RNA–Protein interactions for RNA: ENST00000398527.6

MSL3-207, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-207ENST00000398527 SSBP3-AS1Q7Z2R9 100 aa6.16□□□□□ -1.42
MSL3-207ENST00000398527 KRTAP10-2P60368 255 aa6.16□□□□□ -1.42
MSL3-207ENST00000398527 IGLV7-43P04211 117 aa6.14□□□□□ -1.43
MSL3-207ENST00000398527 A0A1B0GU33 70 aa6.14□□□□□ -1.43
MSL3-207ENST00000398527 PSORS1C2Q9UIG4 136 aa6.14□□□□□ -1.43
MSL3-207ENST00000398527 RNF213Q63HN8 5207 aa6.11□□□□□ -1.43
MSL3-207ENST00000398527 CRIPTQ9P021 101 aa6.1□□□□□ -1.43
MSL3-207ENST00000398527 SMR3BP02814 79 aaPredicted RBP6.08□□□□□ -1.44
MSL3-207ENST00000398527 ACYP2P14621 99 aa6.08□□□□□ -1.44
MSL3-207ENST00000398527 MRPL34Q9BQ48 92 aaKnown RBP6.07□□□□□ -1.44
MSL3-207ENST00000398527 DNAH8Q96JB1 4490 aa6.04□□□□□ -1.44
MSL3-207ENST00000398527 LRP1Q07954 4544 aaKnown RBP6.03□□□□□ -1.44
MSL3-207ENST00000398527 FAT3Q8TDW7 4589 aa6.02□□□□□ -1.45
MSL3-207ENST00000398527 KRTAP10-1P60331 282 aa6.02□□□□□ -1.45
MSL3-207ENST00000398527 PKHD1L1Q86WI1 4243 aa6.02□□□□□ -1.45
MSL3-207ENST00000398527 KRTAP9-2Q9BYQ4 174 aa6□□□□□ -1.45
MSL3-207ENST00000398527 Q6ZSA8 131 aa6□□□□□ -1.45
MSL3-207ENST00000398527 KRTAP9-6A0A140TA67 174 aa5.99□□□□□ -1.45
MSL3-207ENST00000398527 KRTAP13-3Q3SY46 172 aa5.99□□□□□ -1.45
MSL3-207ENST00000398527 LRP2P98164 4655 aa5.98□□□□□ -1.45
MSL3-207ENST00000398527 ANAPC11Q9NYG5 84 aa5.96□□□□□ -1.46
MSL3-207ENST00000398527 TPRXLQ17RH7 258 aa5.93□□□□□ -1.46
MSL3-207ENST00000398527 PRO2289Q9P1D8 64 aa5.9□□□□□ -1.46
MSL3-207ENST00000398527 TNXBP22105 4242 aa5.89□□□□□ -1.47
MSL3-207ENST00000398527 H0YAA0 97 aa5.89□□□□□ -1.47
MSL3-207ENST00000398527 KRTAP13-2Q52LG2 175 aa5.89□□□□□ -1.47
MSL3-207ENST00000398527 SPINK6Q6UWN8 80 aa5.88□□□□□ -1.47
MSL3-207ENST00000398527 KRTAP1-4P0C5Y4 121 aa5.86□□□□□ -1.47
MSL3-207ENST00000398527 FAT4Q6V0I7 4981 aa5.85□□□□□ -1.47
MSL3-207ENST00000398527 KRTAP10-4P60372 401 aaPredicted RBP5.85□□□□□ -1.47
MSL3-207ENST00000398527 RPS29P62273 56 aaKnown RBP5.85□□□□□ -1.47
MSL3-207ENST00000398527 IGKV2-30P06310 120 aa5.84□□□□□ -1.47
MSL3-207ENST00000398527 R4GN34 69 aa5.82□□□□□ -1.48
MSL3-207ENST00000398527 SPINK1P00995 79 aa5.82□□□□□ -1.48
MSL3-207ENST00000398527 MT1HL1P0DM35 61 aa5.81□□□□□ -1.48
MSL3-207ENST00000398527 TYMSOSQ8TAI1 123 aa5.77□□□□□ -1.49
MSL3-207ENST00000398527 C10orf95Q9H7T3 257 aa5.71□□□□□ -1.49
MSL3-207ENST00000398527 MUC2Q02817 5179 aa5.71□□□□□ -1.5
MSL3-207ENST00000398527 IGKV2D-30A0A075B6S6 120 aa5.7□□□□□ -1.5
MSL3-207ENST00000398527 LCE2AQ5TA79 106 aaPredicted RBP5.63□□□□□ -1.51
MSL3-207ENST00000398527 PLAC4Q8WY50 150 aa5.63□□□□□ -1.51
MSL3-207ENST00000398527 LPAP08519 4548 aa5.62□□□□□ -1.51
MSL3-207ENST00000398527 H1FX-AS1Q4G0G2 97 aa5.59□□□□□ -1.51
MSL3-207ENST00000398527 CRCT1Q9UGL9 99 aa5.58□□□□□ -1.52
MSL3-207ENST00000398527 KRTAP10-8P60410 259 aa5.56□□□□□ -1.52
MSL3-207ENST00000398527 FSIP2Q5CZC0 6907 aa5.47□□□□□ -1.53
MSL3-207ENST00000398527 COX6B2Q6YFQ2 88 aa5.47□□□□□ -1.53
MSL3-207ENST00000398527 RPL37P61927 97 aaKnown RBP5.47□□□□□ -1.53
MSL3-207ENST00000398527 INE1O15225 51 aa5.46□□□□□ -1.54
MSL3-207ENST00000398527 C9orf92A6NGG3 77 aa5.46□□□□□ -1.54
MSL3-207ENST00000398527 KRTAP3-1Q9BYR8 98 aa5.45□□□□□ -1.54
MSL3-207ENST00000398527 XP32Q5T750 250 aa5.42□□□□□ -1.54
MSL3-207ENST00000398527 KRTAP9-7A8MTY7 169 aa5.32□□□□□ -1.56
MSL3-207ENST00000398527 MUC17Q685J3 4493 aa5.31□□□□□ -1.56
MSL3-207ENST00000398527 LCE2BO14633 110 aa5.28□□□□□ -1.56
MSL3-207ENST00000398527 KRTAP12-2P59991 146 aa5.25□□□□□ -1.57
MSL3-207ENST00000398527 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.23□□□□□ -1.57
MSL3-207ENST00000398527 KRTAP10-6P60371 365 aaPredicted RBP5.2□□□□□ -1.58
MSL3-207ENST00000398527 S4R3F8 94 aa5.19□□□□□ -1.58
MSL3-207ENST00000398527 A0A0D9SG42 100 aa5.13□□□□□ -1.59
MSL3-207ENST00000398527 LCE2CQ5TA81 110 aa5.13□□□□□ -1.59
MSL3-207ENST00000398527 PP632Q6XCG6 107 aa5.08□□□□□ -1.6
MSL3-207ENST00000398527 KRTAP13-4Q3LI77 160 aa5.07□□□□□ -1.6
MSL3-207ENST00000398527 M0QZ58 72 aa5.03□□□□□ -1.6
MSL3-207ENST00000398527 KRTAP4-1Q9BYQ7 146 aa5.02□□□□□ -1.61
MSL3-207ENST00000398527 LORP23490 312 aaPredicted RBP5.01□□□□□ -1.61
MSL3-207ENST00000398527 MT1HP80294 61 aa4.98□□□□□ -1.61
MSL3-207ENST00000398527 SPRR5A0A1B0GTR4 108 aa4.98□□□□□ -1.61
MSL3-207ENST00000398527 SSPOA2VEC9 5147 aa4.95□□□□□ -1.62
MSL3-207ENST00000398527 KRTAP12-1P59990 96 aa4.94□□□□□ -1.62
MSL3-207ENST00000398527 KRTAP19-2Q3LHN2 52 aa4.93□□□□□ -1.62
MSL3-207ENST00000398527 FCGBPQ9Y6R7 5405 aaPredicted RBP4.93□□□□□ -1.62
MSL3-207ENST00000398527 USH2AO75445 5202 aa4.9□□□□□ -1.62
MSL3-207ENST00000398527 SYNE2Q8WXH0 6885 aaKnown RBP4.85□□□□□ -1.63
MSL3-207ENST00000398527 M0R2T5 61 aa4.83□□□□□ -1.64
MSL3-207ENST00000398527 MACF1Q9UPN3 7388 aaKnown RBP4.82□□□□□ -1.64
MSL3-207ENST00000398527 FLGP20930 4061 aaPredicted RBP4.82□□□□□ -1.64
MSL3-207ENST00000398527 KRTAP19-1Q8IUB9 90 aa4.78□□□□□ -1.64
MSL3-207ENST00000398527 KRTAP6-3Q3LI67 103 aa4.71□□□□□ -1.66
MSL3-207ENST00000398527 NEBP20929 6669 aa4.68□□□□□ -1.66
MSL3-207ENST00000398527 KRTAP20-1Q3LI63 56 aa4.63□□□□□ -1.67
MSL3-207ENST00000398527 KRTAP9-8Q9BYQ0 159 aa4.63□□□□□ -1.67
MSL3-207ENST00000398527 KRTAP19-6Q3LI70 58 aa4.55□□□□□ -1.68
MSL3-207ENST00000398527 MT2AP02795 61 aa4.51□□□□□ -1.69
MSL3-207ENST00000398527 KRTAP9-3Q9BYQ3 159 aa4.51□□□□□ -1.69
MSL3-207ENST00000398527 MUC12Q9UKN1 5478 aa4.48□□□□□ -1.69
MSL3-207ENST00000398527 MT1FP04733 61 aa4.47□□□□□ -1.69
MSL3-207ENST00000398527 KRTAP2-2Q9BYT5 123 aa4.46□□□□□ -1.7
MSL3-207ENST00000398527 SPRR2GQ9BYE4 73 aa4.45□□□□□ -1.7
MSL3-207ENST00000398527 TNP1P09430 55 aa4.43□□□□□ -1.7
MSL3-207ENST00000398527 KRTAP10-10P60014 251 aa4.42□□□□□ -1.7
MSL3-207ENST00000398527 KRTAP2-3P0C7H8 128 aa4.35□□□□□ -1.71
MSL3-207ENST00000398527 KRTAP2-4Q9BYR9 128 aa4.35□□□□□ -1.71
MSL3-207ENST00000398527 MDN1Q9NU22 5596 aa4.32□□□□□ -1.72
MSL3-207ENST00000398527 KRTAP19-8Q3LI54 63 aa4.28□□□□□ -1.72
MSL3-207ENST00000398527 KMT2DO14686 5537 aa4.27□□□□□ -1.73
MSL3-207ENST00000398527 KRTAP5-9P26371 169 aa4.26□□□□□ -1.73
MSL3-207ENST00000398527 GPR98Q8WXG9 6306 aa4.25□□□□□ -1.73
MSL3-207ENST00000398527 LCE5AQ5TCM9 118 aa4.2□□□□□ -1.74
MSL3-207ENST00000398527 KRTAP2-1Q9BYU5 128 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms