RNA–Protein interactions for RNA: ENST00000400259.5

CDC42-203, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDC42, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-203ENST00000400259 DMBT1Q9UGM3 2413 aaPredicted RBP8.31□□□□□ -1.08
CDC42-203ENST00000400259 RPL37P61927 97 aaKnown RBP8.31□□□□□ -1.08
CDC42-203ENST00000400259 XP32Q5T750 250 aa8.28□□□□□ -1.08
CDC42-203ENST00000400259 MIR22HGQ0VDD5 57 aa8.26□□□□□ -1.09
CDC42-203ENST00000400259 COX6B2Q6YFQ2 88 aa8.25□□□□□ -1.09
CDC42-203ENST00000400259 MYCBP2O75592 4640 aa8.25□□□□□ -1.09
CDC42-203ENST00000400259 UQCR11O14957 56 aa8.23□□□□□ -1.09
CDC42-203ENST00000400259 EPPK1P58107 5090 aaKnown RBP8.18□□□□□ -1.1
CDC42-203ENST00000400259 ROMO1P60602 79 aa8.13□□□□□ -1.11
CDC42-203ENST00000400259 TPRXLQ17RH7 258 aa8.13□□□□□ -1.11
CDC42-203ENST00000400259 KRTAP4-5Q9BYR2 181 aa8.09□□□□□ -1.11
CDC42-203ENST00000400259 KRTAP25-1Q3LHN0 102 aa8.06□□□□□ -1.12
CDC42-203ENST00000400259 KRTAP3-3Q9BYR6 98 aa7.99□□□□□ -1.13
CDC42-203ENST00000400259 LPAP08519 4548 aa7.98□□□□□ -1.13
CDC42-203ENST00000400259 H0YAA0 97 aa7.97□□□□□ -1.13
CDC42-203ENST00000400259 A0A1B0GU33 70 aa7.95□□□□□ -1.14
CDC42-203ENST00000400259 H1FX-AS1Q4G0G2 97 aa7.95□□□□□ -1.14
CDC42-203ENST00000400259 S4R3F8 94 aa7.95□□□□□ -1.14
CDC42-203ENST00000400259 LRP2P98164 4655 aa7.92□□□□□ -1.14
CDC42-203ENST00000400259 ABCA13Q86UQ4 5058 aa7.87□□□□□ -1.15
CDC42-203ENST00000400259 P0C880 135 aa7.87□□□□□ -1.15
CDC42-203ENST00000400259 KRTAP10-6P60371 365 aaPredicted RBP7.84□□□□□ -1.15
CDC42-203ENST00000400259 J3QL48 77 aa7.83□□□□□ -1.16
CDC42-203ENST00000400259 KRTAP3-2Q9BYR7 98 aa7.82□□□□□ -1.16
CDC42-203ENST00000400259 SEC61BP60468 96 aaKnown RBP7.81□□□□□ -1.16
CDC42-203ENST00000400259 HERC2O95714 4834 aa7.74□□□□□ -1.17
CDC42-203ENST00000400259 KRTAP13-4Q3LI77 160 aa7.72□□□□□ -1.17
CDC42-203ENST00000400259 BIRC6Q9NR09 4857 aa7.71□□□□□ -1.17
CDC42-203ENST00000400259 LCE2DQ5TA82 110 aaPredicted RBP7.71□□□□□ -1.18
CDC42-203ENST00000400259 A0A0A0MQY5 61 aa7.7□□□□□ -1.18
CDC42-203ENST00000400259 KRTAP4-1Q9BYQ7 146 aa7.65□□□□□ -1.18
CDC42-203ENST00000400259 MUC17Q685J3 4493 aa7.64□□□□□ -1.19
CDC42-203ENST00000400259 K7ERS5 55 aa7.63□□□□□ -1.19
CDC42-203ENST00000400259 A0A0D9SG42 100 aa7.61□□□□□ -1.19
CDC42-203ENST00000400259 SPINT4Q6UDR6 99 aa7.59□□□□□ -1.19
CDC42-203ENST00000400259 CRIPTQ9P021 101 aa7.55□□□□□ -1.2
CDC42-203ENST00000400259 NDUFAF8A1L188 74 aa7.55□□□□□ -1.2
CDC42-203ENST00000400259 KRTAP19-2Q3LHN2 52 aa7.55□□□□□ -1.2
CDC42-203ENST00000400259 M0QZ58 72 aa7.52□□□□□ -1.21
CDC42-203ENST00000400259 KRTAP15-1Q3LI76 137 aa7.52□□□□□ -1.21
CDC42-203ENST00000400259 KRTAP12-2P59991 146 aa7.43□□□□□ -1.22
CDC42-203ENST00000400259 KRTAP12-1P59990 96 aa7.4□□□□□ -1.22
CDC42-203ENST00000400259 PCLOQ9Y6V0 5065 aa7.39□□□□□ -1.23
CDC42-203ENST00000400259 MUC2Q02817 5179 aa7.38□□□□□ -1.23
CDC42-203ENST00000400259 R4GN34 69 aa7.34□□□□□ -1.24
CDC42-203ENST00000400259 HMCN2Q8NDA2 5059 aa7.32□□□□□ -1.24
CDC42-203ENST00000400259 HERC1Q15751 4861 aa7.3□□□□□ -1.24
CDC42-203ENST00000400259 LORP23490 312 aaPredicted RBP7.29□□□□□ -1.24
CDC42-203ENST00000400259 FLGP20930 4061 aaPredicted RBP7.28□□□□□ -1.24
CDC42-203ENST00000400259 C10orf95Q9H7T3 257 aa7.26□□□□□ -1.25
CDC42-203ENST00000400259 LUZP6Q538Z0 58 aa7.25□□□□□ -1.25
CDC42-203ENST00000400259 LCE2CQ5TA81 110 aa7.18□□□□□ -1.26
CDC42-203ENST00000400259 FAT4Q6V0I7 4981 aa7.01□□□□□ -1.29
CDC42-203ENST00000400259 MT1HP80294 61 aa6.99□□□□□ -1.29
CDC42-203ENST00000400259 RNF213Q63HN8 5207 aa6.97□□□□□ -1.29
CDC42-203ENST00000400259 UBR4Q5T4S7 5183 aa6.92□□□□□ -1.3
CDC42-203ENST00000400259 M0R2T5 61 aa6.92□□□□□ -1.3
CDC42-203ENST00000400259 CAMK2N1Q7Z7J9 78 aa6.91□□□□□ -1.3
CDC42-203ENST00000400259 SPRR2GQ9BYE4 73 aa6.9□□□□□ -1.3
CDC42-203ENST00000400259 KRTAP19-1Q8IUB9 90 aa6.84□□□□□ -1.31
CDC42-203ENST00000400259 PLAC4Q8WY50 150 aa6.83□□□□□ -1.32
CDC42-203ENST00000400259 MT2AP02795 61 aa6.82□□□□□ -1.32
CDC42-203ENST00000400259 KRTAP9-8Q9BYQ0 159 aa6.81□□□□□ -1.32
CDC42-203ENST00000400259 MT1FP04733 61 aa6.79□□□□□ -1.32
CDC42-203ENST00000400259 KRTAP10-10P60014 251 aa6.75□□□□□ -1.33
CDC42-203ENST00000400259 PP632Q6XCG6 107 aa6.72□□□□□ -1.33
CDC42-203ENST00000400259 TNP1P09430 55 aa6.66□□□□□ -1.34
CDC42-203ENST00000400259 KRTAP19-8Q3LI54 63 aa6.66□□□□□ -1.34
CDC42-203ENST00000400259 KRTAP23-1A1A580 65 aa6.63□□□□□ -1.35
CDC42-203ENST00000400259 KRTAP9-3Q9BYQ3 159 aa6.55□□□□□ -1.36
CDC42-203ENST00000400259 MT1BP07438 61 aa6.53□□□□□ -1.36
CDC42-203ENST00000400259 LCE2AQ5TA79 106 aaPredicted RBP6.43□□□□□ -1.38
CDC42-203ENST00000400259 KRTAP10-5P60370 271 aa6.42□□□□□ -1.38
CDC42-203ENST00000400259 MT1XP80297 61 aa6.42□□□□□ -1.38
CDC42-203ENST00000400259 PRO2289Q9P1D8 64 aa6.4□□□□□ -1.38
CDC42-203ENST00000400259 LCE3AQ5TA76 89 aa6.32□□□□□ -1.4
CDC42-203ENST00000400259 SPRR5A0A1B0GTR4 108 aa6.3□□□□□ -1.4
CDC42-203ENST00000400259 LCE2BO14633 110 aa6.29□□□□□ -1.4
CDC42-203ENST00000400259 KRTAP8-1Q8IUC2 63 aa6.24□□□□□ -1.41
CDC42-203ENST00000400259 KRTAP10-12P60413 245 aa6.2□□□□□ -1.42
CDC42-203ENST00000400259 INE1O15225 51 aa6.19□□□□□ -1.42
CDC42-203ENST00000400259 KRTAP10-7P60409 375 aaPredicted RBP6.18□□□□□ -1.42
CDC42-203ENST00000400259 USH2AO75445 5202 aa6.09□□□□□ -1.43
CDC42-203ENST00000400259 KRTAP12-3P60328 96 aa6.06□□□□□ -1.44
CDC42-203ENST00000400259 KMT2DO14686 5537 aa5.94□□□□□ -1.46
CDC42-203ENST00000400259 KRTAP19-5Q3LI72 72 aa5.88□□□□□ -1.47
CDC42-203ENST00000400259 KRTAP4-8A0A0G2JLE6 195 aa5.82□□□□□ -1.48
CDC42-203ENST00000400259 KRTAP4-8Q9BYQ9 185 aa5.82□□□□□ -1.48
CDC42-203ENST00000400259 KRTAP19-6Q3LI70 58 aa5.8□□□□□ -1.48
CDC42-203ENST00000400259 SSPOA2VEC9 5147 aa5.79□□□□□ -1.48
CDC42-203ENST00000400259 LOC100996750A0A140TA64 210 aa5.76□□□□□ -1.49
CDC42-203ENST00000400259 KRTAP4-6Q9BYQ5 205 aa5.76□□□□□ -1.49
CDC42-203ENST00000400259 KRTAP19-7Q3SYF9 63 aa5.73□□□□□ -1.49
CDC42-203ENST00000400259 LCE3CQ5T5A8 94 aa5.69□□□□□ -1.5
CDC42-203ENST00000400259 KRTAP9-6A0A140TA67 174 aa5.65□□□□□ -1.51
CDC42-203ENST00000400259 KRTAP19-4Q3LI73 84 aa5.63□□□□□ -1.51
CDC42-203ENST00000400259 MT1EP04732 61 aa5.59□□□□□ -1.51
CDC42-203ENST00000400259 FSIP2Q5CZC0 6907 aa5.55□□□□□ -1.52
CDC42-203ENST00000400259 MT1LQ93083 61 aa5.54□□□□□ -1.52
CDC42-203ENST00000400259 KRTAP4-7Q9BYR0 210 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms