RNA–Protein interactions for RNA: ENST00000399697.7

POLR1D-203, Transcript of RNA polymerase I and III subunit D, humanhuman

TSL 1 (best) BASIC

Gene POLR1D, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1D-203ENST00000399697 CSAG1Q6PB30 78 aa9.37□□□□□ -0.91
POLR1D-203ENST00000399697 KRTAP3-3Q9BYR6 98 aa9.36□□□□□ -0.91
POLR1D-203ENST00000399697 ACYP2P14621 99 aa9.35□□□□□ -0.91
POLR1D-203ENST00000399697 H7BZZ5 65 aa9.34□□□□□ -0.91
POLR1D-203ENST00000399697 KRTAP9-8Q9BYQ0 159 aa9.34□□□□□ -0.91
POLR1D-203ENST00000399697 MT2AP02795 61 aa9.27□□□□□ -0.93
POLR1D-203ENST00000399697 MT1FP04733 61 aa9.21□□□□□ -0.93
POLR1D-203ENST00000399697 CHKB-CPT1BH3BT56 60 aa9.21□□□□□ -0.94
POLR1D-203ENST00000399697 KRTAP10-10P60014 251 aa9.21□□□□□ -0.94
POLR1D-203ENST00000399697 COA5Q86WW8 74 aa9.12□□□□□ -0.95
POLR1D-203ENST00000399697 SPTSSBQ8NFR3 76 aa9.12□□□□□ -0.95
POLR1D-203ENST00000399697 LCE2DQ5TA82 110 aaPredicted RBP9.06□□□□□ -0.96
POLR1D-203ENST00000399697 H0YAA0 97 aa9.05□□□□□ -0.96
POLR1D-203ENST00000399697 ATP5EP56381 51 aaPredicted RBP9.05□□□□□ -0.96
POLR1D-203ENST00000399697 TMEM258P61165 79 aa9.05□□□□□ -0.96
POLR1D-203ENST00000399697 PCP4P48539 62 aa9.03□□□□□ -0.96
POLR1D-203ENST00000399697 ADM2Q7Z4H4 148 aa9.03□□□□□ -0.96
POLR1D-203ENST00000399697 KRTAP9-2Q9BYQ4 174 aa9.03□□□□□ -0.96
POLR1D-203ENST00000399697 KRTAP9-3Q9BYQ3 159 aa9.02□□□□□ -0.97
POLR1D-203ENST00000399697 P0C880 135 aa8.9□□□□□ -0.99
POLR1D-203ENST00000399697 KRTAP3-2Q9BYR7 98 aa8.89□□□□□ -0.99
POLR1D-203ENST00000399697 LCE2BO14633 110 aa8.87□□□□□ -0.99
POLR1D-203ENST00000399697 CRIPTQ9P021 101 aa8.87□□□□□ -0.99
POLR1D-203ENST00000399697 FSIP2Q5CZC0 6907 aa8.86□□□□□ -0.99
POLR1D-203ENST00000399697 KRTAP19-1Q8IUB9 90 aa8.84□□□□□ -0.99
POLR1D-203ENST00000399697 SPRR2GQ9BYE4 73 aa8.81□□□□□ -1
POLR1D-203ENST00000399697 USH2AO75445 5202 aa8.8□□□□□ -1
POLR1D-203ENST00000399697 SEC61GP60059 68 aa8.76□□□□□ -1.01
POLR1D-203ENST00000399697 R4GN34 69 aa8.76□□□□□ -1.01
POLR1D-203ENST00000399697 SERP1Q9Y6X1 66 aa8.76□□□□□ -1.01
POLR1D-203ENST00000399697 M0QZ58 72 aa8.72□□□□□ -1.01
POLR1D-203ENST00000399697 A0A1B0GU69 56 aa8.66□□□□□ -1.02
POLR1D-203ENST00000399697 KRTAP19-8Q3LI54 63 aa8.65□□□□□ -1.02
POLR1D-203ENST00000399697 Q5VV11 94 aa8.63□□□□□ -1.03
POLR1D-203ENST00000399697 CRCT1Q9UGL9 99 aa8.63□□□□□ -1.03
POLR1D-203ENST00000399697 SSPOA2VEC9 5147 aa8.62□□□□□ -1.03
POLR1D-203ENST00000399697 LINC01554Q52M75 96 aa8.59□□□□□ -1.03
POLR1D-203ENST00000399697 MT1BP07438 61 aa8.59□□□□□ -1.03
POLR1D-203ENST00000399697 LINC01558Q9Y6Z2 57 aa8.58□□□□□ -1.04
POLR1D-203ENST00000399697 A0A1B0GU33 70 aa8.55□□□□□ -1.04
POLR1D-203ENST00000399697 PRR15LQ9BU68 103 aa8.55□□□□□ -1.04
POLR1D-203ENST00000399697 KRTAP13-4Q3LI77 160 aa8.54□□□□□ -1.04
POLR1D-203ENST00000399697 KRTAP9-6A0A140TA67 174 aa8.53□□□□□ -1.04
POLR1D-203ENST00000399697 RPS28P62857 69 aaKnown RBP8.49□□□□□ -1.05
POLR1D-203ENST00000399697 SPATA8Q6RVD6 105 aa8.46□□□□□ -1.05
POLR1D-203ENST00000399697 SMIM26A0A096LP01 95 aa8.46□□□□□ -1.06
POLR1D-203ENST00000399697 KRTAP19-6Q3LI70 58 aa8.44□□□□□ -1.06
POLR1D-203ENST00000399697 PLAC4Q8WY50 150 aa8.44□□□□□ -1.06
POLR1D-203ENST00000399697 V9GYY9 64 aa8.44□□□□□ -1.06
POLR1D-203ENST00000399697 Q1T7F1 81 aa8.42□□□□□ -1.06
POLR1D-203ENST00000399697 A0A0D9SG42 100 aa8.37□□□□□ -1.07
POLR1D-203ENST00000399697 PSPHP1O15172 72 aa8.35□□□□□ -1.07
POLR1D-203ENST00000399697 A6NN06 94 aa8.34□□□□□ -1.07
POLR1D-203ENST00000399697 FCGBPQ9Y6R7 5405 aaPredicted RBP8.33□□□□□ -1.08
POLR1D-203ENST00000399697 UQCR11O14957 56 aa8.29□□□□□ -1.08
POLR1D-203ENST00000399697 KRTAP10-5P60370 271 aa8.27□□□□□ -1.09
POLR1D-203ENST00000399697 A8MU10 97 aa8.26□□□□□ -1.09
POLR1D-203ENST00000399697 SPINT4Q6UDR6 99 aa8.22□□□□□ -1.09
POLR1D-203ENST00000399697 PRO2289Q9P1D8 64 aa8.2□□□□□ -1.1
POLR1D-203ENST00000399697 MT1XP80297 61 aa8.2□□□□□ -1.1
POLR1D-203ENST00000399697 KRTAP12-1P59990 96 aa8.18□□□□□ -1.1
POLR1D-203ENST00000399697 MIR22HGQ0VDD5 57 aa8.15□□□□□ -1.1
POLR1D-203ENST00000399697 CAMK2N1Q7Z7J9 78 aa8.15□□□□□ -1.1
POLR1D-203ENST00000399697 KRTAP12-2P59991 146 aa8.14□□□□□ -1.11
POLR1D-203ENST00000399697 A6NED7 52 aa8.09□□□□□ -1.11
POLR1D-203ENST00000399697 MACF1Q9UPN3 7388 aaKnown RBP8.02□□□□□ -1.13
POLR1D-203ENST00000399697 KRTAP9-1A8MXZ3 250 aaPredicted RBP8□□□□□ -1.13
POLR1D-203ENST00000399697 K7ERS5 55 aa7.89□□□□□ -1.15
POLR1D-203ENST00000399697 KRTAP10-7P60409 375 aaPredicted RBP7.85□□□□□ -1.15
POLR1D-203ENST00000399697 SYNE2Q8WXH0 6885 aaKnown RBP7.84□□□□□ -1.15
POLR1D-203ENST00000399697 CDC42SE1Q9NRR8 79 aa7.83□□□□□ -1.16
POLR1D-203ENST00000399697 KMT2DO14686 5537 aa7.81□□□□□ -1.16
POLR1D-203ENST00000399697 KRTAP10-12P60413 245 aa7.78□□□□□ -1.16
POLR1D-203ENST00000399697 C10orf95Q9H7T3 257 aa7.77□□□□□ -1.17
POLR1D-203ENST00000399697 KRTAP9-7A8MTY7 169 aa7.74□□□□□ -1.17
POLR1D-203ENST00000399697 KRTAP4-8A0A0G2JLE6 195 aa7.69□□□□□ -1.18
POLR1D-203ENST00000399697 KRTAP4-8Q9BYQ9 185 aa7.69□□□□□ -1.18
POLR1D-203ENST00000399697 TNP1P09430 55 aa7.64□□□□□ -1.19
POLR1D-203ENST00000399697 KRTAP6-3Q3LI67 103 aa7.64□□□□□ -1.19
POLR1D-203ENST00000399697 KRTAP8-1Q8IUC2 63 aa7.64□□□□□ -1.19
POLR1D-203ENST00000399697 BRK1Q8WUW1 75 aa7.61□□□□□ -1.19
POLR1D-203ENST00000399697 KRTAP5-9P26371 169 aa7.53□□□□□ -1.2
POLR1D-203ENST00000399697 SPRR2FQ96RM1 72 aa7.49□□□□□ -1.21
POLR1D-203ENST00000399697 KRTAP25-1Q3LHN0 102 aa7.47□□□□□ -1.21
POLR1D-203ENST00000399697 MUC12Q9UKN1 5478 aa7.46□□□□□ -1.22
POLR1D-203ENST00000399697 ROMO1P60602 79 aa7.45□□□□□ -1.22
POLR1D-203ENST00000399697 LCE3AQ5TA76 89 aa7.42□□□□□ -1.22
POLR1D-203ENST00000399697 MDN1Q9NU22 5596 aa7.32□□□□□ -1.24
POLR1D-203ENST00000399697 KRTAP19-7Q3SYF9 63 aa7.32□□□□□ -1.24
POLR1D-203ENST00000399697 KRTAP19-5Q3LI72 72 aa7.3□□□□□ -1.24
POLR1D-203ENST00000399697 SPRR2EP22531 72 aa7.23□□□□□ -1.25
POLR1D-203ENST00000399697 SPRR2BP35325 72 aa7.23□□□□□ -1.25
POLR1D-203ENST00000399697 SPRR2AP35326 72 aa7.23□□□□□ -1.25
POLR1D-203ENST00000399697 MT1EP04732 61 aa7.22□□□□□ -1.25
POLR1D-203ENST00000399697 NEBP20929 6669 aa7.2□□□□□ -1.26
POLR1D-203ENST00000399697 LCE1AQ5T7P2 110 aa7.2□□□□□ -1.26
POLR1D-203ENST00000399697 KRTAP23-1A1A580 65 aa7.2□□□□□ -1.26
POLR1D-203ENST00000399697 PMAIP1Q13794 54 aa7.18□□□□□ -1.26
POLR1D-203ENST00000399697 KRTAP12-3P60328 96 aa7.13□□□□□ -1.27
POLR1D-203ENST00000399697 PRO0628Q9UI54 55 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms