RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 FAT3Q8TDW7 4589 aa9.26□□□□□ -0.93
HLA-DQB1-204ENST00000399084 DMBT1Q9UGM3 2413 aaPredicted RBP9.25□□□□□ -0.93
HLA-DQB1-204ENST00000399084 MIR22HGQ0VDD5 57 aa9.24□□□□□ -0.93
HLA-DQB1-204ENST00000399084 HERC1Q15751 4861 aa9.23□□□□□ -0.93
HLA-DQB1-204ENST00000399084 TPRXLQ17RH7 258 aa9.22□□□□□ -0.93
HLA-DQB1-204ENST00000399084 LRP1Q07954 4544 aaKnown RBP9.21□□□□□ -0.94
HLA-DQB1-204ENST00000399084 A6NN06 94 aa9.2□□□□□ -0.94
HLA-DQB1-204ENST00000399084 KTN1-AS1Q86SY8 53 aa9.12□□□□□ -0.95
HLA-DQB1-204ENST00000399084 A0A1B0GU33 70 aa9.07□□□□□ -0.96
HLA-DQB1-204ENST00000399084 H1FX-AS1Q4G0G2 97 aa9.03□□□□□ -0.96
HLA-DQB1-204ENST00000399084 S4R3F8 94 aa9.02□□□□□ -0.97
HLA-DQB1-204ENST00000399084 KRTAP3-3Q9BYR6 98 aa8.99□□□□□ -0.97
HLA-DQB1-204ENST00000399084 RBM12B-AS1Q9P1G2 102 aa8.97□□□□□ -0.97
HLA-DQB1-204ENST00000399084 H0YAA0 97 aa8.94□□□□□ -0.98
HLA-DQB1-204ENST00000399084 MYCBP2O75592 4640 aa8.92□□□□□ -0.98
HLA-DQB1-204ENST00000399084 SEC61BP60468 96 aaKnown RBP8.91□□□□□ -0.98
HLA-DQB1-204ENST00000399084 UBR4Q5T4S7 5183 aa8.89□□□□□ -0.99
HLA-DQB1-204ENST00000399084 J3QL48 77 aa8.86□□□□□ -0.99
HLA-DQB1-204ENST00000399084 KRTAP10-6P60371 365 aaPredicted RBP8.84□□□□□ -0.99
HLA-DQB1-204ENST00000399084 K7ERS5 55 aa8.83□□□□□ -1
HLA-DQB1-204ENST00000399084 CSAG1Q6PB30 78 aa8.82□□□□□ -1
HLA-DQB1-204ENST00000399084 KRTAP3-2Q9BYR7 98 aa8.8□□□□□ -1
HLA-DQB1-204ENST00000399084 HMCN2Q8NDA2 5059 aa8.71□□□□□ -1.02
HLA-DQB1-204ENST00000399084 ADM2Q7Z4H4 148 aa8.66□□□□□ -1.02
HLA-DQB1-204ENST00000399084 LRP2P98164 4655 aa8.65□□□□□ -1.02
HLA-DQB1-204ENST00000399084 P0C880 135 aa8.64□□□□□ -1.03
HLA-DQB1-204ENST00000399084 M0QZ58 72 aa8.63□□□□□ -1.03
HLA-DQB1-204ENST00000399084 KRTAP13-4Q3LI77 160 aa8.6□□□□□ -1.03
HLA-DQB1-204ENST00000399084 PRAC1Q96KF2 57 aa8.57□□□□□ -1.04
HLA-DQB1-204ENST00000399084 LPAP08519 4548 aa8.51□□□□□ -1.05
HLA-DQB1-204ENST00000399084 A0A0D9SG42 100 aa8.49□□□□□ -1.05
HLA-DQB1-204ENST00000399084 KRTAP4-1Q9BYQ7 146 aa8.49□□□□□ -1.05
HLA-DQB1-204ENST00000399084 ROMO1P60602 79 aa8.47□□□□□ -1.05
HLA-DQB1-204ENST00000399084 KRTAP19-2Q3LHN2 52 aa8.42□□□□□ -1.06
HLA-DQB1-204ENST00000399084 RNF213Q63HN8 5207 aa8.4□□□□□ -1.06
HLA-DQB1-204ENST00000399084 MUC17Q685J3 4493 aa8.38□□□□□ -1.07
HLA-DQB1-204ENST00000399084 KRTAP25-1Q3LHN0 102 aa8.38□□□□□ -1.07
HLA-DQB1-204ENST00000399084 LINC01554Q52M75 96 aa8.38□□□□□ -1.07
HLA-DQB1-204ENST00000399084 KRTAP12-1P59990 96 aa8.37□□□□□ -1.07
HLA-DQB1-204ENST00000399084 R4GN34 69 aa8.35□□□□□ -1.07
HLA-DQB1-204ENST00000399084 KRTAP12-2P59991 146 aa8.33□□□□□ -1.08
HLA-DQB1-204ENST00000399084 SPINT4Q6UDR6 99 aa8.3□□□□□ -1.08
HLA-DQB1-204ENST00000399084 CRIPTQ9P021 101 aa8.2□□□□□ -1.1
HLA-DQB1-204ENST00000399084 KRTAP9-2Q9BYQ4 174 aa8.11□□□□□ -1.11
HLA-DQB1-204ENST00000399084 LORP23490 312 aaPredicted RBP8.1□□□□□ -1.11
HLA-DQB1-204ENST00000399084 FLGP20930 4061 aaPredicted RBP8.06□□□□□ -1.12
HLA-DQB1-204ENST00000399084 KRTAP9-6A0A140TA67 174 aa8.01□□□□□ -1.13
HLA-DQB1-204ENST00000399084 LCE2CQ5TA81 110 aa8.01□□□□□ -1.13
HLA-DQB1-204ENST00000399084 FAT4Q6V0I7 4981 aa7.92□□□□□ -1.14
HLA-DQB1-204ENST00000399084 C10orf95Q9H7T3 257 aa7.89□□□□□ -1.15
HLA-DQB1-204ENST00000399084 CAMK2N1Q7Z7J9 78 aa7.89□□□□□ -1.15
HLA-DQB1-204ENST00000399084 MUC2Q02817 5179 aa7.84□□□□□ -1.15
HLA-DQB1-204ENST00000399084 M0R2T5 61 aa7.82□□□□□ -1.16
HLA-DQB1-204ENST00000399084 MT1HP80294 61 aa7.82□□□□□ -1.16
HLA-DQB1-204ENST00000399084 SPRR2GQ9BYE4 73 aa7.81□□□□□ -1.16
HLA-DQB1-204ENST00000399084 LCE2AQ5TA79 106 aaPredicted RBP7.8□□□□□ -1.16
HLA-DQB1-204ENST00000399084 PP632Q6XCG6 107 aa7.77□□□□□ -1.17
HLA-DQB1-204ENST00000399084 PLAC4Q8WY50 150 aa7.69□□□□□ -1.18
HLA-DQB1-204ENST00000399084 KRTAP23-1A1A580 65 aa7.66□□□□□ -1.18
HLA-DQB1-204ENST00000399084 KRTAP19-1Q8IUB9 90 aa7.66□□□□□ -1.18
HLA-DQB1-204ENST00000399084 MT2AP02795 61 aa7.63□□□□□ -1.19
HLA-DQB1-204ENST00000399084 TNP1P09430 55 aa7.63□□□□□ -1.19
HLA-DQB1-204ENST00000399084 KRTAP10-10P60014 251 aa7.62□□□□□ -1.19
HLA-DQB1-204ENST00000399084 KRTAP9-8Q9BYQ0 159 aa7.62□□□□□ -1.19
HLA-DQB1-204ENST00000399084 MT1FP04733 61 aa7.57□□□□□ -1.2
HLA-DQB1-204ENST00000399084 CRCT1Q9UGL9 99 aa7.57□□□□□ -1.2
HLA-DQB1-204ENST00000399084 LCE2DQ5TA82 110 aaPredicted RBP7.54□□□□□ -1.2
HLA-DQB1-204ENST00000399084 KRTAP15-1Q3LI76 137 aa7.53□□□□□ -1.2
HLA-DQB1-204ENST00000399084 KRTAP19-8Q3LI54 63 aa7.52□□□□□ -1.2
HLA-DQB1-204ENST00000399084 FSIP2Q5CZC0 6907 aa7.52□□□□□ -1.21
HLA-DQB1-204ENST00000399084 KRTAP9-3Q9BYQ3 159 aa7.33□□□□□ -1.24
HLA-DQB1-204ENST00000399084 MT1BP07438 61 aa7.3□□□□□ -1.24
HLA-DQB1-204ENST00000399084 KRTAP10-5P60370 271 aa7.19□□□□□ -1.26
HLA-DQB1-204ENST00000399084 MT1XP80297 61 aa7.18□□□□□ -1.26
HLA-DQB1-204ENST00000399084 PRO2289Q9P1D8 64 aa7.18□□□□□ -1.26
HLA-DQB1-204ENST00000399084 KRTAP9-7A8MTY7 169 aa7.15□□□□□ -1.27
HLA-DQB1-204ENST00000399084 NDUFAF8A1L188 74 aa7.13□□□□□ -1.27
HLA-DQB1-204ENST00000399084 LCE3AQ5TA76 89 aa7.1□□□□□ -1.27
HLA-DQB1-204ENST00000399084 KRTAP8-1Q8IUC2 63 aa7.09□□□□□ -1.27
HLA-DQB1-204ENST00000399084 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.08□□□□□ -1.28
HLA-DQB1-204ENST00000399084 H3BS24 57 aa7.07□□□□□ -1.28
HLA-DQB1-204ENST00000399084 LUZP6Q538Z0 58 aa7.07□□□□□ -1.28
HLA-DQB1-204ENST00000399084 SPRR5A0A1B0GTR4 108 aa7.01□□□□□ -1.29
HLA-DQB1-204ENST00000399084 KRTAP10-12P60413 245 aa7.01□□□□□ -1.29
HLA-DQB1-204ENST00000399084 LCE2BO14633 110 aa6.98□□□□□ -1.29
HLA-DQB1-204ENST00000399084 KRTAP10-7P60409 375 aaPredicted RBP6.88□□□□□ -1.31
HLA-DQB1-204ENST00000399084 KRTAP12-3P60328 96 aa6.87□□□□□ -1.31
HLA-DQB1-204ENST00000399084 SSPOA2VEC9 5147 aa6.84□□□□□ -1.31
HLA-DQB1-204ENST00000399084 USH2AO75445 5202 aa6.79□□□□□ -1.32
HLA-DQB1-204ENST00000399084 FCGBPQ9Y6R7 5405 aaPredicted RBP6.75□□□□□ -1.33
HLA-DQB1-204ENST00000399084 SYNE2Q8WXH0 6885 aaKnown RBP6.63□□□□□ -1.35
HLA-DQB1-204ENST00000399084 KRTAP19-4Q3LI73 84 aa6.61□□□□□ -1.35
HLA-DQB1-204ENST00000399084 MACF1Q9UPN3 7388 aaKnown RBP6.6□□□□□ -1.35
HLA-DQB1-204ENST00000399084 KRTAP19-5Q3LI72 72 aa6.59□□□□□ -1.35
HLA-DQB1-204ENST00000399084 KRTAP19-6Q3LI70 58 aa6.53□□□□□ -1.36
HLA-DQB1-204ENST00000399084 A0A0A0MQY5 61 aa6.52□□□□□ -1.37
HLA-DQB1-204ENST00000399084 LCE3CQ5T5A8 94 aa6.46□□□□□ -1.38
HLA-DQB1-204ENST00000399084 KRTAP4-8A0A0G2JLE6 195 aa6.45□□□□□ -1.38
HLA-DQB1-204ENST00000399084 KRTAP4-8Q9BYQ9 185 aa6.45□□□□□ -1.38
HLA-DQB1-204ENST00000399084 KRTAP6-3Q3LI67 103 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms