RNA–Protein interactions for RNA: ENST00000397938.6

EWSR1-206, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-206ENST00000397938 P0C880 135 aa8.91□□□□□ -0.98
EWSR1-206ENST00000397938 KRTAP3-2Q9BYR7 98 aa8.91□□□□□ -0.98
EWSR1-206ENST00000397938 A0A0D9SG42 100 aa8.89□□□□□ -0.99
EWSR1-206ENST00000397938 TPRXLQ17RH7 258 aa8.86□□□□□ -0.99
EWSR1-206ENST00000397938 FAT3Q8TDW7 4589 aa8.83□□□□□ -1
EWSR1-206ENST00000397938 A0A1B0GVY2 172 aa8.82□□□□□ -1
EWSR1-206ENST00000397938 S4R3F8 94 aa8.82□□□□□ -1
EWSR1-206ENST00000397938 DMBT1Q9UGM3 2413 aaPredicted RBP8.8□□□□□ -1
EWSR1-206ENST00000397938 KRTAP10-8P60410 259 aa8.78□□□□□ -1
EWSR1-206ENST00000397938 SPINT4Q6UDR6 99 aa8.76□□□□□ -1.01
EWSR1-206ENST00000397938 LRP1Q07954 4544 aaKnown RBP8.74□□□□□ -1.01
EWSR1-206ENST00000397938 C10orf95Q9H7T3 257 aa8.74□□□□□ -1.01
EWSR1-206ENST00000397938 HSPG2P98160 4391 aa8.73□□□□□ -1.01
EWSR1-206ENST00000397938 TNXBP22105 4242 aa8.72□□□□□ -1.01
EWSR1-206ENST00000397938 XP32Q5T750 250 aa8.69□□□□□ -1.02
EWSR1-206ENST00000397938 KRTAP12-2P59991 146 aa8.69□□□□□ -1.02
EWSR1-206ENST00000397938 KRTAP15-1Q3LI76 137 aa8.62□□□□□ -1.03
EWSR1-206ENST00000397938 KRTAP12-1P59990 96 aa8.61□□□□□ -1.03
EWSR1-206ENST00000397938 MYCBP2O75592 4640 aa8.53□□□□□ -1.04
EWSR1-206ENST00000397938 RYR2Q92736 4967 aa8.5□□□□□ -1.05
EWSR1-206ENST00000397938 NDUFAF8A1L188 74 aa8.49□□□□□ -1.05
EWSR1-206ENST00000397938 M0QZ58 72 aa8.48□□□□□ -1.05
EWSR1-206ENST00000397938 Q5VSD8 79 aa8.45□□□□□ -1.06
EWSR1-206ENST00000397938 KMT2CQ8NEZ4 4911 aaKnown RBP8.41□□□□□ -1.06
EWSR1-206ENST00000397938 LPAP08519 4548 aa8.35□□□□□ -1.07
EWSR1-206ENST00000397938 MT1HL1P0DM35 61 aa8.3□□□□□ -1.08
EWSR1-206ENST00000397938 RYR3Q15413 4870 aa8.27□□□□□ -1.09
EWSR1-206ENST00000397938 RYR1P21817 5038 aa8.24□□□□□ -1.09
EWSR1-206ENST00000397938 LRP2P98164 4655 aa8.24□□□□□ -1.09
EWSR1-206ENST00000397938 KRTAP17-1Q9BYP8 105 aa8.24□□□□□ -1.09
EWSR1-206ENST00000397938 R4GN34 69 aa8.19□□□□□ -1.1
EWSR1-206ENST00000397938 PLAC4Q8WY50 150 aa8.07□□□□□ -1.12
EWSR1-206ENST00000397938 LORP23490 312 aaPredicted RBP8.05□□□□□ -1.12
EWSR1-206ENST00000397938 KIAA1109Q2LD37 5005 aa8.02□□□□□ -1.12
EWSR1-206ENST00000397938 EPPK1P58107 5090 aaKnown RBP7.96□□□□□ -1.13
EWSR1-206ENST00000397938 MUC17Q685J3 4493 aa7.94□□□□□ -1.14
EWSR1-206ENST00000397938 PP632Q6XCG6 107 aa7.89□□□□□ -1.15
EWSR1-206ENST00000397938 SEC61BP60468 96 aaKnown RBP7.89□□□□□ -1.15
EWSR1-206ENST00000397938 ABCA13Q86UQ4 5058 aa7.88□□□□□ -1.15
EWSR1-206ENST00000397938 KRTAP4-1Q9BYQ7 146 aa7.83□□□□□ -1.16
EWSR1-206ENST00000397938 CAMK2N1Q7Z7J9 78 aa7.81□□□□□ -1.16
EWSR1-206ENST00000397938 LUZP6Q538Z0 58 aa7.76□□□□□ -1.17
EWSR1-206ENST00000397938 KRTAP19-2Q3LHN2 52 aa7.75□□□□□ -1.17
EWSR1-206ENST00000397938 BIRC6Q9NR09 4857 aa7.74□□□□□ -1.17
EWSR1-206ENST00000397938 KRTAP4-5Q9BYR2 181 aa7.68□□□□□ -1.18
EWSR1-206ENST00000397938 HERC2O95714 4834 aa7.61□□□□□ -1.19
EWSR1-206ENST00000397938 A0A0A0MQY5 61 aa7.59□□□□□ -1.19
EWSR1-206ENST00000397938 TNP1P09430 55 aa7.57□□□□□ -1.2
EWSR1-206ENST00000397938 KRTAP23-1A1A580 65 aa7.56□□□□□ -1.2
EWSR1-206ENST00000397938 FLGP20930 4061 aaPredicted RBP7.51□□□□□ -1.21
EWSR1-206ENST00000397938 SPRR5A0A1B0GTR4 108 aa7.51□□□□□ -1.21
EWSR1-206ENST00000397938 HERC1Q15751 4861 aa7.46□□□□□ -1.22
EWSR1-206ENST00000397938 J3QL48 77 aa7.45□□□□□ -1.22
EWSR1-206ENST00000397938 MUC2Q02817 5179 aa7.35□□□□□ -1.23
EWSR1-206ENST00000397938 PCLOQ9Y6V0 5065 aa7.3□□□□□ -1.24
EWSR1-206ENST00000397938 SPRR2GQ9BYE4 73 aa7.24□□□□□ -1.25
EWSR1-206ENST00000397938 KRTAP19-1Q8IUB9 90 aa7.18□□□□□ -1.26
EWSR1-206ENST00000397938 LCE3AQ5TA76 89 aa7.15□□□□□ -1.26
EWSR1-206ENST00000397938 LCE2CQ5TA81 110 aa7.13□□□□□ -1.27
EWSR1-206ENST00000397938 FAT4Q6V0I7 4981 aa7.01□□□□□ -1.29
EWSR1-206ENST00000397938 HMCN2Q8NDA2 5059 aa6.98□□□□□ -1.29
EWSR1-206ENST00000397938 KRTAP8-1Q8IUC2 63 aa6.98□□□□□ -1.29
EWSR1-206ENST00000397938 M0R2T5 61 aa6.94□□□□□ -1.3
EWSR1-206ENST00000397938 PRO2289Q9P1D8 64 aa6.92□□□□□ -1.3
EWSR1-206ENST00000397938 MT1FP04733 61 aa6.91□□□□□ -1.3
EWSR1-206ENST00000397938 MT1HP80294 61 aa6.91□□□□□ -1.3
EWSR1-206ENST00000397938 MT2AP02795 61 aa6.9□□□□□ -1.31
EWSR1-206ENST00000397938 KRTAP10-10P60014 251 aa6.88□□□□□ -1.31
EWSR1-206ENST00000397938 KRTAP19-8Q3LI54 63 aa6.86□□□□□ -1.31
EWSR1-206ENST00000397938 INE1O15225 51 aa6.84□□□□□ -1.31
EWSR1-206ENST00000397938 KRTAP10-5P60370 271 aa6.81□□□□□ -1.32
EWSR1-206ENST00000397938 KRTAP9-8Q9BYQ0 159 aa6.81□□□□□ -1.32
EWSR1-206ENST00000397938 UBR4Q5T4S7 5183 aa6.79□□□□□ -1.32
EWSR1-206ENST00000397938 MT1XP80297 61 aa6.79□□□□□ -1.32
EWSR1-206ENST00000397938 KRTAP12-3P60328 96 aa6.78□□□□□ -1.32
EWSR1-206ENST00000397938 MT1BP07438 61 aa6.76□□□□□ -1.33
EWSR1-206ENST00000397938 KRTAP10-12P60413 245 aa6.75□□□□□ -1.33
EWSR1-206ENST00000397938 RNF213Q63HN8 5207 aa6.7□□□□□ -1.34
EWSR1-206ENST00000397938 KRTAP10-7P60409 375 aaPredicted RBP6.63□□□□□ -1.35
EWSR1-206ENST00000397938 KRTAP9-3Q9BYQ3 159 aa6.5□□□□□ -1.37
EWSR1-206ENST00000397938 LCE3CQ5T5A8 94 aa6.41□□□□□ -1.38
EWSR1-206ENST00000397938 KRTAP19-5Q3LI72 72 aa6.4□□□□□ -1.38
EWSR1-206ENST00000397938 KRTAP9-6A8MVA2 160 aa6.22□□□□□ -1.41
EWSR1-206ENST00000397938 LCE2BO14633 110 aa6.19□□□□□ -1.42
EWSR1-206ENST00000397938 LCE2AQ5TA79 106 aaPredicted RBP6.17□□□□□ -1.42
EWSR1-206ENST00000397938 KMT2DO14686 5537 aa6.13□□□□□ -1.43
EWSR1-206ENST00000397938 KRTAP4-8A0A0G2JLE6 195 aa6.13□□□□□ -1.43
EWSR1-206ENST00000397938 KRTAP4-8Q9BYQ9 185 aa6.13□□□□□ -1.43
EWSR1-206ENST00000397938 KRTAP2-3P0C7H8 128 aa6.12□□□□□ -1.43
EWSR1-206ENST00000397938 KRTAP2-4Q9BYR9 128 aa6.12□□□□□ -1.43
EWSR1-206ENST00000397938 KRTAP2-1Q9BYU5 128 aa6.12□□□□□ -1.43
EWSR1-206ENST00000397938 KRTAP19-7Q3SYF9 63 aa6.05□□□□□ -1.44
EWSR1-206ENST00000397938 USH2AO75445 5202 aa6.02□□□□□ -1.45
EWSR1-206ENST00000397938 KRTAP4-7Q9BYR0 210 aa6.02□□□□□ -1.45
EWSR1-206ENST00000397938 KRTAP19-4Q3LI73 84 aa5.95□□□□□ -1.46
EWSR1-206ENST00000397938 MT1LQ93083 61 aa5.9□□□□□ -1.47
EWSR1-206ENST00000397938 MT1EP04732 61 aa5.85□□□□□ -1.47
EWSR1-206ENST00000397938 LCE2DQ5TA82 110 aaPredicted RBP5.66□□□□□ -1.5
EWSR1-206ENST00000397938 SSPOA2VEC9 5147 aa5.61□□□□□ -1.51
EWSR1-206ENST00000397938 LOC100996750A0A140TA64 210 aa5.59□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms