RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 KRTAP10-10P60014 251 aa9.12□□□□□ -0.95
HOXA9-202ENST00000396345 A8MUN3 132 aa9.11□□□□□ -0.95
HOXA9-202ENST00000396345 CSAG1Q6PB30 78 aa9.09□□□□□ -0.95
HOXA9-202ENST00000396345 SERP2Q8N6R1 65 aa9.06□□□□□ -0.96
HOXA9-202ENST00000396345 SNURFQ9Y675 71 aa9.01□□□□□ -0.97
HOXA9-202ENST00000396345 C20orf197Q8N268 126 aa8.98□□□□□ -0.97
HOXA9-202ENST00000396345 DMAC1Q96GE9 116 aa8.98□□□□□ -0.97
HOXA9-202ENST00000396345 KRTAP9-3Q9BYQ3 159 aa8.98□□□□□ -0.97
HOXA9-202ENST00000396345 NDUFC1O43677 76 aa8.97□□□□□ -0.97
HOXA9-202ENST00000396345 COX7CP15954 63 aa8.89□□□□□ -0.99
HOXA9-202ENST00000396345 USH2AO75445 5202 aa8.88□□□□□ -0.99
HOXA9-202ENST00000396345 ACYP2P14621 99 aa8.85□□□□□ -0.99
HOXA9-202ENST00000396345 SSPOA2VEC9 5147 aa8.83□□□□□ -1
HOXA9-202ENST00000396345 SPANXA2-OT1Q8N9U9 137 aa8.82□□□□□ -1
HOXA9-202ENST00000396345 ANAPC13Q9BS18 74 aa8.79□□□□□ -1
HOXA9-202ENST00000396345 H0YAA0 97 aa8.78□□□□□ -1
HOXA9-202ENST00000396345 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.73□□□□□ -1.01
HOXA9-202ENST00000396345 ADM2Q7Z4H4 148 aa8.72□□□□□ -1.01
HOXA9-202ENST00000396345 CHKB-CPT1BH3BT56 60 aa8.7□□□□□ -1.02
HOXA9-202ENST00000396345 KRTAP19-1Q8IUB9 90 aa8.69□□□□□ -1.02
HOXA9-202ENST00000396345 SPTSSBQ8NFR3 76 aa8.68□□□□□ -1.02
HOXA9-202ENST00000396345 CYSTM1Q9H1C7 97 aa8.68□□□□□ -1.02
HOXA9-202ENST00000396345 KRTAP9-7A8MTY7 169 aa8.67□□□□□ -1.02
HOXA9-202ENST00000396345 CRIPTQ9P021 101 aa8.67□□□□□ -1.02
HOXA9-202ENST00000396345 FCGBPQ9Y6R7 5405 aaPredicted RBP8.66□□□□□ -1.02
HOXA9-202ENST00000396345 H7BZZ5 65 aa8.66□□□□□ -1.02
HOXA9-202ENST00000396345 SPRR2GQ9BYE4 73 aa8.64□□□□□ -1.03
HOXA9-202ENST00000396345 CCDC179H3BU77 68 aa8.6□□□□□ -1.03
HOXA9-202ENST00000396345 COA5Q86WW8 74 aa8.56□□□□□ -1.04
HOXA9-202ENST00000396345 P0C880 135 aa8.55□□□□□ -1.04
HOXA9-202ENST00000396345 KRTAP19-8Q3LI54 63 aa8.53□□□□□ -1.04
HOXA9-202ENST00000396345 MACF1Q9UPN3 7388 aaKnown RBP8.52□□□□□ -1.05
HOXA9-202ENST00000396345 Q5VV11 94 aa8.51□□□□□ -1.05
HOXA9-202ENST00000396345 MT1BP07438 61 aa8.47□□□□□ -1.05
HOXA9-202ENST00000396345 KRTAP19-6Q3LI70 58 aa8.47□□□□□ -1.05
HOXA9-202ENST00000396345 R4GN34 69 aa8.46□□□□□ -1.06
HOXA9-202ENST00000396345 SYNE2Q8WXH0 6885 aaKnown RBP8.42□□□□□ -1.06
HOXA9-202ENST00000396345 M0QZ58 72 aa8.41□□□□□ -1.06
HOXA9-202ENST00000396345 ATP5EP56381 51 aaPredicted RBP8.38□□□□□ -1.07
HOXA9-202ENST00000396345 TMEM258P61165 79 aa8.29□□□□□ -1.08
HOXA9-202ENST00000396345 SEC61GP60059 68 aa8.28□□□□□ -1.08
HOXA9-202ENST00000396345 LINC01554Q52M75 96 aa8.27□□□□□ -1.09
HOXA9-202ENST00000396345 SERP1Q9Y6X1 66 aa8.26□□□□□ -1.09
HOXA9-202ENST00000396345 A6NN06 94 aa8.24□□□□□ -1.09
HOXA9-202ENST00000396345 PLAC4Q8WY50 150 aa8.24□□□□□ -1.09
HOXA9-202ENST00000396345 KRTAP10-5P60370 271 aa8.2□□□□□ -1.1
HOXA9-202ENST00000396345 KRTAP13-4Q3LI77 160 aa8.14□□□□□ -1.11
HOXA9-202ENST00000396345 A0A1B0GU69 56 aa8.11□□□□□ -1.11
HOXA9-202ENST00000396345 KRTAP6-3Q3LI67 103 aa8.1□□□□□ -1.11
HOXA9-202ENST00000396345 A0A1B0GU33 70 aa8.09□□□□□ -1.11
HOXA9-202ENST00000396345 PRO2289Q9P1D8 64 aa8.07□□□□□ -1.12
HOXA9-202ENST00000396345 MT1XP80297 61 aa8.04□□□□□ -1.12
HOXA9-202ENST00000396345 SPATA8Q6RVD6 105 aa8.01□□□□□ -1.13
HOXA9-202ENST00000396345 PRR15LQ9BU68 103 aa8□□□□□ -1.13
HOXA9-202ENST00000396345 LINC01558Q9Y6Z2 57 aa8□□□□□ -1.13
HOXA9-202ENST00000396345 PCP4P48539 62 aa7.99□□□□□ -1.13
HOXA9-202ENST00000396345 A0A0D9SG42 100 aa7.96□□□□□ -1.14
HOXA9-202ENST00000396345 NEBP20929 6669 aa7.96□□□□□ -1.14
HOXA9-202ENST00000396345 MUC12Q9UKN1 5478 aa7.88□□□□□ -1.15
HOXA9-202ENST00000396345 SMIM26A0A096LP01 95 aa7.87□□□□□ -1.15
HOXA9-202ENST00000396345 H3BS24 57 aa7.87□□□□□ -1.15
HOXA9-202ENST00000396345 CAMK2N1Q7Z7J9 78 aa7.85□□□□□ -1.15
HOXA9-202ENST00000396345 SPINT4Q6UDR6 99 aa7.82□□□□□ -1.16
HOXA9-202ENST00000396345 A8MU10 97 aa7.79□□□□□ -1.16
HOXA9-202ENST00000396345 KRTAP12-1P59990 96 aa7.79□□□□□ -1.16
HOXA9-202ENST00000396345 V9GYY9 64 aa7.78□□□□□ -1.16
HOXA9-202ENST00000396345 KRTAP12-2P59991 146 aa7.77□□□□□ -1.17
HOXA9-202ENST00000396345 Q1T7F1 81 aa7.74□□□□□ -1.17
HOXA9-202ENST00000396345 UQCR11O14957 56 aa7.73□□□□□ -1.17
HOXA9-202ENST00000396345 LOC100996750A0A140TA64 210 aa7.72□□□□□ -1.17
HOXA9-202ENST00000396345 KRTAP4-6Q9BYQ5 205 aa7.72□□□□□ -1.17
HOXA9-202ENST00000396345 KRTAP10-7P60409 375 aaPredicted RBP7.69□□□□□ -1.18
HOXA9-202ENST00000396345 RPS28P62857 69 aaKnown RBP7.69□□□□□ -1.18
HOXA9-202ENST00000396345 PSPHP1O15172 72 aa7.67□□□□□ -1.18
HOXA9-202ENST00000396345 MDN1Q9NU22 5596 aa7.65□□□□□ -1.19
HOXA9-202ENST00000396345 KRTAP5-9P26371 169 aa7.64□□□□□ -1.19
HOXA9-202ENST00000396345 KRTAP10-12P60413 245 aa7.64□□□□□ -1.19
HOXA9-202ENST00000396345 KMT2DO14686 5537 aa7.62□□□□□ -1.19
HOXA9-202ENST00000396345 MIR22HGQ0VDD5 57 aa7.6□□□□□ -1.19
HOXA9-202ENST00000396345 KRTAP20-1Q3LI63 56 aa7.6□□□□□ -1.19
HOXA9-202ENST00000396345 KRTAP8-1Q8IUC2 63 aa7.59□□□□□ -1.19
HOXA9-202ENST00000396345 KRTAP4-8A0A0G2JLE6 195 aa7.57□□□□□ -1.2
HOXA9-202ENST00000396345 KRTAP4-8Q9BYQ9 185 aa7.57□□□□□ -1.2
HOXA9-202ENST00000396345 SPRR2FQ96RM1 72 aa7.48□□□□□ -1.21
HOXA9-202ENST00000396345 A6NED7 52 aa7.45□□□□□ -1.22
HOXA9-202ENST00000396345 C10orf95Q9H7T3 257 aa7.42□□□□□ -1.22
HOXA9-202ENST00000396345 K7ERS5 55 aa7.39□□□□□ -1.23
HOXA9-202ENST00000396345 KRTAP2-3P0C7H8 128 aa7.35□□□□□ -1.23
HOXA9-202ENST00000396345 KRTAP2-4Q9BYR9 128 aa7.35□□□□□ -1.23
HOXA9-202ENST00000396345 TNP1P09430 55 aa7.33□□□□□ -1.24
HOXA9-202ENST00000396345 SPRR2EP22531 72 aa7.33□□□□□ -1.24
HOXA9-202ENST00000396345 SPRR2BP35325 72 aa7.33□□□□□ -1.24
HOXA9-202ENST00000396345 SPRR2AP35326 72 aa7.33□□□□□ -1.24
HOXA9-202ENST00000396345 LCE1AQ5T7P2 110 aa7.22□□□□□ -1.25
HOXA9-202ENST00000396345 KRTAP19-7Q3SYF9 63 aa7.18□□□□□ -1.26
HOXA9-202ENST00000396345 CDC42SE1Q9NRR8 79 aa7.18□□□□□ -1.26
HOXA9-202ENST00000396345 LCE3AQ5TA76 89 aa7.15□□□□□ -1.26
HOXA9-202ENST00000396345 KRTAP19-5Q3LI72 72 aa7.12□□□□□ -1.27
HOXA9-202ENST00000396345 MT1EP04732 61 aa7.11□□□□□ -1.27
HOXA9-202ENST00000396345 KRTAP25-1Q3LHN0 102 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms