RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 PRO2289Q9P1D8 64 aa3.54□□□□□ -1.84
SCFD1-202ENST00000396629 K7EQZ3 153 aa3.54□□□□□ -1.84
SCFD1-202ENST00000396629 MT1XP80297 61 aa3.54□□□□□ -1.84
SCFD1-202ENST00000396629 NREPQ16612 68 aa3.54□□□□□ -1.84
SCFD1-202ENST00000396629 KRTAP12-2P59991 146 aa3.53□□□□□ -1.84
SCFD1-202ENST00000396629 JMJD7-PLA2G4BH0Y9G9 81 aa3.53□□□□□ -1.84
SCFD1-202ENST00000396629 PDE6GP18545 87 aa3.53□□□□□ -1.84
SCFD1-202ENST00000396629 C1orf64Q8NEQ6 169 aa3.53□□□□□ -1.84
SCFD1-202ENST00000396629 S100A6P06703 90 aa3.51□□□□□ -1.85
SCFD1-202ENST00000396629 SCGB1C2P0DMR2 95 aa3.51□□□□□ -1.85
SCFD1-202ENST00000396629 HSD52Q0P140 79 aa3.51□□□□□ -1.85
SCFD1-202ENST00000396629 VAMP8Q9BV40 100 aa3.51□□□□□ -1.85
SCFD1-202ENST00000396629 HCG22E2RYF7 251 aa3.5□□□□□ -1.85
SCFD1-202ENST00000396629 CXCL6P80162 114 aa3.49□□□□□ -1.85
SCFD1-202ENST00000396629 C14orf132Q9NPU4 83 aa3.48□□□□□ -1.85
SCFD1-202ENST00000396629 CASC2Q6XLA1 102 aa3.47□□□□□ -1.85
SCFD1-202ENST00000396629 S100A1P23297 94 aa3.46□□□□□ -1.86
SCFD1-202ENST00000396629 ATXN8Q156A1 80 aa3.45□□□□□ -1.86
SCFD1-202ENST00000396629 BPY2O14599 106 aa3.44□□□□□ -1.86
SCFD1-202ENST00000396629 H0YAA0 97 aa3.43□□□□□ -1.86
SCFD1-202ENST00000396629 PLAC4Q8WY50 150 aa3.43□□□□□ -1.86
SCFD1-202ENST00000396629 A0A087WVE0 104 aa3.42□□□□□ -1.86
SCFD1-202ENST00000396629 A8MUN3 132 aa3.42□□□□□ -1.86
SCFD1-202ENST00000396629 Q8N9L7 120 aa3.42□□□□□ -1.86
SCFD1-202ENST00000396629 KRTAP10-7P60409 375 aaPredicted RBP3.37□□□□□ -1.87
SCFD1-202ENST00000396629 KRTAP10-12P60413 245 aa3.37□□□□□ -1.87
SCFD1-202ENST00000396629 UQCR10Q9UDW1 63 aa3.36□□□□□ -1.87
SCFD1-202ENST00000396629 ADM2Q7Z4H4 148 aa3.35□□□□□ -1.87
SCFD1-202ENST00000396629 NAA38Q9BRA0 125 aaKnown RBP3.35□□□□□ -1.87
SCFD1-202ENST00000396629 NDUFC1O43677 76 aa3.33□□□□□ -1.88
SCFD1-202ENST00000396629 PYY3Q5JQD4 70 aa3.33□□□□□ -1.88
SCFD1-202ENST00000396629 DSTQ03001 7570 aaKnown RBP3.33□□□□□ -1.88
SCFD1-202ENST00000396629 CYP4F30PQ9H0H9 118 aa3.32□□□□□ -1.88
SCFD1-202ENST00000396629 TP53AIP1Q9HCN2 124 aa3.32□□□□□ -1.88
SCFD1-202ENST00000396629 H3BT86 120 aa3.29□□□□□ -1.88
SCFD1-202ENST00000396629 R4GN34 69 aa3.29□□□□□ -1.88
SCFD1-202ENST00000396629 HMCN1Q96RW7 5635 aa3.26□□□□□ -1.89
SCFD1-202ENST00000396629 K7EP34 96 aa3.26□□□□□ -1.89
SCFD1-202ENST00000396629 AHNAK2Q8IVF2 5795 aa3.25□□□□□ -1.89
SCFD1-202ENST00000396629 TSTD3H0UI37 97 aa3.25□□□□□ -1.89
SCFD1-202ENST00000396629 M0QZ58 72 aa3.24□□□□□ -1.89
SCFD1-202ENST00000396629 M0R143 59 aa3.24□□□□□ -1.89
SCFD1-202ENST00000396629 P0C880 135 aa3.24□□□□□ -1.89
SCFD1-202ENST00000396629 LOC101927531A0A1B0GV80 90 aa3.24□□□□□ -1.89
SCFD1-202ENST00000396629 KRTAP5-10Q6L8G5 202 aa3.24□□□□□ -1.89
SCFD1-202ENST00000396629 UBL5Q9BZL1 73 aa3.22□□□□□ -1.89
SCFD1-202ENST00000396629 TRAV22A0A0B4J277 110 aa3.22□□□□□ -1.89
SCFD1-202ENST00000396629 C20orf197Q8N268 126 aa3.22□□□□□ -1.89
SCFD1-202ENST00000396629 ACYP1P07311 99 aa3.21□□□□□ -1.9
SCFD1-202ENST00000396629 LINC01554Q52M75 96 aa3.2□□□□□ -1.9
SCFD1-202ENST00000396629 KRTAP19-3Q7Z4W3 81 aa3.2□□□□□ -1.9
SCFD1-202ENST00000396629 MT4P47944 62 aa3.19□□□□□ -1.9
SCFD1-202ENST00000396629 KRTAP19-7Q3SYF9 63 aa3.17□□□□□ -1.9
SCFD1-202ENST00000396629 MT1EP04732 61 aa3.16□□□□□ -1.9
SCFD1-202ENST00000396629 KRTAP5-7Q6L8G8 165 aa3.16□□□□□ -1.9
SCFD1-202ENST00000396629 PRAC1Q96KF2 57 aa3.16□□□□□ -1.9
SCFD1-202ENST00000396629 A0A1W2PPM0 123 aa3.14□□□□□ -1.91
SCFD1-202ENST00000396629 CYSTM1Q9H1C7 97 aa3.14□□□□□ -1.91
SCFD1-202ENST00000396629 SPCS1Q9Y6A9 102 aa3.14□□□□□ -1.91
SCFD1-202ENST00000396629 H0Y9P7 68 aa3.11□□□□□ -1.91
SCFD1-202ENST00000396629 ATOX1O00244 68 aa3.11□□□□□ -1.91
SCFD1-202ENST00000396629 TAX1BP3O14907 124 aa3.1□□□□□ -1.91
SCFD1-202ENST00000396629 UQCRQO14949 82 aa3.1□□□□□ -1.91
SCFD1-202ENST00000396629 BATFQ16520 125 aa3.1□□□□□ -1.91
SCFD1-202ENST00000396629 KRTAP5-4Q6L8H1 288 aa3.1□□□□□ -1.91
SCFD1-202ENST00000396629 MT1GP13640 62 aa3.09□□□□□ -1.91
SCFD1-202ENST00000396629 MT-ATP8P03928 68 aa3.07□□□□□ -1.92
SCFD1-202ENST00000396629 PRO0461Q9UI25 63 aa3.06□□□□□ -1.92
SCFD1-202ENST00000396629 PP632Q6XCG6 107 aa3.05□□□□□ -1.92
SCFD1-202ENST00000396629 MT1MQ8N339 61 aa3.03□□□□□ -1.92
SCFD1-202ENST00000396629 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.03□□□□□ -1.92
SCFD1-202ENST00000396629 LINC00208Q96KT6 92 aa3.03□□□□□ -1.92
SCFD1-202ENST00000396629 DMAC1Q96GE9 116 aa3□□□□□ -1.93
SCFD1-202ENST00000396629 SPRR5A0A1B0GTR4 108 aa2.99□□□□□ -1.93
SCFD1-202ENST00000396629 KRTAP19-5Q3LI72 72 aa2.99□□□□□ -1.93
SCFD1-202ENST00000396629 MT1LQ93083 61 aa2.97□□□□□ -1.93
SCFD1-202ENST00000396629 CAMK2N1Q7Z7J9 78 aa2.96□□□□□ -1.94
SCFD1-202ENST00000396629 KRTAP4-3Q9BYR4 195 aa2.96□□□□□ -1.94
SCFD1-202ENST00000396629 SMIM6P0DI80 62 aa2.95□□□□□ -1.94
SCFD1-202ENST00000396629 MP68P56378 58 aa2.95□□□□□ -1.94
SCFD1-202ENST00000396629 HIST1H4AP62805 103 aaKnown RBP2.95□□□□□ -1.94
SCFD1-202ENST00000396629 A0A0D9SG42 100 aa2.93□□□□□ -1.94
SCFD1-202ENST00000396629 KRTAP20-2Q3LI61 65 aa2.93□□□□□ -1.94
SCFD1-202ENST00000396629 ATP5EP2Q5VTU8 51 aa2.93□□□□□ -1.94
SCFD1-202ENST00000396629 TRAV7A0A075B6U4 112 aa2.92□□□□□ -1.94
SCFD1-202ENST00000396629 ETDBQ3ZM63 59 aa2.92□□□□□ -1.94
SCFD1-202ENST00000396629 OCR1Q9BZK8 76 aa2.92□□□□□ -1.94
SCFD1-202ENST00000396629 KRTAP13-4Q3LI77 160 aa2.9□□□□□ -1.95
SCFD1-202ENST00000396629 H3BPC8 53 aa2.89□□□□□ -1.95
SCFD1-202ENST00000396629 MT3P25713 68 aa2.89□□□□□ -1.95
SCFD1-202ENST00000396629 NDUFAF8A1L188 74 aa2.88□□□□□ -1.95
SCFD1-202ENST00000396629 F8W1H4 67 aa2.88□□□□□ -1.95
SCFD1-202ENST00000396629 SPTSSBQ8NFR3 76 aa2.88□□□□□ -1.95
SCFD1-202ENST00000396629 KRTAP5-11Q6L8G4 156 aa2.86□□□□□ -1.95
SCFD1-202ENST00000396629 ACYP2P14621 99 aa2.85□□□□□ -1.95
SCFD1-202ENST00000396629 COL5A1-AS1Q5SY13 56 aa2.85□□□□□ -1.95
SCFD1-202ENST00000396629 FAM240AA0A1B0GVK7 77 aa2.85□□□□□ -1.95
SCFD1-202ENST00000396629 GTF2H5Q6ZYL4 71 aa2.85□□□□□ -1.95
SCFD1-202ENST00000396629 KRTAP5-5Q701N2 237 aaPredicted RBP2.83□□□□□ -1.96
SCFD1-202ENST00000396629 KRTAP12-4P60329 112 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms