RNA–Protein interactions for RNA: ENST00000396859.5

GAPDH-204, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-204ENST00000396859 SERP2Q8N6R1 65 aa6.53□□□□□ -1.36
GAPDH-204ENST00000396859 KRTAP10-10P60014 251 aa6.52□□□□□ -1.37
GAPDH-204ENST00000396859 NDUFC1O43677 76 aa6.47□□□□□ -1.37
GAPDH-204ENST00000396859 MT1FP04733 61 aa6.47□□□□□ -1.37
GAPDH-204ENST00000396859 C20orf197Q8N268 126 aa6.47□□□□□ -1.37
GAPDH-204ENST00000396859 SNURFQ9Y675 71 aa6.47□□□□□ -1.37
GAPDH-204ENST00000396859 DMAC1Q96GE9 116 aa6.45□□□□□ -1.38
GAPDH-204ENST00000396859 COX7CP15954 63 aa6.41□□□□□ -1.38
GAPDH-204ENST00000396859 ACYP2P14621 99 aa6.39□□□□□ -1.39
GAPDH-204ENST00000396859 LCE2BO14633 110 aa6.38□□□□□ -1.39
GAPDH-204ENST00000396859 SPANXA2-OT1Q8N9U9 137 aa6.36□□□□□ -1.39
GAPDH-204ENST00000396859 ANAPC13Q9BS18 74 aa6.36□□□□□ -1.39
GAPDH-204ENST00000396859 KRTAP9-3Q9BYQ3 159 aa6.36□□□□□ -1.39
GAPDH-204ENST00000396859 CHKB-CPT1BH3BT56 60 aa6.31□□□□□ -1.4
GAPDH-204ENST00000396859 SPTSSBQ8NFR3 76 aa6.31□□□□□ -1.4
GAPDH-204ENST00000396859 H0YAA0 97 aa6.29□□□□□ -1.4
GAPDH-204ENST00000396859 ADM2Q7Z4H4 148 aa6.24□□□□□ -1.41
GAPDH-204ENST00000396859 CRIPTQ9P021 101 aa6.23□□□□□ -1.41
GAPDH-204ENST00000396859 H7BZZ5 65 aa6.21□□□□□ -1.42
GAPDH-204ENST00000396859 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.2□□□□□ -1.42
GAPDH-204ENST00000396859 KRTAP9-7A8MTY7 169 aa6.18□□□□□ -1.42
GAPDH-204ENST00000396859 CYSTM1Q9H1C7 97 aa6.18□□□□□ -1.42
GAPDH-204ENST00000396859 CCDC179H3BU77 68 aa6.17□□□□□ -1.42
GAPDH-204ENST00000396859 COA5Q86WW8 74 aa6.16□□□□□ -1.42
GAPDH-204ENST00000396859 KRTAP19-1Q8IUB9 90 aa6.16□□□□□ -1.42
GAPDH-204ENST00000396859 SPRR2GQ9BYE4 73 aa6.16□□□□□ -1.42
GAPDH-204ENST00000396859 SSPOA2VEC9 5147 aa6.13□□□□□ -1.43
GAPDH-204ENST00000396859 Q5VV11 94 aa6.11□□□□□ -1.43
GAPDH-204ENST00000396859 USH2AO75445 5202 aa6.1□□□□□ -1.43
GAPDH-204ENST00000396859 P0C880 135 aa6.1□□□□□ -1.43
GAPDH-204ENST00000396859 R4GN34 69 aa6.09□□□□□ -1.43
GAPDH-204ENST00000396859 ATP5EP56381 51 aaPredicted RBP6.08□□□□□ -1.44
GAPDH-204ENST00000396859 KRTAP19-8Q3LI54 63 aa6.06□□□□□ -1.44
GAPDH-204ENST00000396859 M0QZ58 72 aa6.04□□□□□ -1.44
GAPDH-204ENST00000396859 FCGBPQ9Y6R7 5405 aaPredicted RBP6.04□□□□□ -1.44
GAPDH-204ENST00000396859 SEC61GP60059 68 aa6.03□□□□□ -1.44
GAPDH-204ENST00000396859 KRTAP19-6Q3LI70 58 aa6.02□□□□□ -1.45
GAPDH-204ENST00000396859 MT1BP07438 61 aa6.01□□□□□ -1.45
GAPDH-204ENST00000396859 TMEM258P61165 79 aa6□□□□□ -1.45
GAPDH-204ENST00000396859 SERP1Q9Y6X1 66 aa5.99□□□□□ -1.45
GAPDH-204ENST00000396859 MACF1Q9UPN3 7388 aaKnown RBP5.97□□□□□ -1.45
GAPDH-204ENST00000396859 SYNE2Q8WXH0 6885 aaKnown RBP5.95□□□□□ -1.46
GAPDH-204ENST00000396859 LINC01554Q52M75 96 aa5.95□□□□□ -1.46
GAPDH-204ENST00000396859 PLAC4Q8WY50 150 aa5.94□□□□□ -1.46
GAPDH-204ENST00000396859 A6NN06 94 aa5.9□□□□□ -1.46
GAPDH-204ENST00000396859 A0A1B0GU69 56 aa5.87□□□□□ -1.47
GAPDH-204ENST00000396859 KRTAP10-5P60370 271 aa5.84□□□□□ -1.47
GAPDH-204ENST00000396859 A0A1B0GU33 70 aa5.83□□□□□ -1.48
GAPDH-204ENST00000396859 PRR15LQ9BU68 103 aa5.82□□□□□ -1.48
GAPDH-204ENST00000396859 PRO2289Q9P1D8 64 aa5.82□□□□□ -1.48
GAPDH-204ENST00000396859 KRTAP13-4Q3LI77 160 aa5.79□□□□□ -1.48
GAPDH-204ENST00000396859 PCP4P48539 62 aa5.78□□□□□ -1.48
GAPDH-204ENST00000396859 LINC01558Q9Y6Z2 57 aa5.75□□□□□ -1.49
GAPDH-204ENST00000396859 SPATA8Q6RVD6 105 aa5.74□□□□□ -1.49
GAPDH-204ENST00000396859 A0A0D9SG42 100 aa5.72□□□□□ -1.49
GAPDH-204ENST00000396859 MT1XP80297 61 aa5.71□□□□□ -1.5
GAPDH-204ENST00000396859 SMIM26A0A096LP01 95 aa5.7□□□□□ -1.5
GAPDH-204ENST00000396859 CAMK2N1Q7Z7J9 78 aa5.67□□□□□ -1.5
GAPDH-204ENST00000396859 V9GYY9 64 aa5.66□□□□□ -1.5
GAPDH-204ENST00000396859 SPINT4Q6UDR6 99 aa5.64□□□□□ -1.51
GAPDH-204ENST00000396859 NEBP20929 6669 aa5.64□□□□□ -1.51
GAPDH-204ENST00000396859 UQCR11O14957 56 aa5.6□□□□□ -1.51
GAPDH-204ENST00000396859 KRTAP6-3Q3LI67 103 aa5.6□□□□□ -1.51
GAPDH-204ENST00000396859 Q1T7F1 81 aa5.58□□□□□ -1.52
GAPDH-204ENST00000396859 A8MU10 97 aa5.57□□□□□ -1.52
GAPDH-204ENST00000396859 KRTAP12-1P59990 96 aa5.57□□□□□ -1.52
GAPDH-204ENST00000396859 RPS28P62857 69 aaKnown RBP5.56□□□□□ -1.52
GAPDH-204ENST00000396859 KRTAP12-2P59991 146 aa5.54□□□□□ -1.52
GAPDH-204ENST00000396859 PSPHP1O15172 72 aa5.53□□□□□ -1.52
GAPDH-204ENST00000396859 MIR22HGQ0VDD5 57 aa5.49□□□□□ -1.53
GAPDH-204ENST00000396859 MUC12Q9UKN1 5478 aa5.45□□□□□ -1.54
GAPDH-204ENST00000396859 KRTAP10-7P60409 375 aaPredicted RBP5.45□□□□□ -1.54
GAPDH-204ENST00000396859 KRTAP10-12P60413 245 aa5.43□□□□□ -1.54
GAPDH-204ENST00000396859 KRTAP8-1Q8IUC2 63 aa5.43□□□□□ -1.54
GAPDH-204ENST00000396859 A6NED7 52 aa5.4□□□□□ -1.54
GAPDH-204ENST00000396859 K7ERS5 55 aa5.4□□□□□ -1.54
GAPDH-204ENST00000396859 KRTAP5-9P26371 169 aa5.38□□□□□ -1.55
GAPDH-204ENST00000396859 LOC100996750A0A140TA64 210 aa5.37□□□□□ -1.55
GAPDH-204ENST00000396859 SVIPQ8NHG7 77 aa5.37□□□□□ -1.55
GAPDH-204ENST00000396859 KRTAP4-6Q9BYQ5 205 aa5.37□□□□□ -1.55
GAPDH-204ENST00000396859 KRTAP4-8A0A0G2JLE6 195 aa5.36□□□□□ -1.55
GAPDH-204ENST00000396859 KRTAP4-8Q9BYQ9 185 aa5.36□□□□□ -1.55
GAPDH-204ENST00000396859 KRTAP20-1Q3LI63 56 aa5.34□□□□□ -1.55
GAPDH-204ENST00000396859 SPRR2FQ96RM1 72 aa5.34□□□□□ -1.55
GAPDH-204ENST00000396859 TNP1P09430 55 aa5.29□□□□□ -1.56
GAPDH-204ENST00000396859 C10orf95Q9H7T3 257 aa5.28□□□□□ -1.56
GAPDH-204ENST00000396859 KMT2DO14686 5537 aa5.28□□□□□ -1.56
GAPDH-204ENST00000396859 MDN1Q9NU22 5596 aa5.22□□□□□ -1.57
GAPDH-204ENST00000396859 SPRR2EP22531 72 aa5.2□□□□□ -1.58
GAPDH-204ENST00000396859 SPRR2BP35325 72 aa5.2□□□□□ -1.58
GAPDH-204ENST00000396859 SPRR2AP35326 72 aa5.2□□□□□ -1.58
GAPDH-204ENST00000396859 CDC42SE1Q9NRR8 79 aa5.19□□□□□ -1.58
GAPDH-204ENST00000396859 KRTAP25-1Q3LHN0 102 aa5.13□□□□□ -1.59
GAPDH-204ENST00000396859 LCE1AQ5T7P2 110 aa5.12□□□□□ -1.59
GAPDH-204ENST00000396859 LCE3AQ5TA76 89 aa5.11□□□□□ -1.59
GAPDH-204ENST00000396859 KRTAP19-7Q3SYF9 63 aa5.08□□□□□ -1.6
GAPDH-204ENST00000396859 KRTAP2-3P0C7H8 128 aa5.07□□□□□ -1.6
GAPDH-204ENST00000396859 KRTAP19-5Q3LI72 72 aa5.07□□□□□ -1.6
GAPDH-204ENST00000396859 KRTAP2-4Q9BYR9 128 aa5.07□□□□□ -1.6
GAPDH-204ENST00000396859 MT1EP04732 61 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms