RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 A6NED7 52 aa11.17□□□□□ -0.62
HMGA2-203ENST00000393578 H1FX-AS1Q4G0G2 97 aa11.17□□□□□ -0.62
HMGA2-203ENST00000393578 S4R3F8 94 aa11.14□□□□□ -0.63
HMGA2-203ENST00000393578 LCA10Q71F78 164 aa11.14□□□□□ -0.63
HMGA2-203ENST00000393578 SEC61GP60059 68 aa11.13□□□□□ -0.63
HMGA2-203ENST00000393578 PRO0628Q9UI54 55 aa11.12□□□□□ -0.63
HMGA2-203ENST00000393578 KRTAP3-3Q9BYR6 98 aa11.12□□□□□ -0.63
HMGA2-203ENST00000393578 HERC1Q15751 4861 aa11.1□□□□□ -0.63
HMGA2-203ENST00000393578 MUC17Q685J3 4493 aa11.07□□□□□ -0.64
HMGA2-203ENST00000393578 KRTAP4-1Q9BYQ7 146 aa11.05□□□□□ -0.64
HMGA2-203ENST00000393578 HMCN2Q8NDA2 5059 aa11.02□□□□□ -0.65
HMGA2-203ENST00000393578 CDC42SE1Q9NRR8 79 aa11.01□□□□□ -0.65
HMGA2-203ENST00000393578 A8MU10 97 aa10.97□□□□□ -0.65
HMGA2-203ENST00000393578 UQCR11O14957 56 aa10.97□□□□□ -0.65
HMGA2-203ENST00000393578 SPATA8Q6RVD6 105 aa10.88□□□□□ -0.67
HMGA2-203ENST00000393578 CSAG1Q6PB30 78 aa10.87□□□□□ -0.67
HMGA2-203ENST00000393578 MIR22HGQ0VDD5 57 aa10.86□□□□□ -0.67
HMGA2-203ENST00000393578 A0A1B0GU33 70 aa10.85□□□□□ -0.67
HMGA2-203ENST00000393578 KRTAP19-2Q3LHN2 52 aa10.81□□□□□ -0.68
HMGA2-203ENST00000393578 KRTAP10-6P60371 365 aaPredicted RBP10.79□□□□□ -0.68
HMGA2-203ENST00000393578 KRTAP3-2Q9BYR7 98 aa10.78□□□□□ -0.68
HMGA2-203ENST00000393578 SVIPQ8NHG7 77 aa10.76□□□□□ -0.69
HMGA2-203ENST00000393578 MUC2Q02817 5179 aa10.72□□□□□ -0.69
HMGA2-203ENST00000393578 H0YAA0 97 aa10.72□□□□□ -0.69
HMGA2-203ENST00000393578 ADM2Q7Z4H4 148 aa10.69□□□□□ -0.7
HMGA2-203ENST00000393578 P0C880 135 aa10.66□□□□□ -0.7
HMGA2-203ENST00000393578 PMAIP1Q13794 54 aa10.64□□□□□ -0.71
HMGA2-203ENST00000393578 A6NN06 94 aa10.53□□□□□ -0.72
HMGA2-203ENST00000393578 KRTAP13-4Q3LI77 160 aa10.53□□□□□ -0.72
HMGA2-203ENST00000393578 FLGP20930 4061 aaPredicted RBP10.53□□□□□ -0.72
HMGA2-203ENST00000393578 LCE2CQ5TA81 110 aa10.46□□□□□ -0.74
HMGA2-203ENST00000393578 UBR4Q5T4S7 5183 aa10.45□□□□□ -0.74
HMGA2-203ENST00000393578 RNF213Q63HN8 5207 aa10.43□□□□□ -0.74
HMGA2-203ENST00000393578 M0QZ58 72 aa10.43□□□□□ -0.74
HMGA2-203ENST00000393578 A0A0D9SG42 100 aa10.36□□□□□ -0.75
HMGA2-203ENST00000393578 K7ERS5 55 aa10.33□□□□□ -0.76
HMGA2-203ENST00000393578 R4GN34 69 aa10.3□□□□□ -0.76
HMGA2-203ENST00000393578 KTN1-AS1Q86SY8 53 aa10.26□□□□□ -0.77
HMGA2-203ENST00000393578 LORP23490 312 aaPredicted RBP10.25□□□□□ -0.77
HMGA2-203ENST00000393578 FAT4Q6V0I7 4981 aa10.23□□□□□ -0.77
HMGA2-203ENST00000393578 MT1HP80294 61 aa10.23□□□□□ -0.77
HMGA2-203ENST00000393578 M0R2T5 61 aa10.17□□□□□ -0.78
HMGA2-203ENST00000393578 KRTAP12-1P59990 96 aa10.15□□□□□ -0.78
HMGA2-203ENST00000393578 KRTAP12-2P59991 146 aa10.14□□□□□ -0.79
HMGA2-203ENST00000393578 LINC01554Q52M75 96 aa10.12□□□□□ -0.79
HMGA2-203ENST00000393578 CRIPTQ9P021 101 aa10.1□□□□□ -0.79
HMGA2-203ENST00000393578 SPINT4Q6UDR6 99 aa10.09□□□□□ -0.79
HMGA2-203ENST00000393578 ROMO1P60602 79 aa9.94□□□□□ -0.82
HMGA2-203ENST00000393578 PRAC1Q96KF2 57 aa9.92□□□□□ -0.82
HMGA2-203ENST00000393578 KRTAP9-8Q9BYQ0 159 aa9.9□□□□□ -0.83
HMGA2-203ENST00000393578 MT2AP02795 61 aa9.88□□□□□ -0.83
HMGA2-203ENST00000393578 MT1FP04733 61 aa9.84□□□□□ -0.83
HMGA2-203ENST00000393578 SPRR2GQ9BYE4 73 aa9.84□□□□□ -0.83
HMGA2-203ENST00000393578 KRTAP10-10P60014 251 aa9.83□□□□□ -0.84
HMGA2-203ENST00000393578 KRTAP19-1Q8IUB9 90 aa9.77□□□□□ -0.84
HMGA2-203ENST00000393578 LCE2AQ5TA79 106 aaPredicted RBP9.67□□□□□ -0.86
HMGA2-203ENST00000393578 CAMK2N1Q7Z7J9 78 aa9.67□□□□□ -0.86
HMGA2-203ENST00000393578 KRTAP25-1Q3LHN0 102 aa9.64□□□□□ -0.87
HMGA2-203ENST00000393578 C10orf95Q9H7T3 257 aa9.59□□□□□ -0.87
HMGA2-203ENST00000393578 PLAC4Q8WY50 150 aa9.57□□□□□ -0.88
HMGA2-203ENST00000393578 KRTAP9-3Q9BYQ3 159 aa9.53□□□□□ -0.88
HMGA2-203ENST00000393578 KRTAP19-8Q3LI54 63 aa9.52□□□□□ -0.89
HMGA2-203ENST00000393578 MT1BP07438 61 aa9.37□□□□□ -0.91
HMGA2-203ENST00000393578 TNP1P09430 55 aa9.24□□□□□ -0.93
HMGA2-203ENST00000393578 LCE2BO14633 110 aa9.21□□□□□ -0.93
HMGA2-203ENST00000393578 MT1XP80297 61 aa9.13□□□□□ -0.95
HMGA2-203ENST00000393578 KRTAP10-5P60370 271 aa9.13□□□□□ -0.95
HMGA2-203ENST00000393578 PP632Q6XCG6 107 aa9.13□□□□□ -0.95
HMGA2-203ENST00000393578 KRTAP23-1A1A580 65 aa9.05□□□□□ -0.96
HMGA2-203ENST00000393578 PRO2289Q9P1D8 64 aa9.01□□□□□ -0.97
HMGA2-203ENST00000393578 USH2AO75445 5202 aa8.88□□□□□ -0.99
HMGA2-203ENST00000393578 LCE3AQ5TA76 89 aa8.8□□□□□ -1
HMGA2-203ENST00000393578 KRTAP10-7P60409 375 aaPredicted RBP8.78□□□□□ -1
HMGA2-203ENST00000393578 KRTAP10-12P60413 245 aa8.75□□□□□ -1.01
HMGA2-203ENST00000393578 LCE2DQ5TA82 110 aaPredicted RBP8.69□□□□□ -1.02
HMGA2-203ENST00000393578 KRTAP8-1Q8IUC2 63 aa8.64□□□□□ -1.03
HMGA2-203ENST00000393578 SSPOA2VEC9 5147 aa8.62□□□□□ -1.03
HMGA2-203ENST00000393578 KRTAP15-1Q3LI76 137 aa8.59□□□□□ -1.03
HMGA2-203ENST00000393578 KRTAP19-6Q3LI70 58 aa8.58□□□□□ -1.04
HMGA2-203ENST00000393578 KRTAP12-3P60328 96 aa8.45□□□□□ -1.06
HMGA2-203ENST00000393578 FSIP2Q5CZC0 6907 aa8.39□□□□□ -1.07
HMGA2-203ENST00000393578 KRTAP4-8A0A0G2JLE6 195 aa8.37□□□□□ -1.07
HMGA2-203ENST00000393578 KRTAP4-8Q9BYQ9 185 aa8.37□□□□□ -1.07
HMGA2-203ENST00000393578 KRTAP19-5Q3LI72 72 aa8.31□□□□□ -1.08
HMGA2-203ENST00000393578 KMT2DO14686 5537 aa8.3□□□□□ -1.08
HMGA2-203ENST00000393578 KRTAP9-2Q9BYQ4 174 aa8.26□□□□□ -1.09
HMGA2-203ENST00000393578 SPRR5A0A1B0GTR4 108 aa8.19□□□□□ -1.1
HMGA2-203ENST00000393578 FCGBPQ9Y6R7 5405 aaPredicted RBP8.17□□□□□ -1.1
HMGA2-203ENST00000393578 KRTAP19-7Q3SYF9 63 aa8.15□□□□□ -1.11
HMGA2-203ENST00000393578 LUZP6Q538Z0 58 aa8.04□□□□□ -1.12
HMGA2-203ENST00000393578 NDUFAF8A1L188 74 aa8.04□□□□□ -1.12
HMGA2-203ENST00000393578 CRCT1Q9UGL9 99 aa7.99□□□□□ -1.13
HMGA2-203ENST00000393578 MT1EP04732 61 aa7.98□□□□□ -1.13
HMGA2-203ENST00000393578 LCE3CQ5T5A8 94 aa7.92□□□□□ -1.14
HMGA2-203ENST00000393578 KRTAP19-4Q3LI73 84 aa7.88□□□□□ -1.15
HMGA2-203ENST00000393578 MT1LQ93083 61 aa7.86□□□□□ -1.15
HMGA2-203ENST00000393578 MACF1Q9UPN3 7388 aaKnown RBP7.72□□□□□ -1.17
HMGA2-203ENST00000393578 SPRR2FQ96RM1 72 aa7.66□□□□□ -1.18
HMGA2-203ENST00000393578 KRTAP4-7Q9BYR0 210 aa7.66□□□□□ -1.18
HMGA2-203ENST00000393578 KRTAP19-3Q7Z4W3 81 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms