RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 LCA10Q71F78 164 aa7.31□□□□□ -1.24
CXCL12-206ENST00000395795 SMIM20Q8N5G0 67 aa7.31□□□□□ -1.24
CXCL12-206ENST00000395795 C1orf64Q8NEQ6 169 aa7.3□□□□□ -1.24
CXCL12-206ENST00000395795 LOC101927531A0A1B0GV80 90 aa7.29□□□□□ -1.24
CXCL12-206ENST00000395795 KRTAP19-8Q3LI54 63 aa7.29□□□□□ -1.24
CXCL12-206ENST00000395795 SPRR2GQ9BYE4 73 aa7.29□□□□□ -1.24
CXCL12-206ENST00000395795 S4R3F8 94 aa7.29□□□□□ -1.24
CXCL12-206ENST00000395795 MP68P56378 58 aa7.28□□□□□ -1.24
CXCL12-206ENST00000395795 KRTAP3-3Q9BYR6 98 aa7.28□□□□□ -1.24
CXCL12-206ENST00000395795 CYP4F30PQ9H0H9 118 aa7.27□□□□□ -1.25
CXCL12-206ENST00000395795 TRAV7A0A075B6U4 112 aa7.25□□□□□ -1.25
CXCL12-206ENST00000395795 CSAG1Q6PB30 78 aa7.25□□□□□ -1.25
CXCL12-206ENST00000395795 H3BPC8 53 aa7.24□□□□□ -1.25
CXCL12-206ENST00000395795 LINC00208Q96KT6 92 aa7.24□□□□□ -1.25
CXCL12-206ENST00000395795 Q5VV11 94 aa7.18□□□□□ -1.26
CXCL12-206ENST00000395795 A6NN06 94 aa7.17□□□□□ -1.26
CXCL12-206ENST00000395795 KLKP1Q107X0 134 aa7.17□□□□□ -1.26
CXCL12-206ENST00000395795 KRTAP10-5P60370 271 aa7.16□□□□□ -1.26
CXCL12-206ENST00000395795 SERP2Q8N6R1 65 aa7.16□□□□□ -1.26
CXCL12-206ENST00000395795 NEBP20929 6669 aa7.14□□□□□ -1.27
CXCL12-206ENST00000395795 COX7CP15954 63 aa7.06□□□□□ -1.28
CXCL12-206ENST00000395795 C20orf197Q8N268 126 aa7.05□□□□□ -1.28
CXCL12-206ENST00000395795 SNURFQ9Y675 71 aa7.04□□□□□ -1.28
CXCL12-206ENST00000395795 ANAPC13Q9BS18 74 aa7.03□□□□□ -1.28
CXCL12-206ENST00000395795 A8MUN3 132 aa7.02□□□□□ -1.29
CXCL12-206ENST00000395795 CRIPTQ9P021 101 aa7.02□□□□□ -1.29
CXCL12-206ENST00000395795 MUC12Q9UKN1 5478 aa7.02□□□□□ -1.29
CXCL12-206ENST00000395795 KRTAP5-9P26371 169 aa7□□□□□ -1.29
CXCL12-206ENST00000395795 H0YAA0 97 aa6.98□□□□□ -1.29
CXCL12-206ENST00000395795 DMAC1Q96GE9 116 aa6.94□□□□□ -1.3
CXCL12-206ENST00000395795 NDUFC1O43677 76 aa6.91□□□□□ -1.3
CXCL12-206ENST00000395795 SPANXA2-OT1Q8N9U9 137 aa6.91□□□□□ -1.3
CXCL12-206ENST00000395795 ACYP2P14621 99 aa6.89□□□□□ -1.31
CXCL12-206ENST00000395795 KMT2DO14686 5537 aa6.88□□□□□ -1.31
CXCL12-206ENST00000395795 ADM2Q7Z4H4 148 aa6.86□□□□□ -1.31
CXCL12-206ENST00000395795 CCDC179H3BU77 68 aa6.85□□□□□ -1.31
CXCL12-206ENST00000395795 MT1XP80297 61 aa6.85□□□□□ -1.31
CXCL12-206ENST00000395795 H7BZZ5 65 aa6.83□□□□□ -1.32
CXCL12-206ENST00000395795 CYSTM1Q9H1C7 97 aa6.82□□□□□ -1.32
CXCL12-206ENST00000395795 KRTAP20-1Q3LI63 56 aa6.8□□□□□ -1.32
CXCL12-206ENST00000395795 MDN1Q9NU22 5596 aa6.78□□□□□ -1.32
CXCL12-206ENST00000395795 P0C880 135 aa6.77□□□□□ -1.33
CXCL12-206ENST00000395795 CHKB-CPT1BH3BT56 60 aa6.75□□□□□ -1.33
CXCL12-206ENST00000395795 KRTAP3-2Q9BYR7 98 aa6.74□□□□□ -1.33
CXCL12-206ENST00000395795 SPTSSBQ8NFR3 76 aa6.73□□□□□ -1.33
CXCL12-206ENST00000395795 PRO2289Q9P1D8 64 aa6.68□□□□□ -1.34
CXCL12-206ENST00000395795 ATP5EP56381 51 aaPredicted RBP6.67□□□□□ -1.34
CXCL12-206ENST00000395795 KRTAP12-2P59991 146 aa6.67□□□□□ -1.34
CXCL12-206ENST00000395795 COA5Q86WW8 74 aa6.67□□□□□ -1.34
CXCL12-206ENST00000395795 SPRR2FQ96RM1 72 aa6.67□□□□□ -1.34
CXCL12-206ENST00000395795 PLAC4Q8WY50 150 aa6.65□□□□□ -1.34
CXCL12-206ENST00000395795 TMEM258P61165 79 aa6.64□□□□□ -1.35
CXCL12-206ENST00000395795 R4GN34 69 aa6.64□□□□□ -1.35
CXCL12-206ENST00000395795 M0QZ58 72 aa6.62□□□□□ -1.35
CXCL12-206ENST00000395795 KRTAP2-3P0C7H8 128 aa6.61□□□□□ -1.35
CXCL12-206ENST00000395795 KRTAP2-4Q9BYR9 128 aa6.61□□□□□ -1.35
CXCL12-206ENST00000395795 KRTAP4-8A0A0G2JLE6 195 aa6.6□□□□□ -1.35
CXCL12-206ENST00000395795 SPRR2EP22531 72 aa6.6□□□□□ -1.35
CXCL12-206ENST00000395795 SPRR2BP35325 72 aa6.6□□□□□ -1.35
CXCL12-206ENST00000395795 SPRR2AP35326 72 aa6.6□□□□□ -1.35
CXCL12-206ENST00000395795 KRTAP4-8Q9BYQ9 185 aa6.6□□□□□ -1.35
CXCL12-206ENST00000395795 PCP4P48539 62 aa6.59□□□□□ -1.35
CXCL12-206ENST00000395795 LCE1AQ5T7P2 110 aa6.59□□□□□ -1.35
CXCL12-206ENST00000395795 KRTAP8-1Q8IUC2 63 aa6.59□□□□□ -1.35
CXCL12-206ENST00000395795 KRTAP10-7P60409 375 aaPredicted RBP6.53□□□□□ -1.36
CXCL12-206ENST00000395795 LINC01554Q52M75 96 aa6.5□□□□□ -1.37
CXCL12-206ENST00000395795 KRTAP10-12P60413 245 aa6.49□□□□□ -1.37
CXCL12-206ENST00000395795 SEC61GP60059 68 aa6.45□□□□□ -1.38
CXCL12-206ENST00000395795 SERP1Q9Y6X1 66 aa6.44□□□□□ -1.38
CXCL12-206ENST00000395795 KRTAP2-2Q9BYT5 123 aa6.39□□□□□ -1.39
CXCL12-206ENST00000395795 KRTAP2-1Q9BYU5 128 aa6.39□□□□□ -1.39
CXCL12-206ENST00000395795 SPRR2DP22532 72 aa6.37□□□□□ -1.39
CXCL12-206ENST00000395795 A0A1B0GU69 56 aa6.35□□□□□ -1.39
CXCL12-206ENST00000395795 KRTAP13-4Q3LI77 160 aa6.32□□□□□ -1.4
CXCL12-206ENST00000395795 LINC01558Q9Y6Z2 57 aa6.32□□□□□ -1.4
CXCL12-206ENST00000395795 PRR15LQ9BU68 103 aa6.3□□□□□ -1.4
CXCL12-206ENST00000395795 A0A1B0GU33 70 aa6.28□□□□□ -1.4
CXCL12-206ENST00000395795 RPS28P62857 69 aaKnown RBP6.27□□□□□ -1.41
CXCL12-206ENST00000395795 LCE3BQ5TA77 95 aa6.23□□□□□ -1.41
CXCL12-206ENST00000395795 V9GYY9 64 aa6.23□□□□□ -1.41
CXCL12-206ENST00000395795 SMIM26A0A096LP01 95 aa6.22□□□□□ -1.41
CXCL12-206ENST00000395795 Q1T7F1 81 aa6.19□□□□□ -1.42
CXCL12-206ENST00000395795 SPATA8Q6RVD6 105 aa6.17□□□□□ -1.42
CXCL12-206ENST00000395795 KRTAP19-7Q3SYF9 63 aa6.14□□□□□ -1.43
CXCL12-206ENST00000395795 A0A0D9SG42 100 aa6.1□□□□□ -1.43
CXCL12-206ENST00000395795 UQCR11O14957 56 aa6.09□□□□□ -1.43
CXCL12-206ENST00000395795 PSPHP1O15172 72 aa6.08□□□□□ -1.44
CXCL12-206ENST00000395795 LCE5AQ5TCM9 118 aa6.08□□□□□ -1.44
CXCL12-206ENST00000395795 MT1EP04732 61 aa6.06□□□□□ -1.44
CXCL12-206ENST00000395795 CAMK2N1Q7Z7J9 78 aa6.05□□□□□ -1.44
CXCL12-206ENST00000395795 A8MU10 97 aa6.01□□□□□ -1.45
CXCL12-206ENST00000395795 SPINT4Q6UDR6 99 aa6.01□□□□□ -1.45
CXCL12-206ENST00000395795 KRTAP19-3Q7Z4W3 81 aa6□□□□□ -1.45
CXCL12-206ENST00000395795 KRTAP12-1P59990 96 aa5.98□□□□□ -1.45
CXCL12-206ENST00000395795 MIR22HGQ0VDD5 57 aa5.98□□□□□ -1.45
CXCL12-206ENST00000395795 DSTQ03001 7570 aaKnown RBP5.94□□□□□ -1.46
CXCL12-206ENST00000395795 A6NED7 52 aa5.92□□□□□ -1.46
CXCL12-206ENST00000395795 KRTAP19-5Q3LI72 72 aa5.9□□□□□ -1.46
CXCL12-206ENST00000395795 KRTAP4-9Q9BYQ8 210 aa5.86□□□□□ -1.47
CXCL12-206ENST00000395795 MT1GP13640 62 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms