RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 WFDC10BQ8IUB3 73 aa3.45□□□□□ -1.86
SMCO1-201ENST00000397537 MUC2Q02817 5179 aa3.44□□□□□ -1.86
SMCO1-201ENST00000397537 PCOTHQ58A44 107 aa3.44□□□□□ -1.86
SMCO1-201ENST00000397537 MINOS1Q5TGZ0 78 aa3.44□□□□□ -1.86
SMCO1-201ENST00000397537 KRTAP5-11Q6L8G4 156 aa3.44□□□□□ -1.86
SMCO1-201ENST00000397537 SSBP3-AS1Q7Z2R9 100 aa3.44□□□□□ -1.86
SMCO1-201ENST00000397537 LRP1BQ9NZR2 4599 aa3.43□□□□□ -1.86
SMCO1-201ENST00000397537 C6orf48Q9UBA6 75 aa3.43□□□□□ -1.86
SMCO1-201ENST00000397537 FLG2Q5D862 2391 aaPredicted RBP3.43□□□□□ -1.86
SMCO1-201ENST00000397537 FAT4Q6V0I7 4981 aa3.43□□□□□ -1.86
SMCO1-201ENST00000397537 KLK9Q2XQG4 91 aa3.42□□□□□ -1.86
SMCO1-201ENST00000397537 APELAP0DMC3 54 aa3.42□□□□□ -1.86
SMCO1-201ENST00000397537 IGFL1Q6UW32 110 aa3.42□□□□□ -1.86
SMCO1-201ENST00000397537 KAAG1Q9UBP8 84 aa3.41□□□□□ -1.86
SMCO1-201ENST00000397537 DNAH5Q8TE73 4624 aa3.4□□□□□ -1.86
SMCO1-201ENST00000397537 KRTAP10-7P60409 375 aaPredicted RBP3.38□□□□□ -1.87
SMCO1-201ENST00000397537 H3BUX3 64 aa3.37□□□□□ -1.87
SMCO1-201ENST00000397537 KRTAP1-5Q9BYS1 174 aa3.37□□□□□ -1.87
SMCO1-201ENST00000397537 FAT1Q14517 4588 aa3.37□□□□□ -1.87
SMCO1-201ENST00000397537 VPS13BQ7Z7G8 4022 aa3.37□□□□□ -1.87
SMCO1-201ENST00000397537 A8MTW9 85 aa3.36□□□□□ -1.87
SMCO1-201ENST00000397537 DEFB131AP59861 70 aa3.36□□□□□ -1.87
SMCO1-201ENST00000397537 LRP2P98164 4655 aa3.32□□□□□ -1.88
SMCO1-201ENST00000397537 GVQW2A0A096LPI5 108 aaPredicted RBP3.32□□□□□ -1.88
SMCO1-201ENST00000397537 MMP24-AS1A0A0U1RRL7 71 aa3.32□□□□□ -1.88
SMCO1-201ENST00000397537 C10orf99Q6UWK7 81 aa3.32□□□□□ -1.88
SMCO1-201ENST00000397537 G3V318 75 aa3.29□□□□□ -1.88
SMCO1-201ENST00000397537 KRTAP5-9P26371 169 aa3.29□□□□□ -1.88
SMCO1-201ENST00000397537 MRPL34Q9BQ48 92 aaKnown RBP3.28□□□□□ -1.88
SMCO1-201ENST00000397537 Q6ZRX8 168 aa3.28□□□□□ -1.88
SMCO1-201ENST00000397537 CRIPTQ9P021 101 aa3.28□□□□□ -1.88
SMCO1-201ENST00000397537 PKHD1L1Q86WI1 4243 aa3.27□□□□□ -1.89
SMCO1-201ENST00000397537 FSIP2Q5CZC0 6907 aa3.27□□□□□ -1.89
SMCO1-201ENST00000397537 DEFB105AQ8NG35 78 aa3.27□□□□□ -1.89
SMCO1-201ENST00000397537 KRTAP10-6P60371 365 aaPredicted RBP3.26□□□□□ -1.89
SMCO1-201ENST00000397537 Q5VSD8 79 aa3.26□□□□□ -1.89
SMCO1-201ENST00000397537 COX6B2Q6YFQ2 88 aa3.26□□□□□ -1.89
SMCO1-201ENST00000397537 H0YAA0 97 aa3.26□□□□□ -1.89
SMCO1-201ENST00000397537 DEFB136Q30KP8 78 aa3.26□□□□□ -1.89
SMCO1-201ENST00000397537 LCE3CQ5T5A8 94 aa3.26□□□□□ -1.89
SMCO1-201ENST00000397537 CRCT1Q9UGL9 99 aa3.26□□□□□ -1.89
SMCO1-201ENST00000397537 SPINK13Q1W4C9 94 aa3.25□□□□□ -1.89
SMCO1-201ENST00000397537 CLPSL2Q6UWE3 100 aa3.24□□□□□ -1.89
SMCO1-201ENST00000397537 PLAC4Q8WY50 150 aa3.24□□□□□ -1.89
SMCO1-201ENST00000397537 RHPN1-AS1Q9BWJ2 59 aa3.23□□□□□ -1.89
SMCO1-201ENST00000397537 LRP1Q07954 4544 aaKnown RBP3.23□□□□□ -1.89
SMCO1-201ENST00000397537 H3BUA1 57 aa3.23□□□□□ -1.89
SMCO1-201ENST00000397537 DEFB1P60022 68 aa3.23□□□□□ -1.89
SMCO1-201ENST00000397537 USMG5Q96IX5 58 aa3.22□□□□□ -1.89
SMCO1-201ENST00000397537 APLNQ9ULZ1 77 aa3.21□□□□□ -1.89
SMCO1-201ENST00000397537 FAT3Q8TDW7 4589 aa3.21□□□□□ -1.9
SMCO1-201ENST00000397537 KRTAP5-4Q6L8H1 288 aa3.2□□□□□ -1.9
SMCO1-201ENST00000397537 PP632Q6XCG6 107 aa3.19□□□□□ -1.9
SMCO1-201ENST00000397537 Q6ZSA8 131 aa3.19□□□□□ -1.9
SMCO1-201ENST00000397537 KRTAP10-12P60413 245 aa3.19□□□□□ -1.9
SMCO1-201ENST00000397537 KRTAP5-1Q6L8H4 278 aa3.19□□□□□ -1.9
SMCO1-201ENST00000397537 KRTAP13-4Q3LI77 160 aa3.18□□□□□ -1.9
SMCO1-201ENST00000397537 H1FX-AS1Q4G0G2 97 aa3.18□□□□□ -1.9
SMCO1-201ENST00000397537 UNQ6190/PRO20217Q6UXQ8 127 aa3.18□□□□□ -1.9
SMCO1-201ENST00000397537 LELP1Q5T871 98 aa3.17□□□□□ -1.9
SMCO1-201ENST00000397537 HTN1P15515 57 aa3.16□□□□□ -1.9
SMCO1-201ENST00000397537 SPRR1AP35321 89 aa3.16□□□□□ -1.9
SMCO1-201ENST00000397537 KRTAP10-1P60331 282 aa3.16□□□□□ -1.9
SMCO1-201ENST00000397537 SPRR5A0A1B0GTR4 108 aa3.15□□□□□ -1.91
SMCO1-201ENST00000397537 SMR3BP02814 79 aaPredicted RBP3.15□□□□□ -1.91
SMCO1-201ENST00000397537 KRTAP13-3Q3SY46 172 aa3.15□□□□□ -1.91
SMCO1-201ENST00000397537 TNXBP22105 4242 aa3.14□□□□□ -1.91
SMCO1-201ENST00000397537 RPL37P61927 97 aaKnown RBP3.14□□□□□ -1.91
SMCO1-201ENST00000397537 DEFB130BP0DP73 79 aa3.12□□□□□ -1.91
SMCO1-201ENST00000397537 DEFB130AP0DP74 79 aa3.12□□□□□ -1.91
SMCO1-201ENST00000397537 KRTAP4-4Q9BYR3 166 aa3.11□□□□□ -1.91
SMCO1-201ENST00000397537 KRTAP12-2P59991 146 aa3.1□□□□□ -1.91
SMCO1-201ENST00000397537 UBE2DNLQ8IWF7 75 aa3.1□□□□□ -1.91
SMCO1-201ENST00000397537 SPRR1BP22528 89 aa3.08□□□□□ -1.92
SMCO1-201ENST00000397537 DEFB135Q30KP9 77 aa3.08□□□□□ -1.92
SMCO1-201ENST00000397537 LCE1EQ5T753 118 aa3.08□□□□□ -1.92
SMCO1-201ENST00000397537 C10orf95Q9H7T3 257 aa3.07□□□□□ -1.92
SMCO1-201ENST00000397537 HMCN1Q96RW7 5635 aa3.05□□□□□ -1.92
SMCO1-201ENST00000397537 DNAH8Q96JB1 4490 aa3.04□□□□□ -1.92
SMCO1-201ENST00000397537 PRLHP81277 87 aa3.04□□□□□ -1.92
SMCO1-201ENST00000397537 MT1HL1P0DM35 61 aa3.03□□□□□ -1.92
SMCO1-201ENST00000397537 DEFB4AO15263 64 aa3.03□□□□□ -1.93
SMCO1-201ENST00000397537 NOP10Q9NPE3 64 aaKnown RBP3.02□□□□□ -1.93
SMCO1-201ENST00000397537 LPAP08519 4548 aa3.01□□□□□ -1.93
SMCO1-201ENST00000397537 LCE3EQ5T5B0 92 aa3□□□□□ -1.93
SMCO1-201ENST00000397537 KRTAP10-4P60372 401 aaPredicted RBP2.99□□□□□ -1.93
SMCO1-201ENST00000397537 PRO0255Q9UI72 69 aa2.99□□□□□ -1.93
SMCO1-201ENST00000397537 SPINK1P00995 79 aa2.97□□□□□ -1.93
SMCO1-201ENST00000397537 SSPOA2VEC9 5147 aa2.94□□□□□ -1.94
SMCO1-201ENST00000397537 KRTAP12-1P59990 96 aa2.94□□□□□ -1.94
SMCO1-201ENST00000397537 S4R3F8 94 aa2.91□□□□□ -1.94
SMCO1-201ENST00000397537 KRTAP10-10P60014 251 aa2.89□□□□□ -1.95
SMCO1-201ENST00000397537 SYNE2Q8WXH0 6885 aaKnown RBP2.87□□□□□ -1.95
SMCO1-201ENST00000397537 HTN3P15516 51 aa2.86□□□□□ -1.95
SMCO1-201ENST00000397537 SPART-AS1P0CW21 52 aa2.86□□□□□ -1.95
SMCO1-201ENST00000397537 KRTAP6-3Q3LI67 103 aa2.86□□□□□ -1.95
SMCO1-201ENST00000397537 A0A096LPF7 62 aa2.84□□□□□ -1.96
SMCO1-201ENST00000397537 USH2AO75445 5202 aa2.83□□□□□ -1.96
SMCO1-201ENST00000397537 NEBP20929 6669 aa2.83□□□□□ -1.96
SMCO1-201ENST00000397537 FCGBPQ9Y6R7 5405 aaPredicted RBP2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 327.5 ms