RNA–Protein interactions for RNA: ENST00000398793.6

TOP3B-202, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 3,107 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-202ENST00000398793 HERC1Q15751 4861 aa7.33□□□□□ -1.24
TOP3B-202ENST00000398793 KRTAP13-3Q3SY46 172 aa7.32□□□□□ -1.24
TOP3B-202ENST00000398793 PCLOQ9Y6V0 5065 aa7.32□□□□□ -1.24
TOP3B-202ENST00000398793 SPINK1P00995 79 aa7.32□□□□□ -1.24
TOP3B-202ENST00000398793 LRP2P98164 4655 aa7.29□□□□□ -1.24
TOP3B-202ENST00000398793 P0C880 135 aa7.28□□□□□ -1.24
TOP3B-202ENST00000398793 CRIPTQ9P021 101 aa7.28□□□□□ -1.24
TOP3B-202ENST00000398793 IGKV2D-30A0A075B6S6 120 aa7.27□□□□□ -1.24
TOP3B-202ENST00000398793 IGKV2-30P06310 120 aa7.27□□□□□ -1.24
TOP3B-202ENST00000398793 A8MUU9 505 aa7.26□□□□□ -1.25
TOP3B-202ENST00000398793 BIRC6Q9NR09 4857 aa7.25□□□□□ -1.25
TOP3B-202ENST00000398793 TNXBP22105 4242 aa7.23□□□□□ -1.25
TOP3B-202ENST00000398793 MUC2Q02817 5179 aa7.22□□□□□ -1.25
TOP3B-202ENST00000398793 MT1HL1P0DM35 61 aa7.21□□□□□ -1.26
TOP3B-202ENST00000398793 KRTAP10-8P60410 259 aa7.19□□□□□ -1.26
TOP3B-202ENST00000398793 H0YAA0 97 aa7.15□□□□□ -1.26
TOP3B-202ENST00000398793 A0A0A0MQY5 61 aa7.12□□□□□ -1.27
TOP3B-202ENST00000398793 SPINT4Q6UDR6 99 aa7.11□□□□□ -1.27
TOP3B-202ENST00000398793 RNF213Q63HN8 5207 aa7.09□□□□□ -1.27
TOP3B-202ENST00000398793 NDUFAF8A1L188 74 aa7.07□□□□□ -1.28
TOP3B-202ENST00000398793 KRTAP16-1A8MUX0 517 aa7.07□□□□□ -1.28
TOP3B-202ENST00000398793 A0A1B0GU33 70 aa7.03□□□□□ -1.28
TOP3B-202ENST00000398793 K7ERS5 55 aa7□□□□□ -1.29
TOP3B-202ENST00000398793 UBR4Q5T4S7 5183 aa7□□□□□ -1.29
TOP3B-202ENST00000398793 C20orf166-AS1Q96NR2 134 aa6.99□□□□□ -1.29
TOP3B-202ENST00000398793 XP32Q5T750 250 aa6.98□□□□□ -1.29
TOP3B-202ENST00000398793 H1FX-AS1Q4G0G2 97 aa6.95□□□□□ -1.3
TOP3B-202ENST00000398793 RPS29P62273 56 aaKnown RBP6.9□□□□□ -1.3
TOP3B-202ENST00000398793 TPRXLQ17RH7 258 aa6.86□□□□□ -1.31
TOP3B-202ENST00000398793 FAT4Q6V0I7 4981 aa6.86□□□□□ -1.31
TOP3B-202ENST00000398793 KRTAP15-1Q3LI76 137 aa6.85□□□□□ -1.31
TOP3B-202ENST00000398793 C10orf95Q9H7T3 257 aa6.84□□□□□ -1.31
TOP3B-202ENST00000398793 RPL37P61927 97 aaKnown RBP6.81□□□□□ -1.32
TOP3B-202ENST00000398793 COX6B2Q6YFQ2 88 aa6.79□□□□□ -1.32
TOP3B-202ENST00000398793 HMCN2Q8NDA2 5059 aa6.75□□□□□ -1.33
TOP3B-202ENST00000398793 A0A0D9SG42 100 aa6.73□□□□□ -1.33
TOP3B-202ENST00000398793 KRTAP4-1Q9BYQ7 146 aa6.72□□□□□ -1.33
TOP3B-202ENST00000398793 LUZP6Q538Z0 58 aa6.69□□□□□ -1.34
TOP3B-202ENST00000398793 KRTAP3-1Q9BYR8 98 aa6.69□□□□□ -1.34
TOP3B-202ENST00000398793 SEC61BP60468 96 aaKnown RBP6.62□□□□□ -1.35
TOP3B-202ENST00000398793 KRTAP13-4Q3LI77 160 aa6.58□□□□□ -1.36
TOP3B-202ENST00000398793 M0R2T5 61 aa6.5□□□□□ -1.37
TOP3B-202ENST00000398793 KRTAP10-6P60371 365 aaPredicted RBP6.49□□□□□ -1.37
TOP3B-202ENST00000398793 S4R3F8 94 aa6.49□□□□□ -1.37
TOP3B-202ENST00000398793 MUC17Q685J3 4493 aa6.46□□□□□ -1.38
TOP3B-202ENST00000398793 KRTAP12-2P59991 146 aa6.43□□□□□ -1.38
TOP3B-202ENST00000398793 FSIP2Q5CZC0 6907 aa6.38□□□□□ -1.39
TOP3B-202ENST00000398793 KRTAP3-3Q9BYR6 98 aa6.37□□□□□ -1.39
TOP3B-202ENST00000398793 KRTAP3-2Q9BYR7 98 aa6.37□□□□□ -1.39
TOP3B-202ENST00000398793 KRTAP12-1P59990 96 aa6.3□□□□□ -1.4
TOP3B-202ENST00000398793 PLAC4Q8WY50 150 aa6.3□□□□□ -1.4
TOP3B-202ENST00000398793 LORP23490 312 aaPredicted RBP6.24□□□□□ -1.41
TOP3B-202ENST00000398793 FLGP20930 4061 aaPredicted RBP6.17□□□□□ -1.42
TOP3B-202ENST00000398793 KRTAP19-2Q3LHN2 52 aa6.17□□□□□ -1.42
TOP3B-202ENST00000398793 USH2AO75445 5202 aa6.16□□□□□ -1.42
TOP3B-202ENST00000398793 M0QZ58 72 aa6.16□□□□□ -1.42
TOP3B-202ENST00000398793 LCE2CQ5TA81 110 aa6.15□□□□□ -1.43
TOP3B-202ENST00000398793 R4GN34 69 aa6.13□□□□□ -1.43
TOP3B-202ENST00000398793 MT1HP80294 61 aa6.11□□□□□ -1.43
TOP3B-202ENST00000398793 KRTAP10-10P60014 251 aa6.08□□□□□ -1.44
TOP3B-202ENST00000398793 MT1FP04733 61 aa5.92□□□□□ -1.46
TOP3B-202ENST00000398793 MT2AP02795 61 aa5.88□□□□□ -1.47
TOP3B-202ENST00000398793 CAMK2N1Q7Z7J9 78 aa5.85□□□□□ -1.47
TOP3B-202ENST00000398793 KRTAP9-8Q9BYQ0 159 aa5.82□□□□□ -1.48
TOP3B-202ENST00000398793 PP632Q6XCG6 107 aa5.81□□□□□ -1.48
TOP3B-202ENST00000398793 PRO2289Q9P1D8 64 aa5.75□□□□□ -1.49
TOP3B-202ENST00000398793 KMT2DO14686 5537 aa5.73□□□□□ -1.49
TOP3B-202ENST00000398793 KRTAP19-1Q8IUB9 90 aa5.71□□□□□ -1.5
TOP3B-202ENST00000398793 LCE2AQ5TA79 106 aaPredicted RBP5.68□□□□□ -1.5
TOP3B-202ENST00000398793 SPRR5A0A1B0GTR4 108 aa5.61□□□□□ -1.51
TOP3B-202ENST00000398793 LCE2BO14633 110 aa5.59□□□□□ -1.51
TOP3B-202ENST00000398793 KRTAP9-3Q9BYQ3 159 aa5.57□□□□□ -1.52
TOP3B-202ENST00000398793 SPRR2GQ9BYE4 73 aa5.52□□□□□ -1.53
TOP3B-202ENST00000398793 SSPOA2VEC9 5147 aa5.52□□□□□ -1.53
TOP3B-202ENST00000398793 INE1O15225 51 aa5.5□□□□□ -1.53
TOP3B-202ENST00000398793 MT1BP07438 61 aa5.49□□□□□ -1.53
TOP3B-202ENST00000398793 TNP1P09430 55 aa5.48□□□□□ -1.53
TOP3B-202ENST00000398793 KRTAP23-1A1A580 65 aa5.34□□□□□ -1.55
TOP3B-202ENST00000398793 MT1XP80297 61 aa5.33□□□□□ -1.56
TOP3B-202ENST00000398793 KRTAP10-5P60370 271 aa5.31□□□□□ -1.56
TOP3B-202ENST00000398793 KRTAP10-7P60409 375 aaPredicted RBP5.31□□□□□ -1.56
TOP3B-202ENST00000398793 KRTAP19-8Q3LI54 63 aa5.31□□□□□ -1.56
TOP3B-202ENST00000398793 KRTAP4-8A0A0G2JLE6 195 aa5.29□□□□□ -1.56
TOP3B-202ENST00000398793 KRTAP4-8Q9BYQ9 185 aa5.29□□□□□ -1.56
TOP3B-202ENST00000398793 FCGBPQ9Y6R7 5405 aaPredicted RBP5.29□□□□□ -1.56
TOP3B-202ENST00000398793 SYNE2Q8WXH0 6885 aaKnown RBP5.27□□□□□ -1.57
TOP3B-202ENST00000398793 DSTQ03001 7570 aaKnown RBP5.26□□□□□ -1.57
TOP3B-202ENST00000398793 MACF1Q9UPN3 7388 aaKnown RBP5.23□□□□□ -1.57
TOP3B-202ENST00000398793 MUC12Q9UKN1 5478 aa5.23□□□□□ -1.57
TOP3B-202ENST00000398793 LCE3AQ5TA76 89 aa5.22□□□□□ -1.57
TOP3B-202ENST00000398793 KRTAP9-2Q9BYQ4 174 aa5.21□□□□□ -1.58
TOP3B-202ENST00000398793 KRTAP10-12P60413 245 aa5.13□□□□□ -1.59
TOP3B-202ENST00000398793 LCE2DQ5TA82 110 aaPredicted RBP5.09□□□□□ -1.59
TOP3B-202ENST00000398793 CRCT1Q9UGL9 99 aa4.97□□□□□ -1.61
TOP3B-202ENST00000398793 MDN1Q9NU22 5596 aa4.97□□□□□ -1.61
TOP3B-202ENST00000398793 KRTAP19-5Q3LI72 72 aa4.97□□□□□ -1.61
TOP3B-202ENST00000398793 KRTAP12-3P60328 96 aa4.92□□□□□ -1.62
TOP3B-202ENST00000398793 KRTAP19-6Q3LI70 58 aa4.92□□□□□ -1.62
TOP3B-202ENST00000398793 KRTAP8-1Q8IUC2 63 aa4.91□□□□□ -1.62
TOP3B-202ENST00000398793 OBSCNQ5VST9 7968 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms