RNA–Protein interactions for RNA: ENST00000399434.2

TNRC18-202, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2 BASIC

Gene TNRC18, Length 1,459 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-202ENST00000399434 LCE2AQ5TA79 106 aaPredicted RBP7.91□□□□□ -1.14
TNRC18-202ENST00000399434 LCA10Q71F78 164 aa7.91□□□□□ -1.14
TNRC18-202ENST00000399434 KRTAP3-3Q9BYR6 98 aa7.91□□□□□ -1.14
TNRC18-202ENST00000399434 S4R3F8 94 aa7.91□□□□□ -1.14
TNRC18-202ENST00000399434 COA5Q86WW8 74 aa7.9□□□□□ -1.14
TNRC18-202ENST00000399434 CHKB-CPT1BH3BT56 60 aa7.79□□□□□ -1.16
TNRC18-202ENST00000399434 SERP1Q9Y6X1 66 aa7.77□□□□□ -1.17
TNRC18-202ENST00000399434 CSAG1Q6PB30 78 aa7.73□□□□□ -1.17
TNRC18-202ENST00000399434 M0R2T5 61 aa7.71□□□□□ -1.18
TNRC18-202ENST00000399434 KRTAP10-6P60371 365 aaPredicted RBP7.67□□□□□ -1.18
TNRC18-202ENST00000399434 SPTSSBQ8NFR3 76 aa7.67□□□□□ -1.18
TNRC18-202ENST00000399434 LORP23490 312 aaPredicted RBP7.64□□□□□ -1.19
TNRC18-202ENST00000399434 KRTAP9-2Q9BYQ4 174 aa7.63□□□□□ -1.19
TNRC18-202ENST00000399434 RPS28P62857 69 aaKnown RBP7.62□□□□□ -1.19
TNRC18-202ENST00000399434 KRTAP9-8Q9BYQ0 159 aa7.61□□□□□ -1.19
TNRC18-202ENST00000399434 H0YAA0 97 aa7.57□□□□□ -1.2
TNRC18-202ENST00000399434 MT2AP02795 61 aa7.57□□□□□ -1.2
TNRC18-202ENST00000399434 KRTAP3-2Q9BYR7 98 aa7.57□□□□□ -1.2
TNRC18-202ENST00000399434 MT1FP04733 61 aa7.54□□□□□ -1.2
TNRC18-202ENST00000399434 ADM2Q7Z4H4 148 aa7.54□□□□□ -1.2
TNRC18-202ENST00000399434 SMIM26A0A096LP01 95 aa7.52□□□□□ -1.21
TNRC18-202ENST00000399434 P0C880 135 aa7.51□□□□□ -1.21
TNRC18-202ENST00000399434 KRTAP9-6A0A140TA67 174 aa7.5□□□□□ -1.21
TNRC18-202ENST00000399434 LINC01558Q9Y6Z2 57 aa7.5□□□□□ -1.21
TNRC18-202ENST00000399434 Q1T7F1 81 aa7.45□□□□□ -1.22
TNRC18-202ENST00000399434 A0A1B0GU69 56 aa7.42□□□□□ -1.22
TNRC18-202ENST00000399434 KRTAP10-10P60014 251 aa7.42□□□□□ -1.22
TNRC18-202ENST00000399434 SEC61GP60059 68 aa7.38□□□□□ -1.23
TNRC18-202ENST00000399434 PRR15LQ9BU68 103 aa7.38□□□□□ -1.23
TNRC18-202ENST00000399434 V9GYY9 64 aa7.38□□□□□ -1.23
TNRC18-202ENST00000399434 LCE2DQ5TA82 110 aaPredicted RBP7.35□□□□□ -1.23
TNRC18-202ENST00000399434 KRTAP9-3Q9BYQ3 159 aa7.35□□□□□ -1.23
TNRC18-202ENST00000399434 PSPHP1O15172 72 aa7.34□□□□□ -1.23
TNRC18-202ENST00000399434 KRTAP13-4Q3LI77 160 aa7.32□□□□□ -1.24
TNRC18-202ENST00000399434 Q5VV11 94 aa7.31□□□□□ -1.24
TNRC18-202ENST00000399434 KRTAP19-1Q8IUB9 90 aa7.3□□□□□ -1.24
TNRC18-202ENST00000399434 CRIPTQ9P021 101 aa7.29□□□□□ -1.24
TNRC18-202ENST00000399434 A0A1B0GU33 70 aa7.28□□□□□ -1.24
TNRC18-202ENST00000399434 SPRR2GQ9BYE4 73 aa7.27□□□□□ -1.25
TNRC18-202ENST00000399434 M0QZ58 72 aa7.25□□□□□ -1.25
TNRC18-202ENST00000399434 R4GN34 69 aa7.24□□□□□ -1.25
TNRC18-202ENST00000399434 SPATA8Q6RVD6 105 aa7.21□□□□□ -1.26
TNRC18-202ENST00000399434 LCE2BO14633 110 aa7.19□□□□□ -1.26
TNRC18-202ENST00000399434 UQCR11O14957 56 aa7.14□□□□□ -1.27
TNRC18-202ENST00000399434 KRTAP19-8Q3LI54 63 aa7.14□□□□□ -1.27
TNRC18-202ENST00000399434 LINC01554Q52M75 96 aa7.11□□□□□ -1.27
TNRC18-202ENST00000399434 CRCT1Q9UGL9 99 aa7.11□□□□□ -1.27
TNRC18-202ENST00000399434 A8MU10 97 aa7.11□□□□□ -1.27
TNRC18-202ENST00000399434 MT1BP07438 61 aa7.09□□□□□ -1.27
TNRC18-202ENST00000399434 A0A0D9SG42 100 aa7.08□□□□□ -1.28
TNRC18-202ENST00000399434 A6NED7 52 aa7.08□□□□□ -1.28
TNRC18-202ENST00000399434 MIR22HGQ0VDD5 57 aa7.06□□□□□ -1.28
TNRC18-202ENST00000399434 USH2AO75445 5202 aa7.06□□□□□ -1.28
TNRC18-202ENST00000399434 FSIP2Q5CZC0 6907 aa7.06□□□□□ -1.28
TNRC18-202ENST00000399434 A6NN06 94 aa7□□□□□ -1.29
TNRC18-202ENST00000399434 H3BS24 57 aa6.99□□□□□ -1.29
TNRC18-202ENST00000399434 KRTAP12-1P59990 96 aa6.98□□□□□ -1.29
TNRC18-202ENST00000399434 KRTAP12-2P59991 146 aa6.96□□□□□ -1.3
TNRC18-202ENST00000399434 CDC42SE1Q9NRR8 79 aa6.95□□□□□ -1.3
TNRC18-202ENST00000399434 SSPOA2VEC9 5147 aa6.94□□□□□ -1.3
TNRC18-202ENST00000399434 SPINT4Q6UDR6 99 aa6.89□□□□□ -1.31
TNRC18-202ENST00000399434 PLAC4Q8WY50 150 aa6.87□□□□□ -1.31
TNRC18-202ENST00000399434 BRK1Q8WUW1 75 aa6.83□□□□□ -1.32
TNRC18-202ENST00000399434 MT1XP80297 61 aa6.79□□□□□ -1.32
TNRC18-202ENST00000399434 KRTAP19-6Q3LI70 58 aa6.79□□□□□ -1.32
TNRC18-202ENST00000399434 KRTAP10-5P60370 271 aa6.77□□□□□ -1.33
TNRC18-202ENST00000399434 CAMK2N1Q7Z7J9 78 aa6.74□□□□□ -1.33
TNRC18-202ENST00000399434 KRTAP9-7A8MTY7 169 aa6.71□□□□□ -1.34
TNRC18-202ENST00000399434 K7ERS5 55 aa6.7□□□□□ -1.34
TNRC18-202ENST00000399434 FCGBPQ9Y6R7 5405 aaPredicted RBP6.69□□□□□ -1.34
TNRC18-202ENST00000399434 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.66□□□□□ -1.34
TNRC18-202ENST00000399434 C10orf95Q9H7T3 257 aa6.64□□□□□ -1.35
TNRC18-202ENST00000399434 PRO2289Q9P1D8 64 aa6.62□□□□□ -1.35
TNRC18-202ENST00000399434 PRO0628Q9UI54 55 aa6.55□□□□□ -1.36
TNRC18-202ENST00000399434 KRTAP10-7P60409 375 aaPredicted RBP6.51□□□□□ -1.37
TNRC18-202ENST00000399434 A0A0A0MQY5 61 aa6.47□□□□□ -1.37
TNRC18-202ENST00000399434 ROMO1P60602 79 aa6.47□□□□□ -1.37
TNRC18-202ENST00000399434 KRTAP10-12P60413 245 aa6.43□□□□□ -1.38
TNRC18-202ENST00000399434 PMAIP1Q13794 54 aa6.42□□□□□ -1.38
TNRC18-202ENST00000399434 TNP1P09430 55 aa6.38□□□□□ -1.39
TNRC18-202ENST00000399434 MACF1Q9UPN3 7388 aaKnown RBP6.36□□□□□ -1.39
TNRC18-202ENST00000399434 KRTAP25-1Q3LHN0 102 aa6.35□□□□□ -1.39
TNRC18-202ENST00000399434 KRTAP4-8A0A0G2JLE6 195 aa6.31□□□□□ -1.4
TNRC18-202ENST00000399434 KRTAP4-8Q9BYQ9 185 aa6.31□□□□□ -1.4
TNRC18-202ENST00000399434 KMT2DO14686 5537 aa6.26□□□□□ -1.41
TNRC18-202ENST00000399434 LCE3AQ5TA76 89 aa6.24□□□□□ -1.41
TNRC18-202ENST00000399434 SYNE2Q8WXH0 6885 aaKnown RBP6.23□□□□□ -1.41
TNRC18-202ENST00000399434 KRTAP6-3Q3LI67 103 aa6.18□□□□□ -1.42
TNRC18-202ENST00000399434 KRTAP8-1Q8IUC2 63 aa6.14□□□□□ -1.43
TNRC18-202ENST00000399434 PRAC1Q96KF2 57 aa6.14□□□□□ -1.43
TNRC18-202ENST00000399434 KRTAP23-1A1A580 65 aa6.13□□□□□ -1.43
TNRC18-202ENST00000399434 KTN1-AS1Q86SY8 53 aa6.11□□□□□ -1.43
TNRC18-202ENST00000399434 KRTAP5-9P26371 169 aa6.1□□□□□ -1.43
TNRC18-202ENST00000399434 KRTAP19-7Q3SYF9 63 aa6.08□□□□□ -1.44
TNRC18-202ENST00000399434 KRTAP19-5Q3LI72 72 aa6.06□□□□□ -1.44
TNRC18-202ENST00000399434 PP632Q6XCG6 107 aa6.05□□□□□ -1.44
TNRC18-202ENST00000399434 MT1EP04732 61 aa5.97□□□□□ -1.45
TNRC18-202ENST00000399434 SPRR2FQ96RM1 72 aa5.97□□□□□ -1.45
TNRC18-202ENST00000399434 MUC12Q9UKN1 5478 aa5.97□□□□□ -1.45
TNRC18-202ENST00000399434 KRTAP12-3P60328 96 aa5.96□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms