207ENST00000402434 KRTAP3-2Q9BYR7 98 aa8.36□□□□□ -1.07
RTN4-207ENST00000402434 A6NN06 94 aa8.34□□□□□ -1.07
RTN4-207ENST00000402434 COX7CP15954 63 aa8.33□□□□□ -1.08
RTN4-207ENST00000402434 SPTSSBQ8NFR3 76 aa8.32□□□□□ -1.08
RTN4-207ENST00000402434 KRTAP10-5P60370 271 aa8.32□□□□□ -1.08
RTN4-207ENST00000402434 MACF1Q9UPN3 7388 aaKnown RBP8.31□□□□□ -1.08
RTN4-207ENST00000402434 PCP4P48539 62 aa8.3□□□□□ -1.08
RTN4-207ENST00000402434 R4GN34 69 aa8.3□□□□□ -1.08
RTN4-207ENST00000402434 CHKB-CPT1BH3BT56 60 aa8.29□□□□□ -1.08
RTN4-207ENST00000402434 CCDC179H3BU77 68 aa8.24□□□□□ -1.09
RTN4-207ENST00000402434 CYSTM1Q9H1C7 97 aa8.24□□□□□ -1.09
RTN4-207ENST00000402434 SYNE2Q8WXH0 6885 aaKnown RBP8.23□□□□□ -1.09
RTN4-207ENST00000402434 M0QZ58 72 aa8.23□□□□□ -1.09
RTN4-207ENST00000402434 PLAC4Q8WY50 150 aa8.14□□□□□ -1.11
RTN4-207ENST00000402434 H7BZZ5 65 aa8.13□□□□□ -1.11
RTN4-207ENST00000402434 KRTAP6-3Q3LI67 103 aa8.12□□□□□ -1.11
RTN4-207ENST00000402434 COA5Q86WW8 74 aa8.11□□□□□ -1.11
RTN4-207ENST00000402434 LINC01554Q52M75 96 aa8.08□□□□□ -1.12
RTN4-207ENST00000402434 MT1XP80297 61 aa8.07□□□□□ -1.12
RTN4-207ENST00000402434 PRO2289Q9P1D8 64 aa8.07□□□□□ -1.12
RTN4-207ENST00000402434 KRTAP13-4Q3LI77 160 aa7.91□□□□□ -1.14
RTN4-207ENST00000402434 TMEM258P61165 79 aa7.9□□□□□ -1.14
RTN4-207ENST00000402434 SEC61GP60059 68 aa7.88□□□□□ -1.15
RTN4-207ENST00000402434 KRTAP5-9P26371 169 aa7.86□□□□□ -1.15
RTN4-207ENST00000402434 SERP1Q9Y6X1 66 aa7.86□□□□□ -1.15
RTN4-207ENST00000402434 KRTAP12-2P59991 146 aa7.85□□□□□ -1.15
RTN4-207ENST00000402434 ATP5EP56381 51 aaPredicted RBP7.82□□□□□ -1.16
RTN4-207ENST00000402434 KMT2DO14686 5537 aa7.77□□□□□ -1.16
RTN4-207ENST00000402434 MUC12Q9UKN1 5478 aa7.75□□□□□ -1.17
RTN4-207ENST00000402434 A0A1B0GU33 70 aa7.75□□□□□ -1.17
RTN4-207ENST00000402434 NEBP20929 6669 aa7.71□□□□□ -1.18
RTN4-207ENST00000402434 SPATA8Q6RVD6 105 aa7.7□□□□□ -1.18
RTN4-207ENST00000402434 KRTAP10-7P60409 375 aaPredicted RBP7.69□□□□□ -1.18
RTN4-207ENST00000402434 A0A1B0GU69 56 aa7.68□□□□□ -1.18
RTN4-207ENST00000402434 KRTAP10-12P60413 245 aa7.68□□□□□ -1.18
RTN4-207ENST00000402434 KRTAP8-1Q8IUC2 63 aa7.68□□□□□ -1.18
RTN4-207ENST00000402434 A0A0D9SG42 100 aa7.65□□□□□ -1.18
RTN4-207ENST00000402434 KRTAP4-8A0A0G2JLE6 195 aa7.65□□□□□ -1.18
RTN4-207ENST00000402434 KRTAP4-8Q9BYQ9 185 aa7.65□□□□□ -1.18
RTN4-207ENST00000402434 CAMK2N1Q7Z7J9 78 aa7.64□□□□□ -1.19
RTN4-207ENST00000402434 MDN1Q9NU22 5596 aa7.63□□□□□ -1.19
RTN4-207ENST00000402434 RPS28P62857 69 aaKnown RBP7.62□□□□□ -1.19
RTN4-207ENST00000402434 SPRR2FQ96RM1 72 aa7.62□□□□□ -1.19
RTN4-207ENST00000402434 KRTAP12-1P59990 96 aa7.55□□□□□ -1.2
RTN4-207ENST00000402434 SPINT4Q6UDR6 99 aa7.53□□□□□ -1.2
RTN4-207ENST00000402434 SMIM26A0A096LP01 95 aa7.52□□□□□ -1.21
RTN4-207ENST00000402434 LINC01558Q9Y6Z2 57 aa7.52□□□□□ -1.21
RTN4-207ENST00000402434 PRR15LQ9BU68 103 aa7.5□□□□□ -1.21
RTN4-207ENST00000402434 A8MU10 97 aa7.45□□□□□ -1.22
RTN4-207ENST00000402434 SPRR2EP22531 72 aa7.45□□□□□ -1.22
RTN4-207ENST00000402434 SPRR2BP35325 72 aa7.45□□□□□ -1.22
RTN4-207ENST00000402434 SPRR2AP35326 72 aa7.45□□□□□ -1.22
RTN4-207ENST00000402434 LCE1AQ5T7P2 110 aa7.43□□□□□ -1.22
RTN4-207ENST00000402434 KRTAP20-1Q3LI63 56 aa7.37□□□□□ -1.23
RTN4-207ENST00000402434 Q1T7F1 81 aa7.34□□□□□ -1.23
RTN4-207ENST00000402434 V9GYY9 64 aa7.31□□□□□ -1.24
RTN4-207ENST00000402434 UQCR11O14957 56 aa7.29□□□□□ -1.24
RTN4-207ENST00000402434 KRTAP2-3P0C7H8 128 aa7.27□□□□□ -1.25
RTN4-207ENST00000402434 KRTAP2-4Q9BYR9 128 aa7.27□□□□□ -1.25
RTN4-207ENST00000402434 PSPHP1O15172 72 aa7.24□□□□□ -1.25
RTN4-207ENST00000402434 KRTAP19-7Q3SYF9 63 aa7.22□□□□□ -1.25
RTN4-207ENST00000402434 SPRR2DP22532 72 aa7.2□□□□□ -1.26
RTN4-207ENST00000402434 C10orf95Q9H7T3 257 aa7.2□□□□□ -1.26
RTN4-207ENST00000402434 MT1EP04732 61 aa7.13□□□□□ -1.27
RTN4-207ENST00000402434 MIR22HGQ0VDD5 57 aa7.13□□□□□ -1.27
RTN4-207ENST00000402434 TNP1P09430 55 aa7.12□□□□□ -1.27
RTN4-207ENST00000402434 KRTAP19-5Q3LI72 72 aa7.07□□□□□ -1.28
RTN4-207ENST00000402434 KRTAP2-2Q9BYT5 123 aa7.06□□□□□ -1.28
RTN4-207ENST00000402434 KRTAP2-1Q9BYU5 128 aa7.06□□□□□ -1.28
RTN4-207ENST00000402434 LCE5AQ5TCM9 118 aa7.04□□□□□ -1.28
RTN4-207ENST00000402434 KRTAP19-3Q7Z4W3 81 aa7.03□□□□□ -1.28
RTN4-207ENST00000402434 LCE3AQ5TA76 89 aa7.01□□□□□ -1.29
RTN4-207ENST00000402434 LCE3BQ5TA77 95 aa7□□□□□ -1.29
RTN4-207ENST00000402434 A6NED7 52 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms