RNA–Protein interactions for RNA: ENST00000392343.3

CCDC57-203, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC57, Length 2,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-203ENST00000392343 HSPG2P98160 4391 aa7.26□□□□□ -1.25
CCDC57-203ENST00000392343 MYCBP2O75592 4640 aa7.25□□□□□ -1.25
CCDC57-203ENST00000392343 KRTAP13-4Q3LI77 160 aa7.25□□□□□ -1.25
CCDC57-203ENST00000392343 KRTAP10-6P60371 365 aaPredicted RBP7.22□□□□□ -1.25
CCDC57-203ENST00000392343 KRTAP3-3Q9BYR6 98 aa7.21□□□□□ -1.26
CCDC57-203ENST00000392343 FAT3Q8TDW7 4589 aa7.2□□□□□ -1.26
CCDC57-203ENST00000392343 RPL37P61927 97 aaKnown RBP7.18□□□□□ -1.26
CCDC57-203ENST00000392343 KRTAP10-8P60410 259 aa7.18□□□□□ -1.26
CCDC57-203ENST00000392343 KRTAP3-2Q9BYR7 98 aa7.14□□□□□ -1.27
CCDC57-203ENST00000392343 C10orf95Q9H7T3 257 aa7.14□□□□□ -1.27
CCDC57-203ENST00000392343 A0A1B0GVY2 172 aa7.14□□□□□ -1.27
CCDC57-203ENST00000392343 P0C880 135 aa7.13□□□□□ -1.27
CCDC57-203ENST00000392343 TPRXLQ17RH7 258 aa7.12□□□□□ -1.27
CCDC57-203ENST00000392343 TNXBP22105 4242 aa7.1□□□□□ -1.27
CCDC57-203ENST00000392343 S4R3F8 94 aa7.1□□□□□ -1.27
CCDC57-203ENST00000392343 KMT2CQ8NEZ4 4911 aaKnown RBP7.1□□□□□ -1.27
CCDC57-203ENST00000392343 SPINT4Q6UDR6 99 aa7.06□□□□□ -1.28
CCDC57-203ENST00000392343 LPAP08519 4548 aa7.06□□□□□ -1.28
CCDC57-203ENST00000392343 J3QL48 77 aa7.06□□□□□ -1.28
CCDC57-203ENST00000392343 RYR2Q92736 4967 aa7.05□□□□□ -1.28
CCDC57-203ENST00000392343 XP32Q5T750 250 aa7.04□□□□□ -1.28
CCDC57-203ENST00000392343 KRTAP12-2P59991 146 aa7.02□□□□□ -1.28
CCDC57-203ENST00000392343 Q5VSD8 79 aa6.93□□□□□ -1.3
CCDC57-203ENST00000392343 LRP2P98164 4655 aa6.92□□□□□ -1.3
CCDC57-203ENST00000392343 KRTAP12-1P59990 96 aa6.9□□□□□ -1.3
CCDC57-203ENST00000392343 RYR3Q15413 4870 aa6.9□□□□□ -1.3
CCDC57-203ENST00000392343 KRTAP17-1Q9BYP8 105 aa6.87□□□□□ -1.31
CCDC57-203ENST00000392343 NDUFAF8A1L188 74 aa6.84□□□□□ -1.31
CCDC57-203ENST00000392343 KRTAP15-1Q3LI76 137 aa6.82□□□□□ -1.32
CCDC57-203ENST00000392343 KIAA1109Q2LD37 5005 aa6.81□□□□□ -1.32
CCDC57-203ENST00000392343 RYR1P21817 5038 aa6.79□□□□□ -1.32
CCDC57-203ENST00000392343 MT1HL1P0DM35 61 aa6.75□□□□□ -1.33
CCDC57-203ENST00000392343 M0QZ58 72 aa6.72□□□□□ -1.33
CCDC57-203ENST00000392343 ABCA13Q86UQ4 5058 aa6.71□□□□□ -1.33
CCDC57-203ENST00000392343 EPPK1P58107 5090 aaKnown RBP6.67□□□□□ -1.34
CCDC57-203ENST00000392343 R4GN34 69 aa6.65□□□□□ -1.35
CCDC57-203ENST00000392343 SEC61BP60468 96 aaKnown RBP6.62□□□□□ -1.35
CCDC57-203ENST00000392343 LORP23490 312 aaPredicted RBP6.62□□□□□ -1.35
CCDC57-203ENST00000392343 MUC17Q685J3 4493 aa6.48□□□□□ -1.37
CCDC57-203ENST00000392343 KRTAP4-5Q9BYR2 181 aa6.47□□□□□ -1.37
CCDC57-203ENST00000392343 PLAC4Q8WY50 150 aa6.46□□□□□ -1.38
CCDC57-203ENST00000392343 KRTAP4-1Q9BYQ7 146 aa6.43□□□□□ -1.38
CCDC57-203ENST00000392343 MUC2Q02817 5179 aa6.43□□□□□ -1.38
CCDC57-203ENST00000392343 LUZP6Q538Z0 58 aa6.37□□□□□ -1.39
CCDC57-203ENST00000392343 CAMK2N1Q7Z7J9 78 aa6.36□□□□□ -1.39
CCDC57-203ENST00000392343 HERC2O95714 4834 aa6.27□□□□□ -1.41
CCDC57-203ENST00000392343 BIRC6Q9NR09 4857 aa6.24□□□□□ -1.41
CCDC57-203ENST00000392343 KRTAP19-2Q3LHN2 52 aa6.23□□□□□ -1.41
CCDC57-203ENST00000392343 PP632Q6XCG6 107 aa6.17□□□□□ -1.42
CCDC57-203ENST00000392343 PCLOQ9Y6V0 5065 aa6.15□□□□□ -1.43
CCDC57-203ENST00000392343 FLGP20930 4061 aaPredicted RBP6.1□□□□□ -1.43
CCDC57-203ENST00000392343 FAT4Q6V0I7 4981 aa6.07□□□□□ -1.44
CCDC57-203ENST00000392343 TNP1P09430 55 aa6.07□□□□□ -1.44
CCDC57-203ENST00000392343 HERC1Q15751 4861 aa6.01□□□□□ -1.45
CCDC57-203ENST00000392343 HMCN2Q8NDA2 5059 aa5.86□□□□□ -1.47
CCDC57-203ENST00000392343 SPRR5A0A1B0GTR4 108 aa5.85□□□□□ -1.47
CCDC57-203ENST00000392343 RNF213Q63HN8 5207 aa5.85□□□□□ -1.47
CCDC57-203ENST00000392343 KRTAP23-1A1A580 65 aa5.83□□□□□ -1.48
CCDC57-203ENST00000392343 KRTAP19-1Q8IUB9 90 aa5.81□□□□□ -1.48
CCDC57-203ENST00000392343 M0R2T5 61 aa5.81□□□□□ -1.48
CCDC57-203ENST00000392343 LCE3AQ5TA76 89 aa5.8□□□□□ -1.48
CCDC57-203ENST00000392343 LCE2CQ5TA81 110 aa5.8□□□□□ -1.48
CCDC57-203ENST00000392343 SPRR2GQ9BYE4 73 aa5.77□□□□□ -1.49
CCDC57-203ENST00000392343 UBR4Q5T4S7 5183 aa5.72□□□□□ -1.49
CCDC57-203ENST00000392343 KRTAP10-10P60014 251 aa5.68□□□□□ -1.5
CCDC57-203ENST00000392343 MT1FP04733 61 aa5.65□□□□□ -1.5
CCDC57-203ENST00000392343 MT1HP80294 61 aa5.63□□□□□ -1.51
CCDC57-203ENST00000392343 MT2AP02795 61 aa5.61□□□□□ -1.51
CCDC57-203ENST00000392343 KRTAP9-8Q9BYQ0 159 aa5.53□□□□□ -1.52
CCDC57-203ENST00000392343 KRTAP8-1Q8IUC2 63 aa5.52□□□□□ -1.53
CCDC57-203ENST00000392343 KRTAP10-5P60370 271 aa5.51□□□□□ -1.53
CCDC57-203ENST00000392343 MT1XP80297 61 aa5.49□□□□□ -1.53
CCDC57-203ENST00000392343 MT1BP07438 61 aa5.47□□□□□ -1.53
CCDC57-203ENST00000392343 KRTAP12-3P60328 96 aa5.46□□□□□ -1.53
CCDC57-203ENST00000392343 KRTAP19-8Q3LI54 63 aa5.45□□□□□ -1.54
CCDC57-203ENST00000392343 KRTAP10-12P60413 245 aa5.44□□□□□ -1.54
CCDC57-203ENST00000392343 KRTAP10-7P60409 375 aaPredicted RBP5.43□□□□□ -1.54
CCDC57-203ENST00000392343 PRO2289Q9P1D8 64 aa5.38□□□□□ -1.55
CCDC57-203ENST00000392343 KMT2DO14686 5537 aa5.36□□□□□ -1.55
CCDC57-203ENST00000392343 USH2AO75445 5202 aa5.33□□□□□ -1.56
CCDC57-203ENST00000392343 INE1O15225 51 aa5.28□□□□□ -1.56
CCDC57-203ENST00000392343 KRTAP9-3Q9BYQ3 159 aa5.27□□□□□ -1.57
CCDC57-203ENST00000392343 KRTAP19-5Q3LI72 72 aa5.21□□□□□ -1.58
CCDC57-203ENST00000392343 LCE3CQ5T5A8 94 aa5.14□□□□□ -1.59
CCDC57-203ENST00000392343 KRTAP4-8A0A0G2JLE6 195 aa5.12□□□□□ -1.59
CCDC57-203ENST00000392343 KRTAP4-8Q9BYQ9 185 aa5.12□□□□□ -1.59
CCDC57-203ENST00000392343 LCE2BO14633 110 aa5.1□□□□□ -1.59
CCDC57-203ENST00000392343 KRTAP9-6A8MVA2 160 aa5.06□□□□□ -1.6
CCDC57-203ENST00000392343 LCE2AQ5TA79 106 aaPredicted RBP5.04□□□□□ -1.6
CCDC57-203ENST00000392343 KRTAP4-7Q9BYR0 210 aa5.03□□□□□ -1.6
CCDC57-203ENST00000392343 FSIP2Q5CZC0 6907 aa4.93□□□□□ -1.62
CCDC57-203ENST00000392343 KRTAP19-7Q3SYF9 63 aa4.89□□□□□ -1.63
CCDC57-203ENST00000392343 KRTAP2-3P0C7H8 128 aa4.82□□□□□ -1.64
CCDC57-203ENST00000392343 KRTAP2-4Q9BYR9 128 aa4.82□□□□□ -1.64
CCDC57-203ENST00000392343 KRTAP2-1Q9BYU5 128 aa4.82□□□□□ -1.64
CCDC57-203ENST00000392343 MT1LQ93083 61 aa4.75□□□□□ -1.65
CCDC57-203ENST00000392343 LCE2DQ5TA82 110 aaPredicted RBP4.71□□□□□ -1.66
CCDC57-203ENST00000392343 MT1EP04732 61 aa4.71□□□□□ -1.66
CCDC57-203ENST00000392343 SSPOA2VEC9 5147 aa4.67□□□□□ -1.66
CCDC57-203ENST00000392343 LOC100996750A0A140TA64 210 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms