RNA–Protein interactions for RNA: ENST00000398461.5

MEG3-202, Transcript of maternally expressed 3, humanhuman

TSL 1 (best)

Gene MEG3, Length 3,452 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEG3-202ENST00000398461 LPAP08519 4548 aa7.14□□□□□ -1.27
MEG3-202ENST00000398461 HERC1Q15751 4861 aa7.12□□□□□ -1.27
MEG3-202ENST00000398461 LRP2P98164 4655 aa7.08□□□□□ -1.28
MEG3-202ENST00000398461 KRTAP10-8P60410 259 aa7.08□□□□□ -1.28
MEG3-202ENST00000398461 MT1HL1P0DM35 61 aa7.06□□□□□ -1.28
MEG3-202ENST00000398461 UQCR11O14957 56 aa7.06□□□□□ -1.28
MEG3-202ENST00000398461 J3QL48 77 aa7.03□□□□□ -1.28
MEG3-202ENST00000398461 ASB16-AS1Q495Z4 193 aa6.99□□□□□ -1.29
MEG3-202ENST00000398461 MUC2Q02817 5179 aa6.99□□□□□ -1.29
MEG3-202ENST00000398461 KRTAP16-1A8MUX0 517 aa6.93□□□□□ -1.3
MEG3-202ENST00000398461 RPS29P62273 56 aaKnown RBP6.9□□□□□ -1.3
MEG3-202ENST00000398461 SPATA8Q6RVD6 105 aa6.86□□□□□ -1.31
MEG3-202ENST00000398461 DMAC1Q96GE9 116 aa6.86□□□□□ -1.31
MEG3-202ENST00000398461 A0A0D9SG42 100 aa6.84□□□□□ -1.31
MEG3-202ENST00000398461 RNF213Q63HN8 5207 aa6.82□□□□□ -1.32
MEG3-202ENST00000398461 SPINT4Q6UDR6 99 aa6.81□□□□□ -1.32
MEG3-202ENST00000398461 XP32Q5T750 250 aa6.8□□□□□ -1.32
MEG3-202ENST00000398461 KRTAP13-3Q3SY46 172 aa6.8□□□□□ -1.32
MEG3-202ENST00000398461 UBR4Q5T4S7 5183 aa6.77□□□□□ -1.33
MEG3-202ENST00000398461 C20orf166-AS1Q96NR2 134 aa6.74□□□□□ -1.33
MEG3-202ENST00000398461 A8MUU9 505 aa6.74□□□□□ -1.33
MEG3-202ENST00000398461 A0A1B0GU33 70 aa6.71□□□□□ -1.34
MEG3-202ENST00000398461 K7ERS5 55 aa6.71□□□□□ -1.34
MEG3-202ENST00000398461 ROMO1P60602 79 aa6.69□□□□□ -1.34
MEG3-202ENST00000398461 HMCN2Q8NDA2 5059 aa6.68□□□□□ -1.34
MEG3-202ENST00000398461 H0YAA0 97 aa6.68□□□□□ -1.34
MEG3-202ENST00000398461 KRTAP25-1Q3LHN0 102 aa6.68□□□□□ -1.34
MEG3-202ENST00000398461 RPL37P61927 97 aaKnown RBP6.67□□□□□ -1.34
MEG3-202ENST00000398461 C10orf95Q9H7T3 257 aa6.65□□□□□ -1.35
MEG3-202ENST00000398461 FAT4Q6V0I7 4981 aa6.64□□□□□ -1.35
MEG3-202ENST00000398461 TPRXLQ17RH7 258 aa6.64□□□□□ -1.35
MEG3-202ENST00000398461 NDUFAF8A1L188 74 aa6.59□□□□□ -1.35
MEG3-202ENST00000398461 P0C880 135 aa6.53□□□□□ -1.36
MEG3-202ENST00000398461 H1FX-AS1Q4G0G2 97 aa6.53□□□□□ -1.36
MEG3-202ENST00000398461 KRTAP4-1Q9BYQ7 146 aa6.52□□□□□ -1.37
MEG3-202ENST00000398461 KRTAP3-1Q9BYR8 98 aa6.52□□□□□ -1.37
MEG3-202ENST00000398461 COX6B2Q6YFQ2 88 aa6.47□□□□□ -1.37
MEG3-202ENST00000398461 MUC17Q685J3 4493 aa6.46□□□□□ -1.38
MEG3-202ENST00000398461 SEC61BP60468 96 aaKnown RBP6.46□□□□□ -1.38
MEG3-202ENST00000398461 KRTAP13-4Q3LI77 160 aa6.29□□□□□ -1.4
MEG3-202ENST00000398461 S4R3F8 94 aa6.29□□□□□ -1.4
MEG3-202ENST00000398461 KRTAP3-3Q9BYR6 98 aa6.24□□□□□ -1.41
MEG3-202ENST00000398461 M0R2T5 61 aa6.16□□□□□ -1.42
MEG3-202ENST00000398461 A0A0A0MQY5 61 aa6.16□□□□□ -1.42
MEG3-202ENST00000398461 KRTAP12-2P59991 146 aa6.15□□□□□ -1.42
MEG3-202ENST00000398461 FLGP20930 4061 aaPredicted RBP6.13□□□□□ -1.43
MEG3-202ENST00000398461 KRTAP19-2Q3LHN2 52 aa6.13□□□□□ -1.43
MEG3-202ENST00000398461 KRTAP10-6P60371 365 aaPredicted RBP6.09□□□□□ -1.43
MEG3-202ENST00000398461 LCE2CQ5TA81 110 aa6.06□□□□□ -1.44
MEG3-202ENST00000398461 LUZP6Q538Z0 58 aa6.04□□□□□ -1.44
MEG3-202ENST00000398461 KRTAP15-1Q3LI76 137 aa6.02□□□□□ -1.44
MEG3-202ENST00000398461 LORP23490 312 aaPredicted RBP6.01□□□□□ -1.45
MEG3-202ENST00000398461 M0QZ58 72 aa6□□□□□ -1.45
MEG3-202ENST00000398461 KRTAP3-2Q9BYR7 98 aa6□□□□□ -1.45
MEG3-202ENST00000398461 FSIP2Q5CZC0 6907 aa5.99□□□□□ -1.45
MEG3-202ENST00000398461 MT1HP80294 61 aa5.97□□□□□ -1.45
MEG3-202ENST00000398461 KRTAP12-1P59990 96 aa5.94□□□□□ -1.46
MEG3-202ENST00000398461 R4GN34 69 aa5.94□□□□□ -1.46
MEG3-202ENST00000398461 USH2AO75445 5202 aa5.91□□□□□ -1.46
MEG3-202ENST00000398461 PLAC4Q8WY50 150 aa5.87□□□□□ -1.47
MEG3-202ENST00000398461 CAMK2N1Q7Z7J9 78 aa5.84□□□□□ -1.47
MEG3-202ENST00000398461 KRTAP10-10P60014 251 aa5.83□□□□□ -1.48
MEG3-202ENST00000398461 MT1FP04733 61 aa5.76□□□□□ -1.49
MEG3-202ENST00000398461 MT2AP02795 61 aa5.74□□□□□ -1.49
MEG3-202ENST00000398461 KRTAP9-8Q9BYQ0 159 aa5.73□□□□□ -1.49
MEG3-202ENST00000398461 LCE2AQ5TA79 106 aaPredicted RBP5.64□□□□□ -1.51
MEG3-202ENST00000398461 KRTAP19-1Q8IUB9 90 aa5.6□□□□□ -1.51
MEG3-202ENST00000398461 KRTAP9-3Q9BYQ3 159 aa5.49□□□□□ -1.53
MEG3-202ENST00000398461 SPRR2GQ9BYE4 73 aa5.48□□□□□ -1.53
MEG3-202ENST00000398461 KMT2DO14686 5537 aa5.47□□□□□ -1.53
MEG3-202ENST00000398461 LCE2BO14633 110 aa5.45□□□□□ -1.54
MEG3-202ENST00000398461 SSPOA2VEC9 5147 aa5.39□□□□□ -1.55
MEG3-202ENST00000398461 MT1BP07438 61 aa5.38□□□□□ -1.55
MEG3-202ENST00000398461 TNP1P09430 55 aa5.35□□□□□ -1.55
MEG3-202ENST00000398461 KRTAP19-8Q3LI54 63 aa5.28□□□□□ -1.56
MEG3-202ENST00000398461 PP632Q6XCG6 107 aa5.27□□□□□ -1.57
MEG3-202ENST00000398461 MT1XP80297 61 aa5.22□□□□□ -1.57
MEG3-202ENST00000398461 KRTAP10-5P60370 271 aa5.21□□□□□ -1.57
MEG3-202ENST00000398461 KRTAP10-7P60409 375 aaPredicted RBP5.14□□□□□ -1.59
MEG3-202ENST00000398461 FCGBPQ9Y6R7 5405 aaPredicted RBP5.12□□□□□ -1.59
MEG3-202ENST00000398461 PRO2289Q9P1D8 64 aa5.08□□□□□ -1.6
MEG3-202ENST00000398461 SYNE2Q8WXH0 6885 aaKnown RBP5.06□□□□□ -1.6
MEG3-202ENST00000398461 KRTAP9-2Q9BYQ4 174 aa5.06□□□□□ -1.6
MEG3-202ENST00000398461 MACF1Q9UPN3 7388 aaKnown RBP5.06□□□□□ -1.6
MEG3-202ENST00000398461 KRTAP4-8A0A0G2JLE6 195 aa5.06□□□□□ -1.6
MEG3-202ENST00000398461 KRTAP4-8Q9BYQ9 185 aa5.06□□□□□ -1.6
MEG3-202ENST00000398461 LCE3AQ5TA76 89 aa5.04□□□□□ -1.6
MEG3-202ENST00000398461 MUC12Q9UKN1 5478 aa4.98□□□□□ -1.61
MEG3-202ENST00000398461 KRTAP10-12P60413 245 aa4.98□□□□□ -1.61
MEG3-202ENST00000398461 LCE2DQ5TA82 110 aaPredicted RBP4.95□□□□□ -1.62
MEG3-202ENST00000398461 DSTQ03001 7570 aaKnown RBP4.9□□□□□ -1.62
MEG3-202ENST00000398461 KRTAP19-6Q3LI70 58 aa4.9□□□□□ -1.63
MEG3-202ENST00000398461 CRCT1Q9UGL9 99 aa4.84□□□□□ -1.63
MEG3-202ENST00000398461 KRTAP19-5Q3LI72 72 aa4.8□□□□□ -1.64
MEG3-202ENST00000398461 SPRR5A0A1B0GTR4 108 aa4.78□□□□□ -1.64
MEG3-202ENST00000398461 KRTAP12-3P60328 96 aa4.77□□□□□ -1.65
MEG3-202ENST00000398461 MDN1Q9NU22 5596 aa4.76□□□□□ -1.65
MEG3-202ENST00000398461 KRTAP8-1Q8IUC2 63 aa4.74□□□□□ -1.65
MEG3-202ENST00000398461 OBSCNQ5VST9 7968 aa4.74□□□□□ -1.65
MEG3-202ENST00000398461 INE1O15225 51 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms