RNA–Protein interactions for RNA: ENST00000391089.1

SNORA48.4-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 134 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.4-201ENST00000391089 TPRXLQ17RH7 258 aa2.85□□□□□ -1.95
SNORA48.4-201ENST00000391089 KTN1-AS1Q86SY8 53 aa2.85□□□□□ -1.95
SNORA48.4-201ENST00000391089 LRP1Q07954 4544 aaKnown RBP2.84□□□□□ -1.95
SNORA48.4-201ENST00000391089 MIR22HGQ0VDD5 57 aa2.84□□□□□ -1.95
SNORA48.4-201ENST00000391089 XP32Q5T750 250 aa2.84□□□□□ -1.95
SNORA48.4-201ENST00000391089 RBM12B-AS1Q9P1G2 102 aa2.83□□□□□ -1.96
SNORA48.4-201ENST00000391089 A6NN06 94 aa2.82□□□□□ -1.96
SNORA48.4-201ENST00000391089 RNF213Q63HN8 5207 aa2.82□□□□□ -1.96
SNORA48.4-201ENST00000391089 C9orf92A6NGG3 77 aa2.8□□□□□ -1.96
SNORA48.4-201ENST00000391089 K7ERS5 55 aa2.8□□□□□ -1.96
SNORA48.4-201ENST00000391089 RETNLBQ9BQ08 111 aa2.8□□□□□ -1.96
SNORA48.4-201ENST00000391089 A0A1B0GU33 70 aa2.79□□□□□ -1.96
SNORA48.4-201ENST00000391089 H0YAA0 97 aa2.78□□□□□ -1.96
SNORA48.4-201ENST00000391089 MT1HL1P0DM35 61 aa2.78□□□□□ -1.96
SNORA48.4-201ENST00000391089 KRTAP3-1Q9BYR8 98 aa2.78□□□□□ -1.96
SNORA48.4-201ENST00000391089 LRP2P98164 4655 aa2.77□□□□□ -1.97
SNORA48.4-201ENST00000391089 TNXBP22105 4242 aa2.76□□□□□ -1.97
SNORA48.4-201ENST00000391089 SEC61BP60468 96 aaKnown RBP2.76□□□□□ -1.97
SNORA48.4-201ENST00000391089 H1FX-AS1Q4G0G2 97 aa2.76□□□□□ -1.97
SNORA48.4-201ENST00000391089 S4R3F8 94 aa2.74□□□□□ -1.97
SNORA48.4-201ENST00000391089 M0QZ58 72 aa2.73□□□□□ -1.97
SNORA48.4-201ENST00000391089 CSAG1Q6PB30 78 aa2.73□□□□□ -1.97
SNORA48.4-201ENST00000391089 MUC2Q02817 5179 aa2.69□□□□□ -1.98
SNORA48.4-201ENST00000391089 A8MU10 97 aa2.69□□□□□ -1.98
SNORA48.4-201ENST00000391089 KRTAP3-3Q9BYR6 98 aa2.69□□□□□ -1.98
SNORA48.4-201ENST00000391089 LPAP08519 4548 aa2.69□□□□□ -1.98
SNORA48.4-201ENST00000391089 KRTAP10-6P60371 365 aaPredicted RBP2.66□□□□□ -1.98
SNORA48.4-201ENST00000391089 KRTAP3-2Q9BYR7 98 aa2.64□□□□□ -1.99
SNORA48.4-201ENST00000391089 CRIPTQ9P021 101 aa2.63□□□□□ -1.99
SNORA48.4-201ENST00000391089 ROMO1P60602 79 aa2.62□□□□□ -1.99
SNORA48.4-201ENST00000391089 LINC01554Q52M75 96 aa2.61□□□□□ -1.99
SNORA48.4-201ENST00000391089 FAT4Q6V0I7 4981 aa2.59□□□□□ -1.99
SNORA48.4-201ENST00000391089 ADM2Q7Z4H4 148 aa2.59□□□□□ -1.99
SNORA48.4-201ENST00000391089 KRTAP25-1Q3LHN0 102 aa2.58□□□□□ -2
SNORA48.4-201ENST00000391089 KRTAP9-2Q9BYQ4 174 aa2.57□□□□□ -2
SNORA48.4-201ENST00000391089 R4GN34 69 aa2.56□□□□□ -2
SNORA48.4-201ENST00000391089 P0C880 135 aa2.55□□□□□ -2
SNORA48.4-201ENST00000391089 KRTAP9-6A0A140TA67 174 aa2.54□□□□□ -2
SNORA48.4-201ENST00000391089 MUC17Q685J3 4493 aa2.53□□□□□ -2
SNORA48.4-201ENST00000391089 KRTAP13-4Q3LI77 160 aa2.53□□□□□ -2
SNORA48.4-201ENST00000391089 KRTAP12-1P59990 96 aa2.52□□□□□ -2.01
SNORA48.4-201ENST00000391089 KRTAP23-1A1A580 65 aa2.51□□□□□ -2.01
SNORA48.4-201ENST00000391089 PP632Q6XCG6 107 aa2.51□□□□□ -2.01
SNORA48.4-201ENST00000391089 PRAC1Q96KF2 57 aa2.51□□□□□ -2.01
SNORA48.4-201ENST00000391089 KRTAP19-2Q3LHN2 52 aa2.5□□□□□ -2.01
SNORA48.4-201ENST00000391089 A0A0D9SG42 100 aa2.49□□□□□ -2.01
SNORA48.4-201ENST00000391089 FSIP2Q5CZC0 6907 aa2.48□□□□□ -2.01
SNORA48.4-201ENST00000391089 H3BS24 57 aa2.47□□□□□ -2.01
SNORA48.4-201ENST00000391089 KRTAP12-2P59991 146 aa2.47□□□□□ -2.01
SNORA48.4-201ENST00000391089 SPINT4Q6UDR6 99 aa2.47□□□□□ -2.01
SNORA48.4-201ENST00000391089 LCE2AQ5TA79 106 aaPredicted RBP2.46□□□□□ -2.02
SNORA48.4-201ENST00000391089 KRTAP4-1Q9BYQ7 146 aa2.44□□□□□ -2.02
SNORA48.4-201ENST00000391089 FLGP20930 4061 aaPredicted RBP2.43□□□□□ -2.02
SNORA48.4-201ENST00000391089 A0A0A0MQY5 61 aa2.43□□□□□ -2.02
SNORA48.4-201ENST00000391089 CRCT1Q9UGL9 99 aa2.42□□□□□ -2.02
SNORA48.4-201ENST00000391089 SPRR2GQ9BYE4 73 aa2.41□□□□□ -2.02
SNORA48.4-201ENST00000391089 CAMK2N1Q7Z7J9 78 aa2.4□□□□□ -2.03
SNORA48.4-201ENST00000391089 LCE2DQ5TA82 110 aaPredicted RBP2.39□□□□□ -2.03
SNORA48.4-201ENST00000391089 TNP1P09430 55 aa2.38□□□□□ -2.03
SNORA48.4-201ENST00000391089 PLAC4Q8WY50 150 aa2.37□□□□□ -2.03
SNORA48.4-201ENST00000391089 LCE2CQ5TA81 110 aa2.36□□□□□ -2.03
SNORA48.4-201ENST00000391089 C10orf95Q9H7T3 257 aa2.35□□□□□ -2.03
SNORA48.4-201ENST00000391089 M0R2T5 61 aa2.32□□□□□ -2.04
SNORA48.4-201ENST00000391089 LORP23490 312 aaPredicted RBP2.32□□□□□ -2.04
SNORA48.4-201ENST00000391089 MT1HP80294 61 aa2.32□□□□□ -2.04
SNORA48.4-201ENST00000391089 KRTAP19-8Q3LI54 63 aa2.31□□□□□ -2.04
SNORA48.4-201ENST00000391089 KRTAP15-1Q3LI76 137 aa2.31□□□□□ -2.04
SNORA48.4-201ENST00000391089 USH2AO75445 5202 aa2.29□□□□□ -2.04
SNORA48.4-201ENST00000391089 KRTAP19-1Q8IUB9 90 aa2.29□□□□□ -2.04
SNORA48.4-201ENST00000391089 KRTAP9-7A8MTY7 169 aa2.27□□□□□ -2.05
SNORA48.4-201ENST00000391089 KRTAP10-10P60014 251 aa2.27□□□□□ -2.05
SNORA48.4-201ENST00000391089 KRTAP19-4Q3LI73 84 aa2.27□□□□□ -2.05
SNORA48.4-201ENST00000391089 KRTAP9-8Q9BYQ0 159 aa2.27□□□□□ -2.05
SNORA48.4-201ENST00000391089 PRO2289Q9P1D8 64 aa2.27□□□□□ -2.05
SNORA48.4-201ENST00000391089 LUZP6Q538Z0 58 aa2.26□□□□□ -2.05
SNORA48.4-201ENST00000391089 SSPOA2VEC9 5147 aa2.25□□□□□ -2.05
SNORA48.4-201ENST00000391089 MT2AP02795 61 aa2.25□□□□□ -2.05
SNORA48.4-201ENST00000391089 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.24□□□□□ -2.05
SNORA48.4-201ENST00000391089 MT1FP04733 61 aa2.21□□□□□ -2.06
SNORA48.4-201ENST00000391089 SPRR5A0A1B0GTR4 108 aa2.2□□□□□ -2.06
SNORA48.4-201ENST00000391089 KRTAP8-1Q8IUC2 63 aa2.2□□□□□ -2.06
SNORA48.4-201ENST00000391089 FCGBPQ9Y6R7 5405 aaPredicted RBP2.2□□□□□ -2.06
SNORA48.4-201ENST00000391089 MACF1Q9UPN3 7388 aaKnown RBP2.19□□□□□ -2.06
SNORA48.4-201ENST00000391089 KRTAP9-3Q9BYQ3 159 aa2.19□□□□□ -2.06
SNORA48.4-201ENST00000391089 SYNE2Q8WXH0 6885 aaKnown RBP2.18□□□□□ -2.06
SNORA48.4-201ENST00000391089 MT1BP07438 61 aa2.16□□□□□ -2.06
SNORA48.4-201ENST00000391089 NDUFAF8A1L188 74 aa2.14□□□□□ -2.07
SNORA48.4-201ENST00000391089 KRTAP10-5P60370 271 aa2.14□□□□□ -2.07
SNORA48.4-201ENST00000391089 MT1XP80297 61 aa2.14□□□□□ -2.07
SNORA48.4-201ENST00000391089 KRTAP10-12P60413 245 aa2.12□□□□□ -2.07
SNORA48.4-201ENST00000391089 MUC12Q9UKN1 5478 aa2.1□□□□□ -2.07
SNORA48.4-201ENST00000391089 KRTAP12-3P60328 96 aa2.09□□□□□ -2.07
SNORA48.4-201ENST00000391089 LCE3AQ5TA76 89 aa2.09□□□□□ -2.07
SNORA48.4-201ENST00000391089 LCE2BO14633 110 aa2.06□□□□□ -2.08
SNORA48.4-201ENST00000391089 KRTAP6-3Q3LI67 103 aa2.04□□□□□ -2.08
SNORA48.4-201ENST00000391089 KRTAP19-6Q3LI70 58 aa2.04□□□□□ -2.08
SNORA48.4-201ENST00000391089 NEBP20929 6669 aa2.03□□□□□ -2.08
SNORA48.4-201ENST00000391089 MDN1Q9NU22 5596 aa2.01□□□□□ -2.09
SNORA48.4-201ENST00000391089 KRTAP10-7P60409 375 aaPredicted RBP2□□□□□ -2.09
SNORA48.4-201ENST00000391089 KRTAP20-1Q3LI63 56 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms