RNA–Protein interactions for RNA: ENST00000399240.5

RUNX1-205, Transcript of runt related transcription factor 1, humanhuman

TSL 3 BASIC

Gene RUNX1, Length 1,590 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-205ENST00000399240 PCP4P48539 62 aa11.76□□□□□ -0.53
RUNX1-205ENST00000399240 LORP23490 312 aaPredicted RBP11.75□□□□□ -0.53
RUNX1-205ENST00000399240 KRTAP3-3Q9BYR6 98 aa11.75□□□□□ -0.53
RUNX1-205ENST00000399240 ACYP2P14621 99 aa11.67□□□□□ -0.54
RUNX1-205ENST00000399240 CSAG1Q6PB30 78 aa11.62□□□□□ -0.55
RUNX1-205ENST00000399240 KRTAP9-8Q9BYQ0 159 aa11.62□□□□□ -0.55
RUNX1-205ENST00000399240 MT2AP02795 61 aa11.53□□□□□ -0.56
RUNX1-205ENST00000399240 CHKB-CPT1BH3BT56 60 aa11.46□□□□□ -0.57
RUNX1-205ENST00000399240 MT1FP04733 61 aa11.45□□□□□ -0.58
RUNX1-205ENST00000399240 COA5Q86WW8 74 aa11.45□□□□□ -0.58
RUNX1-205ENST00000399240 TMEM258P61165 79 aa11.42□□□□□ -0.58
RUNX1-205ENST00000399240 ATP5EP56381 51 aaPredicted RBP11.39□□□□□ -0.59
RUNX1-205ENST00000399240 KRTAP10-10P60014 251 aa11.38□□□□□ -0.59
RUNX1-205ENST00000399240 SPTSSBQ8NFR3 76 aa11.33□□□□□ -0.6
RUNX1-205ENST00000399240 H0YAA0 97 aa11.3□□□□□ -0.6
RUNX1-205ENST00000399240 ADM2Q7Z4H4 148 aa11.24□□□□□ -0.61
RUNX1-205ENST00000399240 KRTAP9-3Q9BYQ3 159 aa11.23□□□□□ -0.61
RUNX1-205ENST00000399240 LCE2DQ5TA82 110 aaPredicted RBP11.19□□□□□ -0.62
RUNX1-205ENST00000399240 KRTAP3-2Q9BYR7 98 aa11.16□□□□□ -0.62
RUNX1-205ENST00000399240 P0C880 135 aa11.13□□□□□ -0.63
RUNX1-205ENST00000399240 KRTAP9-2Q9BYQ4 174 aa11.1□□□□□ -0.63
RUNX1-205ENST00000399240 SERP1Q9Y6X1 66 aa11.06□□□□□ -0.64
RUNX1-205ENST00000399240 KRTAP19-1Q8IUB9 90 aa11.03□□□□□ -0.64
RUNX1-205ENST00000399240 LCE2BO14633 110 aa11.03□□□□□ -0.64
RUNX1-205ENST00000399240 CRIPTQ9P021 101 aa11.01□□□□□ -0.65
RUNX1-205ENST00000399240 SPRR2GQ9BYE4 73 aa10.98□□□□□ -0.65
RUNX1-205ENST00000399240 SEC61GP60059 68 aa10.89□□□□□ -0.67
RUNX1-205ENST00000399240 USH2AO75445 5202 aa10.88□□□□□ -0.67
RUNX1-205ENST00000399240 R4GN34 69 aa10.88□□□□□ -0.67
RUNX1-205ENST00000399240 M0QZ58 72 aa10.84□□□□□ -0.67
RUNX1-205ENST00000399240 A0A1B0GU69 56 aa10.82□□□□□ -0.68
RUNX1-205ENST00000399240 RPS28P62857 69 aaKnown RBP10.82□□□□□ -0.68
RUNX1-205ENST00000399240 LINC01558Q9Y6Z2 57 aa10.81□□□□□ -0.68
RUNX1-205ENST00000399240 FSIP2Q5CZC0 6907 aa10.79□□□□□ -0.68
RUNX1-205ENST00000399240 KRTAP19-8Q3LI54 63 aa10.78□□□□□ -0.68
RUNX1-205ENST00000399240 KRTAP13-4Q3LI77 160 aa10.73□□□□□ -0.69
RUNX1-205ENST00000399240 MT1BP07438 61 aa10.71□□□□□ -0.69
RUNX1-205ENST00000399240 A0A1B0GU33 70 aa10.69□□□□□ -0.7
RUNX1-205ENST00000399240 Q5VV11 94 aa10.69□□□□□ -0.7
RUNX1-205ENST00000399240 PRR15LQ9BU68 103 aa10.68□□□□□ -0.7
RUNX1-205ENST00000399240 SMIM26A0A096LP01 95 aa10.67□□□□□ -0.7
RUNX1-205ENST00000399240 LINC01554Q52M75 96 aa10.66□□□□□ -0.7
RUNX1-205ENST00000399240 KRTAP9-6A0A140TA67 174 aa10.65□□□□□ -0.7
RUNX1-205ENST00000399240 SSPOA2VEC9 5147 aa10.65□□□□□ -0.7
RUNX1-205ENST00000399240 Q1T7F1 81 aa10.63□□□□□ -0.71
RUNX1-205ENST00000399240 SPATA8Q6RVD6 105 aa10.6□□□□□ -0.71
RUNX1-205ENST00000399240 CRCT1Q9UGL9 99 aa10.6□□□□□ -0.71
RUNX1-205ENST00000399240 V9GYY9 64 aa10.59□□□□□ -0.71
RUNX1-205ENST00000399240 PSPHP1O15172 72 aa10.51□□□□□ -0.73
RUNX1-205ENST00000399240 KRTAP19-6Q3LI70 58 aa10.47□□□□□ -0.73
RUNX1-205ENST00000399240 A0A0D9SG42 100 aa10.44□□□□□ -0.74
RUNX1-205ENST00000399240 PLAC4Q8WY50 150 aa10.44□□□□□ -0.74
RUNX1-205ENST00000399240 A6NN06 94 aa10.41□□□□□ -0.74
RUNX1-205ENST00000399240 UQCR11O14957 56 aa10.38□□□□□ -0.75
RUNX1-205ENST00000399240 A8MU10 97 aa10.36□□□□□ -0.75
RUNX1-205ENST00000399240 KRTAP10-5P60370 271 aa10.27□□□□□ -0.76
RUNX1-205ENST00000399240 FCGBPQ9Y6R7 5405 aaPredicted RBP10.26□□□□□ -0.77
RUNX1-205ENST00000399240 KRTAP12-1P59990 96 aa10.26□□□□□ -0.77
RUNX1-205ENST00000399240 MT1XP80297 61 aa10.23□□□□□ -0.77
RUNX1-205ENST00000399240 MIR22HGQ0VDD5 57 aa10.22□□□□□ -0.77
RUNX1-205ENST00000399240 SPINT4Q6UDR6 99 aa10.22□□□□□ -0.77
RUNX1-205ENST00000399240 KRTAP12-2P59991 146 aa10.22□□□□□ -0.77
RUNX1-205ENST00000399240 A6NED7 52 aa10.16□□□□□ -0.78
RUNX1-205ENST00000399240 PRO2289Q9P1D8 64 aa10.12□□□□□ -0.79
RUNX1-205ENST00000399240 CAMK2N1Q7Z7J9 78 aa10.1□□□□□ -0.79
RUNX1-205ENST00000399240 CDC42SE1Q9NRR8 79 aa9.88□□□□□ -0.83
RUNX1-205ENST00000399240 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.85□□□□□ -0.83
RUNX1-205ENST00000399240 MACF1Q9UPN3 7388 aaKnown RBP9.81□□□□□ -0.84
RUNX1-205ENST00000399240 K7ERS5 55 aa9.81□□□□□ -0.84
RUNX1-205ENST00000399240 KRTAP10-7P60409 375 aaPredicted RBP9.8□□□□□ -0.84
RUNX1-205ENST00000399240 C10orf95Q9H7T3 257 aa9.75□□□□□ -0.85
RUNX1-205ENST00000399240 BRK1Q8WUW1 75 aa9.71□□□□□ -0.85
RUNX1-205ENST00000399240 KRTAP10-12P60413 245 aa9.7□□□□□ -0.86
RUNX1-205ENST00000399240 KMT2DO14686 5537 aa9.66□□□□□ -0.86
RUNX1-205ENST00000399240 SYNE2Q8WXH0 6885 aaKnown RBP9.6□□□□□ -0.87
RUNX1-205ENST00000399240 KRTAP4-8A0A0G2JLE6 195 aa9.58□□□□□ -0.88
RUNX1-205ENST00000399240 KRTAP4-8Q9BYQ9 185 aa9.58□□□□□ -0.88
RUNX1-205ENST00000399240 KRTAP9-7A8MTY7 169 aa9.57□□□□□ -0.88
RUNX1-205ENST00000399240 TNP1P09430 55 aa9.5□□□□□ -0.89
RUNX1-205ENST00000399240 KRTAP8-1Q8IUC2 63 aa9.44□□□□□ -0.9
RUNX1-205ENST00000399240 KRTAP6-3Q3LI67 103 aa9.41□□□□□ -0.9
RUNX1-205ENST00000399240 PRO0628Q9UI54 55 aa9.4□□□□□ -0.9
RUNX1-205ENST00000399240 ROMO1P60602 79 aa9.36□□□□□ -0.91
RUNX1-205ENST00000399240 KRTAP5-9P26371 169 aa9.33□□□□□ -0.92
RUNX1-205ENST00000399240 KRTAP25-1Q3LHN0 102 aa9.33□□□□□ -0.92
RUNX1-205ENST00000399240 LCE3AQ5TA76 89 aa9.27□□□□□ -0.93
RUNX1-205ENST00000399240 SPRR2FQ96RM1 72 aa9.24□□□□□ -0.93
RUNX1-205ENST00000399240 PMAIP1Q13794 54 aa9.2□□□□□ -0.94
RUNX1-205ENST00000399240 MUC12Q9UKN1 5478 aa9.14□□□□□ -0.95
RUNX1-205ENST00000399240 KRTAP19-7Q3SYF9 63 aa9.14□□□□□ -0.95
RUNX1-205ENST00000399240 KRTAP19-5Q3LI72 72 aa9.1□□□□□ -0.95
RUNX1-205ENST00000399240 KRTAP23-1A1A580 65 aa9.01□□□□□ -0.97
RUNX1-205ENST00000399240 MT1EP04732 61 aa9□□□□□ -0.97
RUNX1-205ENST00000399240 MDN1Q9NU22 5596 aa8.98□□□□□ -0.97
RUNX1-205ENST00000399240 LCE1AQ5T7P2 110 aa8.92□□□□□ -0.98
RUNX1-205ENST00000399240 SPRR2EP22531 72 aa8.91□□□□□ -0.98
RUNX1-205ENST00000399240 SPRR2BP35325 72 aa8.91□□□□□ -0.98
RUNX1-205ENST00000399240 SPRR2AP35326 72 aa8.91□□□□□ -0.98
RUNX1-205ENST00000399240 KRTAP12-3P60328 96 aa8.9□□□□□ -0.99
RUNX1-205ENST00000399240 PP632Q6XCG6 107 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms