RNA–Protein interactions for RNA: ENST00000399562.8

C22orf39-202, Transcript of chromosome 22 open reading frame 39, humanhuman

TSL 1 (best) BASIC

Gene C22orf39, Length 3,350 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C22orf39-202ENST00000399562 VPS13BQ7Z7G8 4022 aa6.32□□□□□ -1.4
C22orf39-202ENST00000399562 S4R3F8 94 aa6.31□□□□□ -1.4
C22orf39-202ENST00000399562 PKHD1P08F94 4074 aa6.29□□□□□ -1.4
C22orf39-202ENST00000399562 KRTAP13-4Q3LI77 160 aa6.29□□□□□ -1.4
C22orf39-202ENST00000399562 R4GN34 69 aa6.26□□□□□ -1.41
C22orf39-202ENST00000399562 FAT1Q14517 4588 aa6.25□□□□□ -1.41
C22orf39-202ENST00000399562 KRTAP1-4P0C5Y4 121 aa6.23□□□□□ -1.41
C22orf39-202ENST00000399562 KRTAP12-2P59991 146 aa6.22□□□□□ -1.41
C22orf39-202ENST00000399562 KRTAP10-8P60410 259 aa6.21□□□□□ -1.41
C22orf39-202ENST00000399562 A0A1B0GVY2 172 aa6.17□□□□□ -1.42
C22orf39-202ENST00000399562 KMT2CQ8NEZ4 4911 aaKnown RBP6.16□□□□□ -1.42
C22orf39-202ENST00000399562 SACSQ9NZJ4 4579 aa6.14□□□□□ -1.43
C22orf39-202ENST00000399562 PRO2289Q9P1D8 64 aa6.14□□□□□ -1.43
C22orf39-202ENST00000399562 PKD1P98161 4303 aa6.13□□□□□ -1.43
C22orf39-202ENST00000399562 DYNC1H1Q14204 4646 aaKnown RBP6.12□□□□□ -1.43
C22orf39-202ENST00000399562 KRTAP3-1Q9BYR8 98 aa6.12□□□□□ -1.43
C22orf39-202ENST00000399562 MYCBP2O75592 4640 aa6.11□□□□□ -1.43
C22orf39-202ENST00000399562 XP32Q5T750 250 aa6.1□□□□□ -1.43
C22orf39-202ENST00000399562 KRTAP3-2Q9BYR7 98 aa6.04□□□□□ -1.44
C22orf39-202ENST00000399562 KRTAP10-6P60371 365 aaPredicted RBP6.04□□□□□ -1.44
C22orf39-202ENST00000399562 KIAA1109Q2LD37 5005 aa6.03□□□□□ -1.44
C22orf39-202ENST00000399562 LRP1Q07954 4544 aaKnown RBP6.02□□□□□ -1.45
C22orf39-202ENST00000399562 KRTAP12-1P59990 96 aa5.99□□□□□ -1.45
C22orf39-202ENST00000399562 RYR2Q92736 4967 aa5.99□□□□□ -1.45
C22orf39-202ENST00000399562 RYR3Q15413 4870 aa5.97□□□□□ -1.45
C22orf39-202ENST00000399562 KRTAP10-4P60372 401 aaPredicted RBP5.97□□□□□ -1.45
C22orf39-202ENST00000399562 APOBP04114 4563 aaKnown RBP5.95□□□□□ -1.46
C22orf39-202ENST00000399562 KRTAP4-5Q9BYR2 181 aa5.93□□□□□ -1.46
C22orf39-202ENST00000399562 FAT3Q8TDW7 4589 aa5.9□□□□□ -1.46
C22orf39-202ENST00000399562 RPS29P62273 56 aaKnown RBP5.9□□□□□ -1.46
C22orf39-202ENST00000399562 RYR1P21817 5038 aa5.86□□□□□ -1.47
C22orf39-202ENST00000399562 HSPG2P98160 4391 aa5.85□□□□□ -1.47
C22orf39-202ENST00000399562 KRTAP17-1Q9BYP8 105 aa5.84□□□□□ -1.47
C22orf39-202ENST00000399562 EPPK1P58107 5090 aaKnown RBP5.81□□□□□ -1.48
C22orf39-202ENST00000399562 PKHD1L1Q86WI1 4243 aa5.8□□□□□ -1.48
C22orf39-202ENST00000399562 LPAP08519 4548 aa5.77□□□□□ -1.49
C22orf39-202ENST00000399562 MT1HL1P0DM35 61 aa5.73□□□□□ -1.49
C22orf39-202ENST00000399562 KRTAP3-3Q9BYR6 98 aa5.72□□□□□ -1.49
C22orf39-202ENST00000399562 KRTAP23-1A1A580 65 aa5.71□□□□□ -1.5
C22orf39-202ENST00000399562 LRP2P98164 4655 aa5.7□□□□□ -1.5
C22orf39-202ENST00000399562 M0QZ58 72 aa5.69□□□□□ -1.5
C22orf39-202ENST00000399562 INE1O15225 51 aa5.69□□□□□ -1.5
C22orf39-202ENST00000399562 TNXBP22105 4242 aa5.63□□□□□ -1.51
C22orf39-202ENST00000399562 HERC2O95714 4834 aa5.59□□□□□ -1.52
C22orf39-202ENST00000399562 M0R2T5 61 aa5.57□□□□□ -1.52
C22orf39-202ENST00000399562 ABCA13Q86UQ4 5058 aa5.56□□□□□ -1.52
C22orf39-202ENST00000399562 PP632Q6XCG6 107 aa5.55□□□□□ -1.52
C22orf39-202ENST00000399562 BIRC6Q9NR09 4857 aa5.52□□□□□ -1.53
C22orf39-202ENST00000399562 MUC2Q02817 5179 aa5.47□□□□□ -1.53
C22orf39-202ENST00000399562 HERC1Q15751 4861 aa5.35□□□□□ -1.55
C22orf39-202ENST00000399562 PCLOQ9Y6V0 5065 aa5.33□□□□□ -1.56
C22orf39-202ENST00000399562 SPRR5A0A1B0GTR4 108 aa5.31□□□□□ -1.56
C22orf39-202ENST00000399562 KRTAP4-1Q9BYQ7 146 aa5.3□□□□□ -1.56
C22orf39-202ENST00000399562 LORP23490 312 aaPredicted RBP5.28□□□□□ -1.56
C22orf39-202ENST00000399562 TNP1P09430 55 aa5.24□□□□□ -1.57
C22orf39-202ENST00000399562 RNF213Q63HN8 5207 aa5.23□□□□□ -1.57
C22orf39-202ENST00000399562 FAT4Q6V0I7 4981 aa5.19□□□□□ -1.58
C22orf39-202ENST00000399562 UBR4Q5T4S7 5183 aa5.13□□□□□ -1.59
C22orf39-202ENST00000399562 KRTAP10-10P60014 251 aa5.11□□□□□ -1.59
C22orf39-202ENST00000399562 MUC17Q685J3 4493 aa5.11□□□□□ -1.59
C22orf39-202ENST00000399562 LCE2DQ5TA82 110 aaPredicted RBP5.06□□□□□ -1.6
C22orf39-202ENST00000399562 HMCN2Q8NDA2 5059 aa5.02□□□□□ -1.61
C22orf39-202ENST00000399562 KRTAP19-2Q3LHN2 52 aa4.93□□□□□ -1.62
C22orf39-202ENST00000399562 FLGP20930 4061 aaPredicted RBP4.86□□□□□ -1.63
C22orf39-202ENST00000399562 FSIP2Q5CZC0 6907 aa4.86□□□□□ -1.63
C22orf39-202ENST00000399562 MT1HP80294 61 aa4.86□□□□□ -1.63
C22orf39-202ENST00000399562 LCE2CQ5TA81 110 aa4.84□□□□□ -1.63
C22orf39-202ENST00000399562 LCE3AQ5TA76 89 aa4.82□□□□□ -1.64
C22orf39-202ENST00000399562 MT2AP02795 61 aa4.72□□□□□ -1.65
C22orf39-202ENST00000399562 MT1FP04733 61 aa4.72□□□□□ -1.65
C22orf39-202ENST00000399562 LCE2AQ5TA79 106 aaPredicted RBP4.69□□□□□ -1.66
C22orf39-202ENST00000399562 LCE2BO14633 110 aa4.64□□□□□ -1.67
C22orf39-202ENST00000399562 KRTAP19-1Q8IUB9 90 aa4.64□□□□□ -1.67
C22orf39-202ENST00000399562 USH2AO75445 5202 aa4.63□□□□□ -1.67
C22orf39-202ENST00000399562 KRTAP9-8Q9BYQ0 159 aa4.62□□□□□ -1.67
C22orf39-202ENST00000399562 SPRR2GQ9BYE4 73 aa4.59□□□□□ -1.67
C22orf39-202ENST00000399562 KMT2DO14686 5537 aa4.56□□□□□ -1.68
C22orf39-202ENST00000399562 KRTAP12-3P60328 96 aa4.5□□□□□ -1.69
C22orf39-202ENST00000399562 KRTAP10-12P60413 245 aa4.47□□□□□ -1.69
C22orf39-202ENST00000399562 KRTAP9-3Q9BYQ3 159 aa4.43□□□□□ -1.7
C22orf39-202ENST00000399562 MT1BP07438 61 aa4.43□□□□□ -1.7
C22orf39-202ENST00000399562 KRTAP19-8Q3LI54 63 aa4.39□□□□□ -1.71
C22orf39-202ENST00000399562 KRTAP8-1Q8IUC2 63 aa4.38□□□□□ -1.71
C22orf39-202ENST00000399562 KRTAP10-7P60409 375 aaPredicted RBP4.34□□□□□ -1.71
C22orf39-202ENST00000399562 MT1XP80297 61 aa4.34□□□□□ -1.71
C22orf39-202ENST00000399562 KRTAP10-5P60370 271 aa4.33□□□□□ -1.72
C22orf39-202ENST00000399562 KRTAP12-4P60329 112 aa4.28□□□□□ -1.72
C22orf39-202ENST00000399562 LCE1AQ5T7P2 110 aa4.27□□□□□ -1.73
C22orf39-202ENST00000399562 LCE1EQ5T753 118 aa4.24□□□□□ -1.73
C22orf39-202ENST00000399562 KRTAP4-8A0A0G2JLE6 195 aa4.21□□□□□ -1.74
C22orf39-202ENST00000399562 KRTAP4-8Q9BYQ9 185 aa4.21□□□□□ -1.74
C22orf39-202ENST00000399562 KRTAP2-2Q9BYT5 123 aa4.19□□□□□ -1.74
C22orf39-202ENST00000399562 LCE3CQ5T5A8 94 aa4.18□□□□□ -1.74
C22orf39-202ENST00000399562 OBSCNQ5VST9 7968 aa4.18□□□□□ -1.74
C22orf39-202ENST00000399562 KRTAP9-6A8MVA2 160 aa4.16□□□□□ -1.74
C22orf39-202ENST00000399562 KRTAP19-5Q3LI72 72 aa4.15□□□□□ -1.75
C22orf39-202ENST00000399562 KRTAP2-3P0C7H8 128 aa4.13□□□□□ -1.75
C22orf39-202ENST00000399562 KRTAP2-4Q9BYR9 128 aa4.13□□□□□ -1.75
C22orf39-202ENST00000399562 KRTAP2-1Q9BYU5 128 aa4.13□□□□□ -1.75
C22orf39-202ENST00000399562 KRTAP6-3Q3LI67 103 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 338 ms