RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 KRTAP4-5Q9BYR2 181 aa8.4□□□□□ -1.06
COL25A1-201ENST00000399126 BIRC6Q9NR09 4857 aa8.37□□□□□ -1.07
COL25A1-201ENST00000399126 C9orf92A6NGG3 77 aa8.36□□□□□ -1.07
COL25A1-201ENST00000399126 C20orf166-AS1Q96NR2 134 aa8.36□□□□□ -1.07
COL25A1-201ENST00000399126 MT1HL1P0DM35 61 aa8.35□□□□□ -1.07
COL25A1-201ENST00000399126 KRTAP13-3Q3SY46 172 aa8.35□□□□□ -1.07
COL25A1-201ENST00000399126 NDUFAF8A1L188 74 aa8.34□□□□□ -1.07
COL25A1-201ENST00000399126 K7ERS5 55 aa8.33□□□□□ -1.08
COL25A1-201ENST00000399126 HERC2O95714 4834 aa8.33□□□□□ -1.08
COL25A1-201ENST00000399126 A0A1B0GU69 56 aa8.31□□□□□ -1.08
COL25A1-201ENST00000399126 UQCR11O14957 56 aa8.29□□□□□ -1.08
COL25A1-201ENST00000399126 KRTAP25-1Q3LHN0 102 aa8.25□□□□□ -1.09
COL25A1-201ENST00000399126 ACYP2P14621 99 aa8.22□□□□□ -1.09
COL25A1-201ENST00000399126 A8MUU9 505 aa8.22□□□□□ -1.09
COL25A1-201ENST00000399126 IGKV2D-30A0A075B6S6 120 aa8.17□□□□□ -1.1
COL25A1-201ENST00000399126 IGKV2-30P06310 120 aa8.17□□□□□ -1.1
COL25A1-201ENST00000399126 LPAP08519 4548 aa8.17□□□□□ -1.1
COL25A1-201ENST00000399126 LRP2P98164 4655 aa8.14□□□□□ -1.11
COL25A1-201ENST00000399126 PCLOQ9Y6V0 5065 aa8.1□□□□□ -1.11
COL25A1-201ENST00000399126 DMAC1Q96GE9 116 aa8.09□□□□□ -1.11
COL25A1-201ENST00000399126 XP32Q5T750 250 aa8.07□□□□□ -1.12
COL25A1-201ENST00000399126 HERC1Q15751 4861 aa8□□□□□ -1.13
COL25A1-201ENST00000399126 RPL37P61927 97 aaKnown RBP8□□□□□ -1.13
COL25A1-201ENST00000399126 KRTAP23-1A1A580 65 aa7.95□□□□□ -1.14
COL25A1-201ENST00000399126 CAMK2N1Q7Z7J9 78 aa7.95□□□□□ -1.14
COL25A1-201ENST00000399126 TPRXLQ17RH7 258 aa7.94□□□□□ -1.14
COL25A1-201ENST00000399126 KRTAP3-1Q9BYR8 98 aa7.86□□□□□ -1.15
COL25A1-201ENST00000399126 KRTAP15-1Q3LI76 137 aa7.84□□□□□ -1.15
COL25A1-201ENST00000399126 SPINT4Q6UDR6 99 aa7.84□□□□□ -1.16
COL25A1-201ENST00000399126 HMCN2Q8NDA2 5059 aa7.82□□□□□ -1.16
COL25A1-201ENST00000399126 H0YAA0 97 aa7.77□□□□□ -1.17
COL25A1-201ENST00000399126 CRIPTQ9P021 101 aa7.77□□□□□ -1.17
COL25A1-201ENST00000399126 MUC17Q685J3 4493 aa7.76□□□□□ -1.17
COL25A1-201ENST00000399126 COX6B2Q6YFQ2 88 aa7.75□□□□□ -1.17
COL25A1-201ENST00000399126 MUC2Q02817 5179 aa7.73□□□□□ -1.17
COL25A1-201ENST00000399126 KRTAP4-1Q9BYQ7 146 aa7.65□□□□□ -1.18
COL25A1-201ENST00000399126 A0A1B0GU33 70 aa7.6□□□□□ -1.19
COL25A1-201ENST00000399126 KRTAP3-3Q9BYR6 98 aa7.55□□□□□ -1.2
COL25A1-201ENST00000399126 UBR4Q5T4S7 5183 aa7.55□□□□□ -1.2
COL25A1-201ENST00000399126 H1FX-AS1Q4G0G2 97 aa7.54□□□□□ -1.2
COL25A1-201ENST00000399126 S4R3F8 94 aa7.52□□□□□ -1.21
COL25A1-201ENST00000399126 RNF213Q63HN8 5207 aa7.49□□□□□ -1.21
COL25A1-201ENST00000399126 KRTAP3-2Q9BYR7 98 aa7.49□□□□□ -1.21
COL25A1-201ENST00000399126 KRTAP19-2Q3LHN2 52 aa7.42□□□□□ -1.22
COL25A1-201ENST00000399126 FAT4Q6V0I7 4981 aa7.41□□□□□ -1.22
COL25A1-201ENST00000399126 FLGP20930 4061 aaPredicted RBP7.36□□□□□ -1.23
COL25A1-201ENST00000399126 C10orf95Q9H7T3 257 aa7.35□□□□□ -1.23
COL25A1-201ENST00000399126 KRTAP10-6P60371 365 aaPredicted RBP7.31□□□□□ -1.24
COL25A1-201ENST00000399126 R4GN34 69 aa7.27□□□□□ -1.25
COL25A1-201ENST00000399126 PRO2289Q9P1D8 64 aa7.22□□□□□ -1.25
COL25A1-201ENST00000399126 KRTAP13-4Q3LI77 160 aa7.19□□□□□ -1.26
COL25A1-201ENST00000399126 LCE2CQ5TA81 110 aa7.19□□□□□ -1.26
COL25A1-201ENST00000399126 A0A0D9SG42 100 aa7.07□□□□□ -1.28
COL25A1-201ENST00000399126 LORP23490 312 aaPredicted RBP7.07□□□□□ -1.28
COL25A1-201ENST00000399126 LCE2AQ5TA79 106 aaPredicted RBP7.04□□□□□ -1.28
COL25A1-201ENST00000399126 MT1HP80294 61 aa7.03□□□□□ -1.28
COL25A1-201ENST00000399126 LCE2DQ5TA82 110 aaPredicted RBP7□□□□□ -1.29
COL25A1-201ENST00000399126 M0QZ58 72 aa6.96□□□□□ -1.29
COL25A1-201ENST00000399126 M0R2T5 61 aa6.96□□□□□ -1.3
COL25A1-201ENST00000399126 PLAC4Q8WY50 150 aa6.94□□□□□ -1.3
COL25A1-201ENST00000399126 KRTAP12-2P59991 146 aa6.89□□□□□ -1.31
COL25A1-201ENST00000399126 KRTAP12-1P59990 96 aa6.85□□□□□ -1.31
COL25A1-201ENST00000399126 MT2AP02795 61 aa6.78□□□□□ -1.32
COL25A1-201ENST00000399126 KRTAP9-8Q9BYQ0 159 aa6.78□□□□□ -1.32
COL25A1-201ENST00000399126 MT1FP04733 61 aa6.77□□□□□ -1.33
COL25A1-201ENST00000399126 KRTAP10-10P60014 251 aa6.72□□□□□ -1.33
COL25A1-201ENST00000399126 KRTAP19-1Q8IUB9 90 aa6.69□□□□□ -1.34
COL25A1-201ENST00000399126 SPRR2GQ9BYE4 73 aa6.64□□□□□ -1.35
COL25A1-201ENST00000399126 LCE2BO14633 110 aa6.62□□□□□ -1.35
COL25A1-201ENST00000399126 INE1O15225 51 aa6.58□□□□□ -1.36
COL25A1-201ENST00000399126 KRTAP9-3Q9BYQ3 159 aa6.53□□□□□ -1.36
COL25A1-201ENST00000399126 USH2AO75445 5202 aa6.46□□□□□ -1.38
COL25A1-201ENST00000399126 PP632Q6XCG6 107 aa6.44□□□□□ -1.38
COL25A1-201ENST00000399126 KRTAP19-8Q3LI54 63 aa6.43□□□□□ -1.38
COL25A1-201ENST00000399126 MT1BP07438 61 aa6.42□□□□□ -1.38
COL25A1-201ENST00000399126 SPRR5A0A1B0GTR4 108 aa6.32□□□□□ -1.4
COL25A1-201ENST00000399126 MT1XP80297 61 aa6.25□□□□□ -1.41
COL25A1-201ENST00000399126 KRTAP10-5P60370 271 aa6.24□□□□□ -1.41
COL25A1-201ENST00000399126 FSIP2Q5CZC0 6907 aa6.21□□□□□ -1.41
COL25A1-201ENST00000399126 TNP1P09430 55 aa6.18□□□□□ -1.42
COL25A1-201ENST00000399126 SSPOA2VEC9 5147 aa6.16□□□□□ -1.42
COL25A1-201ENST00000399126 KMT2DO14686 5537 aa6.05□□□□□ -1.44
COL25A1-201ENST00000399126 KRTAP10-7P60409 375 aaPredicted RBP6.04□□□□□ -1.44
COL25A1-201ENST00000399126 LCE3AQ5TA76 89 aa6□□□□□ -1.45
COL25A1-201ENST00000399126 KRTAP10-12P60413 245 aa5.93□□□□□ -1.46
COL25A1-201ENST00000399126 KRTAP19-6Q3LI70 58 aa5.84□□□□□ -1.47
COL25A1-201ENST00000399126 KRTAP4-8A0A0G2JLE6 195 aa5.82□□□□□ -1.48
COL25A1-201ENST00000399126 KRTAP4-8Q9BYQ9 185 aa5.82□□□□□ -1.48
COL25A1-201ENST00000399126 FCGBPQ9Y6R7 5405 aaPredicted RBP5.82□□□□□ -1.48
COL25A1-201ENST00000399126 KRTAP8-1Q8IUC2 63 aa5.8□□□□□ -1.48
COL25A1-201ENST00000399126 KRTAP12-3P60328 96 aa5.71□□□□□ -1.5
COL25A1-201ENST00000399126 KRTAP9-2Q9BYQ4 174 aa5.69□□□□□ -1.5
COL25A1-201ENST00000399126 KRTAP19-5Q3LI72 72 aa5.69□□□□□ -1.5
COL25A1-201ENST00000399126 KRTAP2-2Q9BYT5 123 aa5.65□□□□□ -1.51
COL25A1-201ENST00000399126 MACF1Q9UPN3 7388 aaKnown RBP5.59□□□□□ -1.51
COL25A1-201ENST00000399126 KRTAP19-7Q3SYF9 63 aa5.58□□□□□ -1.52
COL25A1-201ENST00000399126 MUC12Q9UKN1 5478 aa5.52□□□□□ -1.53
COL25A1-201ENST00000399126 LCE5AQ5TCM9 118 aa5.51□□□□□ -1.53
COL25A1-201ENST00000399126 CRCT1Q9UGL9 99 aa5.48□□□□□ -1.53
COL25A1-201ENST00000399126 SYNE2Q8WXH0 6885 aaKnown RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms