RNA–Protein interactions for RNA: ENST00000394083.6

GAPVD1-204, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 4,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-204ENST00000394083 C8orf87E5RJ46 101 aa4.32□□□□□ -1.72
GAPVD1-204ENST00000394083 SPAG11AQ6PDA7 123 aa4.32□□□□□ -1.72
GAPVD1-204ENST00000394083 SPINK7P58062 85 aa4.31□□□□□ -1.72
GAPVD1-204ENST00000394083 C4orf48Q5BLP8 95 aa4.31□□□□□ -1.72
GAPVD1-204ENST00000394083 USH2AO75445 5202 aa4.31□□□□□ -1.72
GAPVD1-204ENST00000394083 LOC101927531A0A1B0GV80 90 aa4.3□□□□□ -1.72
GAPVD1-204ENST00000394083 KRTAP3-2Q9BYR7 98 aa4.3□□□□□ -1.72
GAPVD1-204ENST00000394083 SPINT4Q6UDR6 99 aa4.29□□□□□ -1.72
GAPVD1-204ENST00000394083 IGKV2D-30A0A075B6S6 120 aa4.27□□□□□ -1.73
GAPVD1-204ENST00000394083 KRTAP13-4Q3LI77 160 aa4.27□□□□□ -1.73
GAPVD1-204ENST00000394083 KRTAP10-6P60371 365 aaPredicted RBP4.26□□□□□ -1.73
GAPVD1-204ENST00000394083 Q75L30 129 aa4.26□□□□□ -1.73
GAPVD1-204ENST00000394083 FAM229AH3BQW9 127 aa4.24□□□□□ -1.73
GAPVD1-204ENST00000394083 LINC01558Q9Y6Z2 57 aa4.23□□□□□ -1.73
GAPVD1-204ENST00000394083 H3BS24 57 aa4.22□□□□□ -1.73
GAPVD1-204ENST00000394083 RPL37P61927 97 aaKnown RBP4.21□□□□□ -1.74
GAPVD1-204ENST00000394083 LCE2CQ5TA81 110 aa4.21□□□□□ -1.74
GAPVD1-204ENST00000394083 LORP23490 312 aaPredicted RBP4.2□□□□□ -1.74
GAPVD1-204ENST00000394083 KTN1-AS1Q86SY8 53 aa4.2□□□□□ -1.74
GAPVD1-204ENST00000394083 H0YAA0 97 aa4.2□□□□□ -1.74
GAPVD1-204ENST00000394083 ATP11AUNQ6ZP68 121 aa4.19□□□□□ -1.74
GAPVD1-204ENST00000394083 C7orf65Q6ZTY9 151 aa4.19□□□□□ -1.74
GAPVD1-204ENST00000394083 A0A1B0GU69 56 aa4.18□□□□□ -1.74
GAPVD1-204ENST00000394083 LINC01554Q52M75 96 aa4.16□□□□□ -1.74
GAPVD1-204ENST00000394083 TPRXLQ17RH7 258 aa4.13□□□□□ -1.75
GAPVD1-204ENST00000394083 LUZP6Q538Z0 58 aa4.13□□□□□ -1.75
GAPVD1-204ENST00000394083 P0C880 135 aa4.12□□□□□ -1.75
GAPVD1-204ENST00000394083 A0A0A0MQY5 61 aa4.12□□□□□ -1.75
GAPVD1-204ENST00000394083 A6NN06 94 aa4.12□□□□□ -1.75
GAPVD1-204ENST00000394083 ADM2Q7Z4H4 148 aa4.1□□□□□ -1.75
GAPVD1-204ENST00000394083 CRIPTQ9P021 101 aa4.1□□□□□ -1.75
GAPVD1-204ENST00000394083 KMT2DO14686 5537 aa4.1□□□□□ -1.75
GAPVD1-204ENST00000394083 ACYP2P14621 99 aa4.09□□□□□ -1.75
GAPVD1-204ENST00000394083 COX6B2Q6YFQ2 88 aa4.09□□□□□ -1.76
GAPVD1-204ENST00000394083 UQCR11O14957 56 aa4.08□□□□□ -1.76
GAPVD1-204ENST00000394083 SPATA8Q6RVD6 105 aa4.05□□□□□ -1.76
GAPVD1-204ENST00000394083 RBM12B-AS1Q9P1G2 102 aa4.04□□□□□ -1.76
GAPVD1-204ENST00000394083 CDC42SE1Q9NRR8 79 aa4.01□□□□□ -1.77
GAPVD1-204ENST00000394083 MIR22HGQ0VDD5 57 aa4.01□□□□□ -1.77
GAPVD1-204ENST00000394083 CAMK2N1Q7Z7J9 78 aa3.97□□□□□ -1.77
GAPVD1-204ENST00000394083 KRTAP12-2P59991 146 aa3.96□□□□□ -1.77
GAPVD1-204ENST00000394083 H1FX-AS1Q4G0G2 97 aa3.9□□□□□ -1.78
GAPVD1-204ENST00000394083 PRAC1Q96KF2 57 aa3.9□□□□□ -1.78
GAPVD1-204ENST00000394083 KRTAP9-8Q9BYQ0 159 aa3.9□□□□□ -1.79
GAPVD1-204ENST00000394083 KRTAP12-1P59990 96 aa3.89□□□□□ -1.79
GAPVD1-204ENST00000394083 MT1HP80294 61 aa3.89□□□□□ -1.79
GAPVD1-204ENST00000394083 SEC61BP60468 96 aaKnown RBP3.87□□□□□ -1.79
GAPVD1-204ENST00000394083 KRTAP19-1Q8IUB9 90 aa3.87□□□□□ -1.79
GAPVD1-204ENST00000394083 FSIP2Q5CZC0 6907 aa3.87□□□□□ -1.79
GAPVD1-204ENST00000394083 S4R3F8 94 aa3.86□□□□□ -1.79
GAPVD1-204ENST00000394083 SSPOA2VEC9 5147 aa3.86□□□□□ -1.79
GAPVD1-204ENST00000394083 A0A1B0GU33 70 aa3.83□□□□□ -1.8
GAPVD1-204ENST00000394083 MT1FP04733 61 aa3.83□□□□□ -1.8
GAPVD1-204ENST00000394083 CSAG1Q6PB30 78 aa3.79□□□□□ -1.8
GAPVD1-204ENST00000394083 MT2AP02795 61 aa3.76□□□□□ -1.81
GAPVD1-204ENST00000394083 LCE2DQ5TA82 110 aaPredicted RBP3.76□□□□□ -1.81
GAPVD1-204ENST00000394083 C10orf95Q9H7T3 257 aa3.74□□□□□ -1.81
GAPVD1-204ENST00000394083 LCE2AQ5TA79 106 aaPredicted RBP3.73□□□□□ -1.81
GAPVD1-204ENST00000394083 A0A0D9SG42 100 aa3.73□□□□□ -1.81
GAPVD1-204ENST00000394083 J3QL48 77 aa3.7□□□□□ -1.82
GAPVD1-204ENST00000394083 KRTAP9-3Q9BYQ3 159 aa3.69□□□□□ -1.82
GAPVD1-204ENST00000394083 MT1BP07438 61 aa3.68□□□□□ -1.82
GAPVD1-204ENST00000394083 SPRR2GQ9BYE4 73 aa3.68□□□□□ -1.82
GAPVD1-204ENST00000394083 LCE2BO14633 110 aa3.68□□□□□ -1.82
GAPVD1-204ENST00000394083 FCGBPQ9Y6R7 5405 aaPredicted RBP3.67□□□□□ -1.82
GAPVD1-204ENST00000394083 NDUFAF8A1L188 74 aa3.64□□□□□ -1.83
GAPVD1-204ENST00000394083 ROMO1P60602 79 aa3.63□□□□□ -1.83
GAPVD1-204ENST00000394083 KRTAP10-5P60370 271 aa3.61□□□□□ -1.83
GAPVD1-204ENST00000394083 MT1XP80297 61 aa3.59□□□□□ -1.83
GAPVD1-204ENST00000394083 MUC12Q9UKN1 5478 aa3.58□□□□□ -1.84
GAPVD1-204ENST00000394083 M0QZ58 72 aa3.57□□□□□ -1.84
GAPVD1-204ENST00000394083 KRTAP25-1Q3LHN0 102 aa3.56□□□□□ -1.84
GAPVD1-204ENST00000394083 KRTAP19-8Q3LI54 63 aa3.56□□□□□ -1.84
GAPVD1-204ENST00000394083 PLAC4Q8WY50 150 aa3.54□□□□□ -1.84
GAPVD1-204ENST00000394083 KRTAP10-7P60409 375 aaPredicted RBP3.49□□□□□ -1.85
GAPVD1-204ENST00000394083 R4GN34 69 aa3.48□□□□□ -1.85
GAPVD1-204ENST00000394083 KRTAP15-1Q3LI76 137 aa3.43□□□□□ -1.86
GAPVD1-204ENST00000394083 PP632Q6XCG6 107 aa3.43□□□□□ -1.86
GAPVD1-204ENST00000394083 MDN1Q9NU22 5596 aa3.42□□□□□ -1.86
GAPVD1-204ENST00000394083 MACF1Q9UPN3 7388 aaKnown RBP3.42□□□□□ -1.86
GAPVD1-204ENST00000394083 KRTAP4-8A0A0G2JLE6 195 aa3.4□□□□□ -1.86
GAPVD1-204ENST00000394083 KRTAP4-8Q9BYQ9 185 aa3.4□□□□□ -1.86
GAPVD1-204ENST00000394083 DSTQ03001 7570 aaKnown RBP3.4□□□□□ -1.87
GAPVD1-204ENST00000394083 KRTAP10-10P60014 251 aa3.39□□□□□ -1.87
GAPVD1-204ENST00000394083 LCE3AQ5TA76 89 aa3.36□□□□□ -1.87
GAPVD1-204ENST00000394083 SYNE2Q8WXH0 6885 aaKnown RBP3.34□□□□□ -1.87
GAPVD1-204ENST00000394083 KRTAP10-12P60413 245 aa3.3□□□□□ -1.88
GAPVD1-204ENST00000394083 SPRR5A0A1B0GTR4 108 aa3.27□□□□□ -1.89
GAPVD1-204ENST00000394083 KRTAP19-7Q3SYF9 63 aa3.27□□□□□ -1.89
GAPVD1-204ENST00000394083 KRTAP9-6A8MVA2 160 aa3.27□□□□□ -1.89
GAPVD1-204ENST00000394083 M0R2T5 61 aa3.26□□□□□ -1.89
GAPVD1-204ENST00000394083 KRTAP8-1Q8IUC2 63 aa3.24□□□□□ -1.89
GAPVD1-204ENST00000394083 KRTAP4-7Q9BYR0 210 aa3.23□□□□□ -1.89
GAPVD1-204ENST00000394083 TNP1P09430 55 aa3.22□□□□□ -1.89
GAPVD1-204ENST00000394083 KRTAP19-5Q3LI72 72 aa3.17□□□□□ -1.9
GAPVD1-204ENST00000394083 KRTAP19-6Q3LI70 58 aa3.14□□□□□ -1.91
GAPVD1-204ENST00000394083 KRTAP23-1A1A580 65 aa3.11□□□□□ -1.91
GAPVD1-204ENST00000394083 KRTAP4-3Q9BYR4 195 aa3.09□□□□□ -1.92
GAPVD1-204ENST00000394083 INE1O15225 51 aa3.05□□□□□ -1.92
GAPVD1-204ENST00000394083 MT1EP04732 61 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms