RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 ADM2Q7Z4H4 148 aa11.91□□□□□ -0.5
RABGGTA-202ENST00000399409 EPPK1P58107 5090 aaKnown RBP11.88□□□□□ -0.51
RABGGTA-202ENST00000399409 RYR1P21817 5038 aa11.87□□□□□ -0.51
RABGGTA-202ENST00000399409 MT1HL1P0DM35 61 aa11.85□□□□□ -0.51
RABGGTA-202ENST00000399409 KRTAP17-1Q9BYP8 105 aa11.84□□□□□ -0.51
RABGGTA-202ENST00000399409 KRTAP3-3Q9BYR6 98 aa11.81□□□□□ -0.52
RABGGTA-202ENST00000399409 DMBT1Q9UGM3 2413 aaPredicted RBP11.81□□□□□ -0.52
RABGGTA-202ENST00000399409 S4R3F8 94 aa11.78□□□□□ -0.52
RABGGTA-202ENST00000399409 K7ERS5 55 aa11.7□□□□□ -0.54
RABGGTA-202ENST00000399409 KRTAP10-6P60371 365 aaPredicted RBP11.69□□□□□ -0.54
RABGGTA-202ENST00000399409 KIAA1109Q2LD37 5005 aa11.66□□□□□ -0.54
RABGGTA-202ENST00000399409 CSAG1Q6PB30 78 aa11.66□□□□□ -0.54
RABGGTA-202ENST00000399409 TPRXLQ17RH7 258 aa11.65□□□□□ -0.54
RABGGTA-202ENST00000399409 KRTAP3-2Q9BYR7 98 aa11.63□□□□□ -0.55
RABGGTA-202ENST00000399409 LINC01554Q52M75 96 aa11.6□□□□□ -0.55
RABGGTA-202ENST00000399409 MYCBP2O75592 4640 aa11.53□□□□□ -0.56
RABGGTA-202ENST00000399409 KRTAP13-4Q3LI77 160 aa11.5□□□□□ -0.57
RABGGTA-202ENST00000399409 P0C880 135 aa11.44□□□□□ -0.58
RABGGTA-202ENST00000399409 KRTAP25-1Q3LHN0 102 aa11.43□□□□□ -0.58
RABGGTA-202ENST00000399409 A0A0D9SG42 100 aa11.39□□□□□ -0.59
RABGGTA-202ENST00000399409 ROMO1P60602 79 aa11.37□□□□□ -0.59
RABGGTA-202ENST00000399409 BIRC6Q9NR09 4857 aa11.29□□□□□ -0.6
RABGGTA-202ENST00000399409 KRTAP4-5Q9BYR2 181 aa11.28□□□□□ -0.6
RABGGTA-202ENST00000399409 LRP2P98164 4655 aa11.25□□□□□ -0.61
RABGGTA-202ENST00000399409 SEC61BP60468 96 aaKnown RBP11.24□□□□□ -0.61
RABGGTA-202ENST00000399409 M0QZ58 72 aa11.22□□□□□ -0.61
RABGGTA-202ENST00000399409 LPAP08519 4548 aa11.16□□□□□ -0.62
RABGGTA-202ENST00000399409 ABCA13Q86UQ4 5058 aa11.16□□□□□ -0.62
RABGGTA-202ENST00000399409 CRIPTQ9P021 101 aa11.14□□□□□ -0.63
RABGGTA-202ENST00000399409 KRTAP12-2P59991 146 aa11.14□□□□□ -0.63
RABGGTA-202ENST00000399409 HERC2O95714 4834 aa11.13□□□□□ -0.63
RABGGTA-202ENST00000399409 KRTAP12-1P59990 96 aa11.11□□□□□ -0.63
RABGGTA-202ENST00000399409 J3QL48 77 aa11.06□□□□□ -0.64
RABGGTA-202ENST00000399409 SPINT4Q6UDR6 99 aa11.06□□□□□ -0.64
RABGGTA-202ENST00000399409 PCLOQ9Y6V0 5065 aa10.96□□□□□ -0.65
RABGGTA-202ENST00000399409 KRTAP4-1Q9BYQ7 146 aa10.93□□□□□ -0.66
RABGGTA-202ENST00000399409 R4GN34 69 aa10.9□□□□□ -0.66
RABGGTA-202ENST00000399409 MUC17Q685J3 4493 aa10.89□□□□□ -0.67
RABGGTA-202ENST00000399409 C10orf95Q9H7T3 257 aa10.81□□□□□ -0.68
RABGGTA-202ENST00000399409 KRTAP19-2Q3LHN2 52 aa10.79□□□□□ -0.68
RABGGTA-202ENST00000399409 LORP23490 312 aaPredicted RBP10.69□□□□□ -0.7
RABGGTA-202ENST00000399409 HERC1Q15751 4861 aa10.66□□□□□ -0.7
RABGGTA-202ENST00000399409 FLGP20930 4061 aaPredicted RBP10.4□□□□□ -0.74
RABGGTA-202ENST00000399409 KRTAP15-1Q3LI76 137 aa10.37□□□□□ -0.75
RABGGTA-202ENST00000399409 HMCN2Q8NDA2 5059 aa10.34□□□□□ -0.75
RABGGTA-202ENST00000399409 CAMK2N1Q7Z7J9 78 aa10.33□□□□□ -0.76
RABGGTA-202ENST00000399409 H3BS24 57 aa10.29□□□□□ -0.76
RABGGTA-202ENST00000399409 PP632Q6XCG6 107 aa10.19□□□□□ -0.78
RABGGTA-202ENST00000399409 LCE2CQ5TA81 110 aa10.18□□□□□ -0.78
RABGGTA-202ENST00000399409 MUC2Q02817 5179 aa10.14□□□□□ -0.79
RABGGTA-202ENST00000399409 UBR4Q5T4S7 5183 aa10.07□□□□□ -0.8
RABGGTA-202ENST00000399409 PLAC4Q8WY50 150 aa10.02□□□□□ -0.81
RABGGTA-202ENST00000399409 SPRR2GQ9BYE4 73 aa9.99□□□□□ -0.81
RABGGTA-202ENST00000399409 NDUFAF8A1L188 74 aa9.99□□□□□ -0.81
RABGGTA-202ENST00000399409 TNP1P09430 55 aa9.98□□□□□ -0.81
RABGGTA-202ENST00000399409 RNF213Q63HN8 5207 aa9.97□□□□□ -0.81
RABGGTA-202ENST00000399409 KRTAP23-1A1A580 65 aa9.94□□□□□ -0.82
RABGGTA-202ENST00000399409 M0R2T5 61 aa9.93□□□□□ -0.82
RABGGTA-202ENST00000399409 MT1HP80294 61 aa9.91□□□□□ -0.82
RABGGTA-202ENST00000399409 KRTAP19-1Q8IUB9 90 aa9.88□□□□□ -0.83
RABGGTA-202ENST00000399409 MT2AP02795 61 aa9.74□□□□□ -0.85
RABGGTA-202ENST00000399409 KRTAP10-10P60014 251 aa9.72□□□□□ -0.85
RABGGTA-202ENST00000399409 MT1FP04733 61 aa9.71□□□□□ -0.86
RABGGTA-202ENST00000399409 FAT4Q6V0I7 4981 aa9.7□□□□□ -0.86
RABGGTA-202ENST00000399409 KRTAP9-8Q9BYQ0 159 aa9.67□□□□□ -0.86
RABGGTA-202ENST00000399409 KRTAP19-8Q3LI54 63 aa9.59□□□□□ -0.87
RABGGTA-202ENST00000399409 LUZP6Q538Z0 58 aa9.54□□□□□ -0.88
RABGGTA-202ENST00000399409 SPRR5A0A1B0GTR4 108 aa9.4□□□□□ -0.9
RABGGTA-202ENST00000399409 MT1BP07438 61 aa9.39□□□□□ -0.91
RABGGTA-202ENST00000399409 LCE3AQ5TA76 89 aa9.39□□□□□ -0.91
RABGGTA-202ENST00000399409 KRTAP10-5P60370 271 aa9.3□□□□□ -0.92
RABGGTA-202ENST00000399409 MT1XP80297 61 aa9.29□□□□□ -0.92
RABGGTA-202ENST00000399409 KRTAP9-3Q9BYQ3 159 aa9.29□□□□□ -0.92
RABGGTA-202ENST00000399409 KRTAP8-1Q8IUC2 63 aa9.24□□□□□ -0.93
RABGGTA-202ENST00000399409 KRTAP10-12P60413 245 aa9.11□□□□□ -0.95
RABGGTA-202ENST00000399409 PRO2289Q9P1D8 64 aa9.08□□□□□ -0.96
RABGGTA-202ENST00000399409 KRTAP12-3P60328 96 aa8.99□□□□□ -0.97
RABGGTA-202ENST00000399409 A0A0A0MQY5 61 aa8.98□□□□□ -0.97
RABGGTA-202ENST00000399409 KRTAP10-7P60409 375 aaPredicted RBP8.98□□□□□ -0.97
RABGGTA-202ENST00000399409 LCE2AQ5TA79 106 aaPredicted RBP8.93□□□□□ -0.98
RABGGTA-202ENST00000399409 LCE2BO14633 110 aa8.88□□□□□ -0.99
RABGGTA-202ENST00000399409 KRTAP19-5Q3LI72 72 aa8.62□□□□□ -1.03
RABGGTA-202ENST00000399409 USH2AO75445 5202 aa8.48□□□□□ -1.05
RABGGTA-202ENST00000399409 LCE3CQ5T5A8 94 aa8.47□□□□□ -1.05
RABGGTA-202ENST00000399409 FSIP2Q5CZC0 6907 aa8.41□□□□□ -1.06
RABGGTA-202ENST00000399409 KRTAP4-8A0A0G2JLE6 195 aa8.4□□□□□ -1.07
RABGGTA-202ENST00000399409 KRTAP4-8Q9BYQ9 185 aa8.4□□□□□ -1.07
RABGGTA-202ENST00000399409 KRTAP19-7Q3SYF9 63 aa8.28□□□□□ -1.08
RABGGTA-202ENST00000399409 KRTAP19-4Q3LI73 84 aa8.26□□□□□ -1.09
RABGGTA-202ENST00000399409 INE1O15225 51 aa8.22□□□□□ -1.09
RABGGTA-202ENST00000399409 KMT2DO14686 5537 aa8.15□□□□□ -1.1
RABGGTA-202ENST00000399409 SSPOA2VEC9 5147 aa8.13□□□□□ -1.11
RABGGTA-202ENST00000399409 KRTAP19-6Q3LI70 58 aa8.1□□□□□ -1.11
RABGGTA-202ENST00000399409 MT1EP04732 61 aa8.08□□□□□ -1.12
RABGGTA-202ENST00000399409 LCE2DQ5TA82 110 aaPredicted RBP8.06□□□□□ -1.12
RABGGTA-202ENST00000399409 MT1LQ93083 61 aa8.05□□□□□ -1.12
RABGGTA-202ENST00000399409 KRTAP9-6A8MVA2 160 aa8.05□□□□□ -1.12
RABGGTA-202ENST00000399409 KRTAP9-2Q9BYQ4 174 aa7.99□□□□□ -1.13
RABGGTA-202ENST00000399409 KRTAP4-7Q9BYR0 210 aa7.96□□□□□ -1.14
RABGGTA-202ENST00000399409 KRTAP2-3P0C7H8 128 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms