RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 TNXBP22105 4242 aa7.22□□□□□ -1.25
GAPVD1-205ENST00000394084 KRTAP10-8P60410 259 aa7.19□□□□□ -1.26
GAPVD1-205ENST00000394084 Q5VSD8 79 aa7.18□□□□□ -1.26
GAPVD1-205ENST00000394084 EPPK1P58107 5090 aaKnown RBP7.18□□□□□ -1.26
GAPVD1-205ENST00000394084 RPL37P61927 97 aaKnown RBP7.17□□□□□ -1.26
GAPVD1-205ENST00000394084 KRTAP3-3Q9BYR6 98 aa7.16□□□□□ -1.26
GAPVD1-205ENST00000394084 CRIPTQ9P021 101 aa7.16□□□□□ -1.26
GAPVD1-205ENST00000394084 XP32Q5T750 250 aa7.16□□□□□ -1.26
GAPVD1-205ENST00000394084 K7ERS5 55 aa7.15□□□□□ -1.27
GAPVD1-205ENST00000394084 KRTAP10-6P60371 365 aaPredicted RBP7.13□□□□□ -1.27
GAPVD1-205ENST00000394084 KRTAP25-1Q3LHN0 102 aa7.13□□□□□ -1.27
GAPVD1-205ENST00000394084 A0A0D9SG42 100 aa7.12□□□□□ -1.27
GAPVD1-205ENST00000394084 KRTAP13-4Q3LI77 160 aa7.11□□□□□ -1.27
GAPVD1-205ENST00000394084 S4R3F8 94 aa7.1□□□□□ -1.27
GAPVD1-205ENST00000394084 KRTAP17-1Q9BYP8 105 aa7.08□□□□□ -1.28
GAPVD1-205ENST00000394084 KRTAP3-2Q9BYR7 98 aa7.07□□□□□ -1.28
GAPVD1-205ENST00000394084 RYR1P21817 5038 aa7.05□□□□□ -1.28
GAPVD1-205ENST00000394084 P0C880 135 aa7.03□□□□□ -1.28
GAPVD1-205ENST00000394084 KIAA1109Q2LD37 5005 aa7.01□□□□□ -1.29
GAPVD1-205ENST00000394084 ROMO1P60602 79 aa7□□□□□ -1.29
GAPVD1-205ENST00000394084 LPAP08519 4548 aa6.98□□□□□ -1.29
GAPVD1-205ENST00000394084 MT1HL1P0DM35 61 aa6.97□□□□□ -1.29
GAPVD1-205ENST00000394084 LRP2P98164 4655 aa6.93□□□□□ -1.3
GAPVD1-205ENST00000394084 KRTAP12-2P59991 146 aa6.88□□□□□ -1.31
GAPVD1-205ENST00000394084 SPINT4Q6UDR6 99 aa6.86□□□□□ -1.31
GAPVD1-205ENST00000394084 TPRXLQ17RH7 258 aa6.86□□□□□ -1.31
GAPVD1-205ENST00000394084 C10orf95Q9H7T3 257 aa6.86□□□□□ -1.31
GAPVD1-205ENST00000394084 BIRC6Q9NR09 4857 aa6.84□□□□□ -1.31
GAPVD1-205ENST00000394084 KRTAP12-1P59990 96 aa6.79□□□□□ -1.32
GAPVD1-205ENST00000394084 H3BS24 57 aa6.79□□□□□ -1.32
GAPVD1-205ENST00000394084 ABCA13Q86UQ4 5058 aa6.77□□□□□ -1.33
GAPVD1-205ENST00000394084 HERC2O95714 4834 aa6.76□□□□□ -1.33
GAPVD1-205ENST00000394084 KRTAP4-5Q9BYR2 181 aa6.72□□□□□ -1.33
GAPVD1-205ENST00000394084 M0QZ58 72 aa6.71□□□□□ -1.34
GAPVD1-205ENST00000394084 R4GN34 69 aa6.62□□□□□ -1.35
GAPVD1-205ENST00000394084 PCLOQ9Y6V0 5065 aa6.58□□□□□ -1.36
GAPVD1-205ENST00000394084 LORP23490 312 aaPredicted RBP6.57□□□□□ -1.36
GAPVD1-205ENST00000394084 SEC61BP60468 96 aaKnown RBP6.57□□□□□ -1.36
GAPVD1-205ENST00000394084 MUC17Q685J3 4493 aa6.56□□□□□ -1.36
GAPVD1-205ENST00000394084 KRTAP4-1Q9BYQ7 146 aa6.56□□□□□ -1.36
GAPVD1-205ENST00000394084 KRTAP15-1Q3LI76 137 aa6.5□□□□□ -1.37
GAPVD1-205ENST00000394084 J3QL48 77 aa6.49□□□□□ -1.37
GAPVD1-205ENST00000394084 NDUFAF8A1L188 74 aa6.43□□□□□ -1.38
GAPVD1-205ENST00000394084 A0A0A0MQY5 61 aa6.4□□□□□ -1.38
GAPVD1-205ENST00000394084 HERC1Q15751 4861 aa6.38□□□□□ -1.39
GAPVD1-205ENST00000394084 KRTAP19-2Q3LHN2 52 aa6.37□□□□□ -1.39
GAPVD1-205ENST00000394084 MUC2Q02817 5179 aa6.36□□□□□ -1.39
GAPVD1-205ENST00000394084 CAMK2N1Q7Z7J9 78 aa6.31□□□□□ -1.4
GAPVD1-205ENST00000394084 HMCN2Q8NDA2 5059 aa6.25□□□□□ -1.41
GAPVD1-205ENST00000394084 PLAC4Q8WY50 150 aa6.23□□□□□ -1.41
GAPVD1-205ENST00000394084 FLGP20930 4061 aaPredicted RBP6.19□□□□□ -1.42
GAPVD1-205ENST00000394084 PP632Q6XCG6 107 aa6.11□□□□□ -1.43
GAPVD1-205ENST00000394084 FAT4Q6V0I7 4981 aa6.09□□□□□ -1.44
GAPVD1-205ENST00000394084 TNP1P09430 55 aa6.03□□□□□ -1.44
GAPVD1-205ENST00000394084 UBR4Q5T4S7 5183 aa6.01□□□□□ -1.45
GAPVD1-205ENST00000394084 LCE2CQ5TA81 110 aa5.99□□□□□ -1.45
GAPVD1-205ENST00000394084 M0R2T5 61 aa5.95□□□□□ -1.46
GAPVD1-205ENST00000394084 LUZP6Q538Z0 58 aa5.95□□□□□ -1.46
GAPVD1-205ENST00000394084 RNF213Q63HN8 5207 aa5.92□□□□□ -1.46
GAPVD1-205ENST00000394084 KRTAP19-1Q8IUB9 90 aa5.9□□□□□ -1.47
GAPVD1-205ENST00000394084 SPRR2GQ9BYE4 73 aa5.88□□□□□ -1.47
GAPVD1-205ENST00000394084 KRTAP23-1A1A580 65 aa5.83□□□□□ -1.48
GAPVD1-205ENST00000394084 MT1HP80294 61 aa5.83□□□□□ -1.48
GAPVD1-205ENST00000394084 KRTAP10-10P60014 251 aa5.8□□□□□ -1.48
GAPVD1-205ENST00000394084 MT1FP04733 61 aa5.78□□□□□ -1.48
GAPVD1-205ENST00000394084 MT2AP02795 61 aa5.77□□□□□ -1.49
GAPVD1-205ENST00000394084 LCE3AQ5TA76 89 aa5.75□□□□□ -1.49
GAPVD1-205ENST00000394084 SPRR5A0A1B0GTR4 108 aa5.71□□□□□ -1.49
GAPVD1-205ENST00000394084 LCE2DQ5TA82 110 aaPredicted RBP5.7□□□□□ -1.5
GAPVD1-205ENST00000394084 KRTAP9-8Q9BYQ0 159 aa5.69□□□□□ -1.5
GAPVD1-205ENST00000394084 KRTAP19-8Q3LI54 63 aa5.6□□□□□ -1.51
GAPVD1-205ENST00000394084 MT1BP07438 61 aa5.58□□□□□ -1.52
GAPVD1-205ENST00000394084 KRTAP10-5P60370 271 aa5.57□□□□□ -1.52
GAPVD1-205ENST00000394084 MT1XP80297 61 aa5.56□□□□□ -1.52
GAPVD1-205ENST00000394084 KRTAP8-1Q8IUC2 63 aa5.53□□□□□ -1.52
GAPVD1-205ENST00000394084 KRTAP10-12P60413 245 aa5.48□□□□□ -1.53
GAPVD1-205ENST00000394084 KRTAP10-7P60409 375 aaPredicted RBP5.45□□□□□ -1.54
GAPVD1-205ENST00000394084 KRTAP12-3P60328 96 aa5.45□□□□□ -1.54
GAPVD1-205ENST00000394084 KRTAP9-3Q9BYQ3 159 aa5.45□□□□□ -1.54
GAPVD1-205ENST00000394084 LCE2AQ5TA79 106 aaPredicted RBP5.39□□□□□ -1.55
GAPVD1-205ENST00000394084 PRO2289Q9P1D8 64 aa5.3□□□□□ -1.56
GAPVD1-205ENST00000394084 USH2AO75445 5202 aa5.28□□□□□ -1.56
GAPVD1-205ENST00000394084 LCE2BO14633 110 aa5.26□□□□□ -1.57
GAPVD1-205ENST00000394084 KMT2DO14686 5537 aa5.23□□□□□ -1.57
GAPVD1-205ENST00000394084 KRTAP19-5Q3LI72 72 aa5.22□□□□□ -1.57
GAPVD1-205ENST00000394084 KRTAP4-8A0A0G2JLE6 195 aa5.14□□□□□ -1.59
GAPVD1-205ENST00000394084 KRTAP4-8Q9BYQ9 185 aa5.14□□□□□ -1.59
GAPVD1-205ENST00000394084 LCE3CQ5T5A8 94 aa5.11□□□□□ -1.59
GAPVD1-205ENST00000394084 INE1O15225 51 aa5.06□□□□□ -1.6
GAPVD1-205ENST00000394084 KRTAP9-6A8MVA2 160 aa4.98□□□□□ -1.61
GAPVD1-205ENST00000394084 KRTAP4-7Q9BYR0 210 aa4.96□□□□□ -1.62
GAPVD1-205ENST00000394084 KRTAP19-7Q3SYF9 63 aa4.95□□□□□ -1.62
GAPVD1-205ENST00000394084 FSIP2Q5CZC0 6907 aa4.89□□□□□ -1.63
GAPVD1-205ENST00000394084 SSPOA2VEC9 5147 aa4.89□□□□□ -1.63
GAPVD1-205ENST00000394084 MT1LQ93083 61 aa4.81□□□□□ -1.64
GAPVD1-205ENST00000394084 MT1EP04732 61 aa4.8□□□□□ -1.64
GAPVD1-205ENST00000394084 KRTAP9-2Q9BYQ4 174 aa4.79□□□□□ -1.64
GAPVD1-205ENST00000394084 KRTAP2-3P0C7H8 128 aa4.74□□□□□ -1.65
GAPVD1-205ENST00000394084 KRTAP2-4Q9BYR9 128 aa4.74□□□□□ -1.65
GAPVD1-205ENST00000394084 KRTAP2-1Q9BYU5 128 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms