RNA–Protein interactions for RNA: ENST00000393606.7

UBTF-203, Transcript of upstream binding transcription factor, humanhuman

TSL 1 (best) BASIC

Gene UBTF, Length 2,683 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBTF-203ENST00000393606 TNXBP22105 4242 aa10.26□□□□□ -0.77
UBTF-203ENST00000393606 A0A1B0GU33 70 aa10.25□□□□□ -0.77
UBTF-203ENST00000393606 Q5VSD8 79 aa10.25□□□□□ -0.77
UBTF-203ENST00000393606 HSPG2P98160 4391 aa10.24□□□□□ -0.77
UBTF-203ENST00000393606 RYR3Q15413 4870 aa10.24□□□□□ -0.77
UBTF-203ENST00000393606 H1FX-AS1Q4G0G2 97 aa10.19□□□□□ -0.78
UBTF-203ENST00000393606 KRTAP17-1Q9BYP8 105 aa10.18□□□□□ -0.78
UBTF-203ENST00000393606 KRTAP10-8P60410 259 aa10.14□□□□□ -0.79
UBTF-203ENST00000393606 COX6B2Q6YFQ2 88 aa10.12□□□□□ -0.79
UBTF-203ENST00000393606 KIAA1109Q2LD37 5005 aa10.1□□□□□ -0.79
UBTF-203ENST00000393606 RYR1P21817 5038 aa10.06□□□□□ -0.8
UBTF-203ENST00000393606 XP32Q5T750 250 aa10.03□□□□□ -0.8
UBTF-203ENST00000393606 RPL37P61927 97 aaKnown RBP10□□□□□ -0.81
UBTF-203ENST00000393606 LPAP08519 4548 aa9.98□□□□□ -0.81
UBTF-203ENST00000393606 SPINT4Q6UDR6 99 aa9.94□□□□□ -0.82
UBTF-203ENST00000393606 K7ERS5 55 aa9.91□□□□□ -0.82
UBTF-203ENST00000393606 TPRXLQ17RH7 258 aa9.9□□□□□ -0.82
UBTF-203ENST00000393606 KRTAP3-3Q9BYR6 98 aa9.9□□□□□ -0.82
UBTF-203ENST00000393606 EPPK1P58107 5090 aaKnown RBP9.9□□□□□ -0.82
UBTF-203ENST00000393606 C10orf95Q9H7T3 257 aa9.89□□□□□ -0.83
UBTF-203ENST00000393606 MT1HL1P0DM35 61 aa9.89□□□□□ -0.83
UBTF-203ENST00000393606 KRTAP10-6P60371 365 aaPredicted RBP9.88□□□□□ -0.83
UBTF-203ENST00000393606 LRP2P98164 4655 aa9.86□□□□□ -0.83
UBTF-203ENST00000393606 KRTAP13-4Q3LI77 160 aa9.86□□□□□ -0.83
UBTF-203ENST00000393606 A0A0D9SG42 100 aa9.86□□□□□ -0.83
UBTF-203ENST00000393606 NDUFAF8A1L188 74 aa9.85□□□□□ -0.83
UBTF-203ENST00000393606 S4R3F8 94 aa9.83□□□□□ -0.84
UBTF-203ENST00000393606 ABCA13Q86UQ4 5058 aa9.8□□□□□ -0.84
UBTF-203ENST00000393606 KRTAP3-2Q9BYR7 98 aa9.79□□□□□ -0.84
UBTF-203ENST00000393606 KRTAP15-1Q3LI76 137 aa9.69□□□□□ -0.86
UBTF-203ENST00000393606 KRTAP4-5Q9BYR2 181 aa9.69□□□□□ -0.86
UBTF-203ENST00000393606 KRTAP12-2P59991 146 aa9.55□□□□□ -0.88
UBTF-203ENST00000393606 KRTAP12-1P59990 96 aa9.42□□□□□ -0.9
UBTF-203ENST00000393606 A0A0A0MQY5 61 aa9.35□□□□□ -0.91
UBTF-203ENST00000393606 J3QL48 77 aa9.33□□□□□ -0.92
UBTF-203ENST00000393606 KRTAP4-1Q9BYQ7 146 aa9.29□□□□□ -0.92
UBTF-203ENST00000393606 MUC2Q02817 5179 aa9.29□□□□□ -0.92
UBTF-203ENST00000393606 HERC2O95714 4834 aa9.29□□□□□ -0.92
UBTF-203ENST00000393606 MUC17Q685J3 4493 aa9.27□□□□□ -0.92
UBTF-203ENST00000393606 M0QZ58 72 aa9.25□□□□□ -0.93
UBTF-203ENST00000393606 SEC61BP60468 96 aaKnown RBP9.24□□□□□ -0.93
UBTF-203ENST00000393606 LORP23490 312 aaPredicted RBP9.18□□□□□ -0.94
UBTF-203ENST00000393606 R4GN34 69 aa9.18□□□□□ -0.94
UBTF-203ENST00000393606 LUZP6Q538Z0 58 aa9.04□□□□□ -0.96
UBTF-203ENST00000393606 HERC1Q15751 4861 aa8.99□□□□□ -0.97
UBTF-203ENST00000393606 PLAC4Q8WY50 150 aa8.95□□□□□ -0.98
UBTF-203ENST00000393606 KRTAP19-2Q3LHN2 52 aa8.95□□□□□ -0.98
UBTF-203ENST00000393606 PCLOQ9Y6V0 5065 aa8.89□□□□□ -0.99
UBTF-203ENST00000393606 BIRC6Q9NR09 4857 aa8.88□□□□□ -0.99
UBTF-203ENST00000393606 FAT4Q6V0I7 4981 aa8.8□□□□□ -1
UBTF-203ENST00000393606 FLGP20930 4061 aaPredicted RBP8.76□□□□□ -1.01
UBTF-203ENST00000393606 CAMK2N1Q7Z7J9 78 aa8.74□□□□□ -1.01
UBTF-203ENST00000393606 HMCN2Q8NDA2 5059 aa8.71□□□□□ -1.01
UBTF-203ENST00000393606 RNF213Q63HN8 5207 aa8.65□□□□□ -1.02
UBTF-203ENST00000393606 UBR4Q5T4S7 5183 aa8.54□□□□□ -1.04
UBTF-203ENST00000393606 M0R2T5 61 aa8.5□□□□□ -1.05
UBTF-203ENST00000393606 LCE2CQ5TA81 110 aa8.49□□□□□ -1.05
UBTF-203ENST00000393606 PP632Q6XCG6 107 aa8.47□□□□□ -1.05
UBTF-203ENST00000393606 TNP1P09430 55 aa8.31□□□□□ -1.08
UBTF-203ENST00000393606 MT1HP80294 61 aa8.29□□□□□ -1.08
UBTF-203ENST00000393606 KRTAP19-1Q8IUB9 90 aa8.26□□□□□ -1.09
UBTF-203ENST00000393606 KRTAP10-10P60014 251 aa8.23□□□□□ -1.09
UBTF-203ENST00000393606 SPRR2GQ9BYE4 73 aa8.2□□□□□ -1.1
UBTF-203ENST00000393606 MT1FP04733 61 aa8.18□□□□□ -1.1
UBTF-203ENST00000393606 MT2AP02795 61 aa8.15□□□□□ -1.1
UBTF-203ENST00000393606 SPRR5A0A1B0GTR4 108 aa8.09□□□□□ -1.11
UBTF-203ENST00000393606 KRTAP23-1A1A580 65 aa8.08□□□□□ -1.12
UBTF-203ENST00000393606 KRTAP9-8Q9BYQ0 159 aa8.07□□□□□ -1.12
UBTF-203ENST00000393606 LCE3AQ5TA76 89 aa7.95□□□□□ -1.14
UBTF-203ENST00000393606 PRO2289Q9P1D8 64 aa7.85□□□□□ -1.15
UBTF-203ENST00000393606 MT1BP07438 61 aa7.84□□□□□ -1.16
UBTF-203ENST00000393606 KRTAP19-8Q3LI54 63 aa7.81□□□□□ -1.16
UBTF-203ENST00000393606 KRTAP10-5P60370 271 aa7.79□□□□□ -1.16
UBTF-203ENST00000393606 MT1XP80297 61 aa7.77□□□□□ -1.16
UBTF-203ENST00000393606 USH2AO75445 5202 aa7.71□□□□□ -1.17
UBTF-203ENST00000393606 KRTAP9-3Q9BYQ3 159 aa7.71□□□□□ -1.17
UBTF-203ENST00000393606 KRTAP10-7P60409 375 aaPredicted RBP7.65□□□□□ -1.18
UBTF-203ENST00000393606 KRTAP8-1Q8IUC2 63 aa7.63□□□□□ -1.19
UBTF-203ENST00000393606 KRTAP10-12P60413 245 aa7.61□□□□□ -1.19
UBTF-203ENST00000393606 INE1O15225 51 aa7.55□□□□□ -1.2
UBTF-203ENST00000393606 KMT2DO14686 5537 aa7.55□□□□□ -1.2
UBTF-203ENST00000393606 KRTAP12-3P60328 96 aa7.52□□□□□ -1.21
UBTF-203ENST00000393606 LCE2BO14633 110 aa7.5□□□□□ -1.21
UBTF-203ENST00000393606 KRTAP19-5Q3LI72 72 aa7.29□□□□□ -1.24
UBTF-203ENST00000393606 LCE2AQ5TA79 106 aaPredicted RBP7.29□□□□□ -1.24
UBTF-203ENST00000393606 KRTAP4-8A0A0G2JLE6 195 aa7.28□□□□□ -1.24
UBTF-203ENST00000393606 KRTAP4-8Q9BYQ9 185 aa7.28□□□□□ -1.24
UBTF-203ENST00000393606 FSIP2Q5CZC0 6907 aa7.19□□□□□ -1.26
UBTF-203ENST00000393606 LCE3CQ5T5A8 94 aa7.05□□□□□ -1.28
UBTF-203ENST00000393606 KRTAP4-7Q9BYR0 210 aa6.97□□□□□ -1.29
UBTF-203ENST00000393606 SSPOA2VEC9 5147 aa6.97□□□□□ -1.29
UBTF-203ENST00000393606 KRTAP19-7Q3SYF9 63 aa6.92□□□□□ -1.3
UBTF-203ENST00000393606 KRTAP9-6A8MVA2 160 aa6.9□□□□□ -1.3
UBTF-203ENST00000393606 MT1EP04732 61 aa6.71□□□□□ -1.34
UBTF-203ENST00000393606 MT1LQ93083 61 aa6.7□□□□□ -1.34
UBTF-203ENST00000393606 FCGBPQ9Y6R7 5405 aaPredicted RBP6.66□□□□□ -1.34
UBTF-203ENST00000393606 MUC12Q9UKN1 5478 aa6.63□□□□□ -1.35
UBTF-203ENST00000393606 KRTAP2-3P0C7H8 128 aa6.61□□□□□ -1.35
UBTF-203ENST00000393606 KRTAP2-4Q9BYR9 128 aa6.61□□□□□ -1.35
UBTF-203ENST00000393606 KRTAP2-1Q9BYU5 128 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms