RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 Q1T7F1 81 aa9.17□□□□□ -0.94
TNFSF13-205ENST00000396545 MPLKIPQ8TAP9 179 aa9.16□□□□□ -0.94
TNFSF13-205ENST00000396545 ACYP2P14621 99 aa9.16□□□□□ -0.94
TNFSF13-205ENST00000396545 V9GYY9 64 aa9.1□□□□□ -0.95
TNFSF13-205ENST00000396545 LORP23490 312 aaPredicted RBP9.08□□□□□ -0.96
TNFSF13-205ENST00000396545 SPINK7P58062 85 aa9.06□□□□□ -0.96
TNFSF13-205ENST00000396545 KRTAP10-6P60371 365 aaPredicted RBP9.06□□□□□ -0.96
TNFSF13-205ENST00000396545 A8MUN3 132 aa9.03□□□□□ -0.96
TNFSF13-205ENST00000396545 FLGP20930 4061 aaPredicted RBP9.02□□□□□ -0.97
TNFSF13-205ENST00000396545 CHKB-CPT1BH3BT56 60 aa8.99□□□□□ -0.97
TNFSF13-205ENST00000396545 LINC01558Q9Y6Z2 57 aa8.99□□□□□ -0.97
TNFSF13-205ENST00000396545 M0R2T5 61 aa8.97□□□□□ -0.97
TNFSF13-205ENST00000396545 COX6B2Q6YFQ2 88 aa8.97□□□□□ -0.97
TNFSF13-205ENST00000396545 PSPHP1O15172 72 aa8.95□□□□□ -0.98
TNFSF13-205ENST00000396545 KRTAP3-1Q9BYR8 98 aa8.92□□□□□ -0.98
TNFSF13-205ENST00000396545 Q5VV11 94 aa8.91□□□□□ -0.98
TNFSF13-205ENST00000396545 PRR15LQ9BU68 103 aa8.9□□□□□ -0.98
TNFSF13-205ENST00000396545 SPTSSBQ8NFR3 76 aa8.77□□□□□ -1.01
TNFSF13-205ENST00000396545 RBM12B-AS1Q9P1G2 102 aa8.77□□□□□ -1.01
TNFSF13-205ENST00000396545 BRK1Q8WUW1 75 aa8.76□□□□□ -1.01
TNFSF13-205ENST00000396545 PRO0628Q9UI54 55 aa8.73□□□□□ -1.01
TNFSF13-205ENST00000396545 A0A1B0GU69 56 aa8.72□□□□□ -1.01
TNFSF13-205ENST00000396545 KRTAP9-8Q9BYQ0 159 aa8.68□□□□□ -1.02
TNFSF13-205ENST00000396545 A6NED7 52 aa8.66□□□□□ -1.02
TNFSF13-205ENST00000396545 USH2AO75445 5202 aa8.66□□□□□ -1.02
TNFSF13-205ENST00000396545 SSPOA2VEC9 5147 aa8.64□□□□□ -1.03
TNFSF13-205ENST00000396545 H1FX-AS1Q4G0G2 97 aa8.64□□□□□ -1.03
TNFSF13-205ENST00000396545 LCA10Q71F78 164 aa8.61□□□□□ -1.03
TNFSF13-205ENST00000396545 SVIPQ8NHG7 77 aa8.61□□□□□ -1.03
TNFSF13-205ENST00000396545 KRTAP3-3Q9BYR6 98 aa8.61□□□□□ -1.03
TNFSF13-205ENST00000396545 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.6□□□□□ -1.03
TNFSF13-205ENST00000396545 CDC42SE1Q9NRR8 79 aa8.59□□□□□ -1.03
TNFSF13-205ENST00000396545 A8MU10 97 aa8.57□□□□□ -1.04
TNFSF13-205ENST00000396545 SEC61GP60059 68 aa8.57□□□□□ -1.04
TNFSF13-205ENST00000396545 S4R3F8 94 aa8.57□□□□□ -1.04
TNFSF13-205ENST00000396545 KRTAP9-7A8MTY7 169 aa8.56□□□□□ -1.04
TNFSF13-205ENST00000396545 MT2AP02795 61 aa8.52□□□□□ -1.05
TNFSF13-205ENST00000396545 UQCR11O14957 56 aa8.51□□□□□ -1.05
TNFSF13-205ENST00000396545 SPATA8Q6RVD6 105 aa8.48□□□□□ -1.05
TNFSF13-205ENST00000396545 FCGBPQ9Y6R7 5405 aaPredicted RBP8.48□□□□□ -1.05
TNFSF13-205ENST00000396545 MT1FP04733 61 aa8.46□□□□□ -1.06
TNFSF13-205ENST00000396545 MIR22HGQ0VDD5 57 aa8.44□□□□□ -1.06
TNFSF13-205ENST00000396545 LCE2BO14633 110 aa8.43□□□□□ -1.06
TNFSF13-205ENST00000396545 KRTAP9-3Q9BYQ3 159 aa8.41□□□□□ -1.06
TNFSF13-205ENST00000396545 CSAG1Q6PB30 78 aa8.39□□□□□ -1.07
TNFSF13-205ENST00000396545 A0A1B0GU33 70 aa8.39□□□□□ -1.07
TNFSF13-205ENST00000396545 KRTAP19-1Q8IUB9 90 aa8.39□□□□□ -1.07
TNFSF13-205ENST00000396545 KRTAP10-10P60014 251 aa8.38□□□□□ -1.07
TNFSF13-205ENST00000396545 KRTAP3-2Q9BYR7 98 aa8.36□□□□□ -1.07
TNFSF13-205ENST00000396545 H0YAA0 97 aa8.32□□□□□ -1.08
TNFSF13-205ENST00000396545 PMAIP1Q13794 54 aa8.28□□□□□ -1.08
TNFSF13-205ENST00000396545 A6NN06 94 aa8.27□□□□□ -1.09
TNFSF13-205ENST00000396545 P0C880 135 aa8.23□□□□□ -1.09
TNFSF13-205ENST00000396545 ADM2Q7Z4H4 148 aa8.22□□□□□ -1.09
TNFSF13-205ENST00000396545 MACF1Q9UPN3 7388 aaKnown RBP8.2□□□□□ -1.1
TNFSF13-205ENST00000396545 SYNE2Q8WXH0 6885 aaKnown RBP8.19□□□□□ -1.1
TNFSF13-205ENST00000396545 KRTAP19-6Q3LI70 58 aa8.18□□□□□ -1.1
TNFSF13-205ENST00000396545 KRTAP13-4Q3LI77 160 aa8.16□□□□□ -1.1
TNFSF13-205ENST00000396545 KTN1-AS1Q86SY8 53 aa8.05□□□□□ -1.12
TNFSF13-205ENST00000396545 M0QZ58 72 aa8.04□□□□□ -1.12
TNFSF13-205ENST00000396545 K7ERS5 55 aa7.97□□□□□ -1.13
TNFSF13-205ENST00000396545 A0A0D9SG42 100 aa7.97□□□□□ -1.13
TNFSF13-205ENST00000396545 KRTAP6-3Q3LI67 103 aa7.94□□□□□ -1.14
TNFSF13-205ENST00000396545 CRIPTQ9P021 101 aa7.93□□□□□ -1.14
TNFSF13-205ENST00000396545 R4GN34 69 aa7.88□□□□□ -1.15
TNFSF13-205ENST00000396545 KRTAP12-1P59990 96 aa7.87□□□□□ -1.15
TNFSF13-205ENST00000396545 KRTAP12-2P59991 146 aa7.84□□□□□ -1.15
TNFSF13-205ENST00000396545 SPINT4Q6UDR6 99 aa7.76□□□□□ -1.17
TNFSF13-205ENST00000396545 PRAC1Q96KF2 57 aa7.76□□□□□ -1.17
TNFSF13-205ENST00000396545 LINC01554Q52M75 96 aa7.73□□□□□ -1.17
TNFSF13-205ENST00000396545 ROMO1P60602 79 aa7.72□□□□□ -1.17
TNFSF13-205ENST00000396545 NEBP20929 6669 aa7.72□□□□□ -1.17
TNFSF13-205ENST00000396545 SPRR2GQ9BYE4 73 aa7.7□□□□□ -1.18
TNFSF13-205ENST00000396545 MT1BP07438 61 aa7.69□□□□□ -1.18
TNFSF13-205ENST00000396545 MUC12Q9UKN1 5478 aa7.66□□□□□ -1.18
TNFSF13-205ENST00000396545 KRTAP19-8Q3LI54 63 aa7.63□□□□□ -1.19
TNFSF13-205ENST00000396545 KRTAP10-5P60370 271 aa7.56□□□□□ -1.2
TNFSF13-205ENST00000396545 KRTAP25-1Q3LHN0 102 aa7.54□□□□□ -1.2
TNFSF13-205ENST00000396545 KRTAP5-9P26371 169 aa7.49□□□□□ -1.21
TNFSF13-205ENST00000396545 KMT2DO14686 5537 aa7.48□□□□□ -1.21
TNFSF13-205ENST00000396545 KRTAP20-1Q3LI63 56 aa7.47□□□□□ -1.21
TNFSF13-205ENST00000396545 MDN1Q9NU22 5596 aa7.46□□□□□ -1.22
TNFSF13-205ENST00000396545 PLAC4Q8WY50 150 aa7.45□□□□□ -1.22
TNFSF13-205ENST00000396545 C10orf95Q9H7T3 257 aa7.43□□□□□ -1.22
TNFSF13-205ENST00000396545 CAMK2N1Q7Z7J9 78 aa7.41□□□□□ -1.22
TNFSF13-205ENST00000396545 KRTAP2-3P0C7H8 128 aa7.2□□□□□ -1.26
TNFSF13-205ENST00000396545 KRTAP2-4Q9BYR9 128 aa7.2□□□□□ -1.26
TNFSF13-205ENST00000396545 SPRR2FQ96RM1 72 aa7.18□□□□□ -1.26
TNFSF13-205ENST00000396545 MT1XP80297 61 aa7.15□□□□□ -1.27
TNFSF13-205ENST00000396545 PRO2289Q9P1D8 64 aa7.15□□□□□ -1.27
TNFSF13-205ENST00000396545 SPRR2EP22531 72 aa7.13□□□□□ -1.27
TNFSF13-205ENST00000396545 SPRR2BP35325 72 aa7.13□□□□□ -1.27
TNFSF13-205ENST00000396545 SPRR2AP35326 72 aa7.13□□□□□ -1.27
TNFSF13-205ENST00000396545 TNP1P09430 55 aa7.12□□□□□ -1.27
TNFSF13-205ENST00000396545 PP632Q6XCG6 107 aa7.08□□□□□ -1.28
TNFSF13-205ENST00000396545 KRTAP8-1Q8IUC2 63 aa7.06□□□□□ -1.28
TNFSF13-205ENST00000396545 KRTAP23-1A1A580 65 aa7.04□□□□□ -1.28
TNFSF13-205ENST00000396545 LCE1AQ5T7P2 110 aa7.03□□□□□ -1.28
TNFSF13-205ENST00000396545 KRTAP2-2Q9BYT5 123 aa6.96□□□□□ -1.29
TNFSF13-205ENST00000396545 KRTAP2-1Q9BYU5 128 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms