RNA–Protein interactions for RNA: ENST00000397108.8

FGFR1-208, Transcript of fibroblast growth factor receptor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene FGFR1, Length 2,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-208ENST00000397108 J3QL48 77 aa6.56□□□□□ -1.36
FGFR1-208ENST00000397108 FAT3Q8TDW7 4589 aa6.56□□□□□ -1.36
FGFR1-208ENST00000397108 LRP1Q07954 4544 aaKnown RBP6.56□□□□□ -1.36
FGFR1-208ENST00000397108 KRTAP16-1A8MUX0 517 aa6.54□□□□□ -1.36
FGFR1-208ENST00000397108 TYMSOSQ8TAI1 123 aa6.53□□□□□ -1.36
FGFR1-208ENST00000397108 MT1HL1P0DM35 61 aa6.51□□□□□ -1.37
FGFR1-208ENST00000397108 SSBP3-AS1Q7Z2R9 100 aa6.5□□□□□ -1.37
FGFR1-208ENST00000397108 HERC1Q15751 4861 aa6.48□□□□□ -1.37
FGFR1-208ENST00000397108 P0C880 135 aa6.47□□□□□ -1.37
FGFR1-208ENST00000397108 KRTAP1-4P0C5Y4 121 aa6.47□□□□□ -1.37
FGFR1-208ENST00000397108 A0A1B0GU33 70 aa6.46□□□□□ -1.38
FGFR1-208ENST00000397108 KRTAP10-8P60410 259 aa6.46□□□□□ -1.38
FGFR1-208ENST00000397108 TNXBP22105 4242 aa6.46□□□□□ -1.38
FGFR1-208ENST00000397108 KRTAP13-2Q52LG2 175 aa6.46□□□□□ -1.38
FGFR1-208ENST00000397108 H1FX-AS1Q4G0G2 97 aa6.39□□□□□ -1.39
FGFR1-208ENST00000397108 SPINT4Q6UDR6 99 aa6.33□□□□□ -1.4
FGFR1-208ENST00000397108 K7ERS5 55 aa6.32□□□□□ -1.4
FGFR1-208ENST00000397108 KRTAP3-1Q9BYR8 98 aa6.32□□□□□ -1.4
FGFR1-208ENST00000397108 HMCN2Q8NDA2 5059 aa6.31□□□□□ -1.4
FGFR1-208ENST00000397108 COX6B2Q6YFQ2 88 aa6.28□□□□□ -1.4
FGFR1-208ENST00000397108 C9orf92A6NGG3 77 aa6.27□□□□□ -1.41
FGFR1-208ENST00000397108 C10orf95Q9H7T3 257 aa6.26□□□□□ -1.41
FGFR1-208ENST00000397108 A0A0D9SG42 100 aa6.25□□□□□ -1.41
FGFR1-208ENST00000397108 NDUFAF8A1L188 74 aa6.25□□□□□ -1.41
FGFR1-208ENST00000397108 TPRXLQ17RH7 258 aa6.25□□□□□ -1.41
FGFR1-208ENST00000397108 RPS29P62273 56 aaKnown RBP6.16□□□□□ -1.42
FGFR1-208ENST00000397108 RPL37P61927 97 aaKnown RBP6.16□□□□□ -1.42
FGFR1-208ENST00000397108 KRTAP13-4Q3LI77 160 aa6.15□□□□□ -1.42
FGFR1-208ENST00000397108 C20orf166-AS1Q96NR2 134 aa6.15□□□□□ -1.43
FGFR1-208ENST00000397108 LRP2P98164 4655 aa6.14□□□□□ -1.43
FGFR1-208ENST00000397108 KRTAP15-1Q3LI76 137 aa6.11□□□□□ -1.43
FGFR1-208ENST00000397108 UBR4Q5T4S7 5183 aa6.11□□□□□ -1.43
FGFR1-208ENST00000397108 LPAP08519 4548 aa6.09□□□□□ -1.43
FGFR1-208ENST00000397108 KRTAP10-6P60371 365 aaPredicted RBP6.08□□□□□ -1.44
FGFR1-208ENST00000397108 KRTAP3-3Q9BYR6 98 aa5.99□□□□□ -1.45
FGFR1-208ENST00000397108 KRTAP3-2Q9BYR7 98 aa5.99□□□□□ -1.45
FGFR1-208ENST00000397108 KRTAP12-2P59991 146 aa5.99□□□□□ -1.45
FGFR1-208ENST00000397108 S4R3F8 94 aa5.98□□□□□ -1.45
FGFR1-208ENST00000397108 RNF213Q63HN8 5207 aa5.96□□□□□ -1.46
FGFR1-208ENST00000397108 A0A0A0MQY5 61 aa5.93□□□□□ -1.46
FGFR1-208ENST00000397108 XP32Q5T750 250 aa5.91□□□□□ -1.46
FGFR1-208ENST00000397108 MUC17Q685J3 4493 aa5.88□□□□□ -1.47
FGFR1-208ENST00000397108 SEC61BP60468 96 aaKnown RBP5.87□□□□□ -1.47
FGFR1-208ENST00000397108 KRTAP12-1P59990 96 aa5.85□□□□□ -1.47
FGFR1-208ENST00000397108 MUC2Q02817 5179 aa5.83□□□□□ -1.48
FGFR1-208ENST00000397108 KRTAP4-1Q9BYQ7 146 aa5.77□□□□□ -1.49
FGFR1-208ENST00000397108 LUZP6Q538Z0 58 aa5.75□□□□□ -1.49
FGFR1-208ENST00000397108 FAT4Q6V0I7 4981 aa5.69□□□□□ -1.5
FGFR1-208ENST00000397108 PLAC4Q8WY50 150 aa5.68□□□□□ -1.5
FGFR1-208ENST00000397108 LCE2AQ5TA79 106 aaPredicted RBP5.64□□□□□ -1.51
FGFR1-208ENST00000397108 KRTAP19-2Q3LHN2 52 aa5.62□□□□□ -1.51
FGFR1-208ENST00000397108 M0QZ58 72 aa5.61□□□□□ -1.51
FGFR1-208ENST00000397108 LCE2CQ5TA81 110 aa5.6□□□□□ -1.51
FGFR1-208ENST00000397108 MT1HP80294 61 aa5.52□□□□□ -1.53
FGFR1-208ENST00000397108 R4GN34 69 aa5.52□□□□□ -1.53
FGFR1-208ENST00000397108 FLGP20930 4061 aaPredicted RBP5.47□□□□□ -1.53
FGFR1-208ENST00000397108 LORP23490 312 aaPredicted RBP5.45□□□□□ -1.54
FGFR1-208ENST00000397108 M0R2T5 61 aa5.41□□□□□ -1.54
FGFR1-208ENST00000397108 KRTAP9-2Q9BYQ4 174 aa5.34□□□□□ -1.56
FGFR1-208ENST00000397108 CAMK2N1Q7Z7J9 78 aa5.32□□□□□ -1.56
FGFR1-208ENST00000397108 LCE2DQ5TA82 110 aaPredicted RBP5.3□□□□□ -1.56
FGFR1-208ENST00000397108 PP632Q6XCG6 107 aa5.28□□□□□ -1.56
FGFR1-208ENST00000397108 KRTAP9-8Q9BYQ0 159 aa5.25□□□□□ -1.57
FGFR1-208ENST00000397108 MT2AP02795 61 aa5.19□□□□□ -1.58
FGFR1-208ENST00000397108 MT1FP04733 61 aa5.15□□□□□ -1.59
FGFR1-208ENST00000397108 KRTAP10-10P60014 251 aa5.12□□□□□ -1.59
FGFR1-208ENST00000397108 KRTAP9-6A0A140TA67 174 aa5.1□□□□□ -1.59
FGFR1-208ENST00000397108 TNP1P09430 55 aa5.09□□□□□ -1.59
FGFR1-208ENST00000397108 SPRR5A0A1B0GTR4 108 aa5.09□□□□□ -1.6
FGFR1-208ENST00000397108 KRTAP9-3Q9BYQ3 159 aa5.08□□□□□ -1.6
FGFR1-208ENST00000397108 CRCT1Q9UGL9 99 aa5.07□□□□□ -1.6
FGFR1-208ENST00000397108 FSIP2Q5CZC0 6907 aa5.06□□□□□ -1.6
FGFR1-208ENST00000397108 LCE2BO14633 110 aa5.01□□□□□ -1.61
FGFR1-208ENST00000397108 USH2AO75445 5202 aa4.99□□□□□ -1.61
FGFR1-208ENST00000397108 PRO2289Q9P1D8 64 aa4.98□□□□□ -1.61
FGFR1-208ENST00000397108 SSPOA2VEC9 5147 aa4.91□□□□□ -1.62
FGFR1-208ENST00000397108 KRTAP23-1A1A580 65 aa4.9□□□□□ -1.62
FGFR1-208ENST00000397108 KRTAP19-1Q8IUB9 90 aa4.89□□□□□ -1.63
FGFR1-208ENST00000397108 SPRR2GQ9BYE4 73 aa4.86□□□□□ -1.63
FGFR1-208ENST00000397108 LCE3AQ5TA76 89 aa4.84□□□□□ -1.63
FGFR1-208ENST00000397108 KRTAP19-6Q3LI70 58 aa4.83□□□□□ -1.64
FGFR1-208ENST00000397108 KRTAP19-8Q3LI54 63 aa4.81□□□□□ -1.64
FGFR1-208ENST00000397108 FCGBPQ9Y6R7 5405 aaPredicted RBP4.79□□□□□ -1.64
FGFR1-208ENST00000397108 INE1O15225 51 aa4.79□□□□□ -1.64
FGFR1-208ENST00000397108 MT1BP07438 61 aa4.77□□□□□ -1.65
FGFR1-208ENST00000397108 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.72□□□□□ -1.65
FGFR1-208ENST00000397108 KRTAP10-5P60370 271 aa4.63□□□□□ -1.67
FGFR1-208ENST00000397108 KRTAP9-7A8MTY7 169 aa4.6□□□□□ -1.67
FGFR1-208ENST00000397108 MACF1Q9UPN3 7388 aaKnown RBP4.59□□□□□ -1.67
FGFR1-208ENST00000397108 KRTAP8-1Q8IUC2 63 aa4.59□□□□□ -1.68
FGFR1-208ENST00000397108 KRTAP12-3P60328 96 aa4.55□□□□□ -1.68
FGFR1-208ENST00000397108 MT1XP80297 61 aa4.52□□□□□ -1.69
FGFR1-208ENST00000397108 SYNE2Q8WXH0 6885 aaKnown RBP4.52□□□□□ -1.69
FGFR1-208ENST00000397108 KRTAP10-12P60413 245 aa4.51□□□□□ -1.69
FGFR1-208ENST00000397108 KMT2DO14686 5537 aa4.51□□□□□ -1.69
FGFR1-208ENST00000397108 KRTAP6-3Q3LI67 103 aa4.47□□□□□ -1.69
FGFR1-208ENST00000397108 KRTAP10-7P60409 375 aaPredicted RBP4.39□□□□□ -1.71
FGFR1-208ENST00000397108 KRTAP5-9P26371 169 aa4.35□□□□□ -1.71
FGFR1-208ENST00000397108 LCE3CQ5T5A8 94 aa4.28□□□□□ -1.72
FGFR1-208ENST00000397108 KRTAP19-5Q3LI72 72 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms