RNA–Protein interactions for RNA: ENST00000380962.9

LCMT1-201, Transcript of leucine carboxyl methyltransferase 1, humanhuman

TSL 2

Gene LCMT1, Length 1,529 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT1-201ENST00000380962 MT1HL1P0DM35 61 aa7.04□□□□□ -1.28
LCMT1-201ENST00000380962 KRTAP3-1Q9BYR8 98 aa7.04□□□□□ -1.28
LCMT1-201ENST00000380962 RBM12B-AS1Q9P1G2 102 aa7.04□□□□□ -1.28
LCMT1-201ENST00000380962 UQCR11O14957 56 aa7.03□□□□□ -1.28
LCMT1-201ENST00000380962 SPATA8Q6RVD6 105 aa7.02□□□□□ -1.29
LCMT1-201ENST00000380962 A6NN06 94 aa7.01□□□□□ -1.29
LCMT1-201ENST00000380962 XP32Q5T750 250 aa7.01□□□□□ -1.29
LCMT1-201ENST00000380962 DMBT1Q9UGM3 2413 aaPredicted RBP7□□□□□ -1.29
LCMT1-201ENST00000380962 MIR22HGQ0VDD5 57 aa6.96□□□□□ -1.29
LCMT1-201ENST00000380962 TPRXLQ17RH7 258 aa6.91□□□□□ -1.3
LCMT1-201ENST00000380962 UBR4Q5T4S7 5183 aa6.88□□□□□ -1.31
LCMT1-201ENST00000380962 J3QL48 77 aa6.84□□□□□ -1.31
LCMT1-201ENST00000380962 MYCBP2O75592 4640 aa6.83□□□□□ -1.32
LCMT1-201ENST00000380962 A0A1B0GU33 70 aa6.82□□□□□ -1.32
LCMT1-201ENST00000380962 H1FX-AS1Q4G0G2 97 aa6.81□□□□□ -1.32
LCMT1-201ENST00000380962 S4R3F8 94 aa6.79□□□□□ -1.32
LCMT1-201ENST00000380962 KRTAP3-3Q9BYR6 98 aa6.78□□□□□ -1.32
LCMT1-201ENST00000380962 H0YAA0 97 aa6.76□□□□□ -1.33
LCMT1-201ENST00000380962 LINC01554Q52M75 96 aa6.71□□□□□ -1.33
LCMT1-201ENST00000380962 HMCN2Q8NDA2 5059 aa6.71□□□□□ -1.34
LCMT1-201ENST00000380962 KRTAP10-6P60371 365 aaPredicted RBP6.67□□□□□ -1.34
LCMT1-201ENST00000380962 SEC61BP60468 96 aaKnown RBP6.66□□□□□ -1.34
LCMT1-201ENST00000380962 KRTAP3-2Q9BYR7 98 aa6.65□□□□□ -1.35
LCMT1-201ENST00000380962 K7ERS5 55 aa6.62□□□□□ -1.35
LCMT1-201ENST00000380962 LRP2P98164 4655 aa6.61□□□□□ -1.35
LCMT1-201ENST00000380962 CSAG1Q6PB30 78 aa6.6□□□□□ -1.35
LCMT1-201ENST00000380962 RNF213Q63HN8 5207 aa6.55□□□□□ -1.36
LCMT1-201ENST00000380962 H3BS24 57 aa6.52□□□□□ -1.37
LCMT1-201ENST00000380962 P0C880 135 aa6.51□□□□□ -1.37
LCMT1-201ENST00000380962 ADM2Q7Z4H4 148 aa6.51□□□□□ -1.37
LCMT1-201ENST00000380962 KRTAP13-4Q3LI77 160 aa6.5□□□□□ -1.37
LCMT1-201ENST00000380962 PRAC1Q96KF2 57 aa6.5□□□□□ -1.37
LCMT1-201ENST00000380962 LPAP08519 4548 aa6.48□□□□□ -1.37
LCMT1-201ENST00000380962 M0QZ58 72 aa6.48□□□□□ -1.37
LCMT1-201ENST00000380962 MUC17Q685J3 4493 aa6.44□□□□□ -1.38
LCMT1-201ENST00000380962 KRTAP4-1Q9BYQ7 146 aa6.4□□□□□ -1.38
LCMT1-201ENST00000380962 A0A0D9SG42 100 aa6.4□□□□□ -1.39
LCMT1-201ENST00000380962 ROMO1P60602 79 aa6.38□□□□□ -1.39
LCMT1-201ENST00000380962 KRTAP19-2Q3LHN2 52 aa6.35□□□□□ -1.39
LCMT1-201ENST00000380962 KRTAP25-1Q3LHN0 102 aa6.34□□□□□ -1.39
LCMT1-201ENST00000380962 KRTAP12-1P59990 96 aa6.31□□□□□ -1.4
LCMT1-201ENST00000380962 KRTAP12-2P59991 146 aa6.29□□□□□ -1.4
LCMT1-201ENST00000380962 KRTAP9-2Q9BYQ4 174 aa6.26□□□□□ -1.41
LCMT1-201ENST00000380962 R4GN34 69 aa6.26□□□□□ -1.41
LCMT1-201ENST00000380962 SPINT4Q6UDR6 99 aa6.24□□□□□ -1.41
LCMT1-201ENST00000380962 KRTAP9-6A0A140TA67 174 aa6.2□□□□□ -1.42
LCMT1-201ENST00000380962 FLGP20930 4061 aaPredicted RBP6.19□□□□□ -1.42
LCMT1-201ENST00000380962 CRIPTQ9P021 101 aa6.14□□□□□ -1.43
LCMT1-201ENST00000380962 MUC2Q02817 5179 aa6.13□□□□□ -1.43
LCMT1-201ENST00000380962 LORP23490 312 aaPredicted RBP6.11□□□□□ -1.43
LCMT1-201ENST00000380962 FAT4Q6V0I7 4981 aa6.1□□□□□ -1.43
LCMT1-201ENST00000380962 LCE2CQ5TA81 110 aa6.03□□□□□ -1.44
LCMT1-201ENST00000380962 LCE2AQ5TA79 106 aaPredicted RBP6.02□□□□□ -1.45
LCMT1-201ENST00000380962 C10orf95Q9H7T3 257 aa5.98□□□□□ -1.45
LCMT1-201ENST00000380962 CAMK2N1Q7Z7J9 78 aa5.91□□□□□ -1.46
LCMT1-201ENST00000380962 MT1HP80294 61 aa5.88□□□□□ -1.47
LCMT1-201ENST00000380962 SPRR2GQ9BYE4 73 aa5.88□□□□□ -1.47
LCMT1-201ENST00000380962 FSIP2Q5CZC0 6907 aa5.86□□□□□ -1.47
LCMT1-201ENST00000380962 CRCT1Q9UGL9 99 aa5.86□□□□□ -1.47
LCMT1-201ENST00000380962 LCE2DQ5TA82 110 aaPredicted RBP5.84□□□□□ -1.47
LCMT1-201ENST00000380962 M0R2T5 61 aa5.84□□□□□ -1.48
LCMT1-201ENST00000380962 PP632Q6XCG6 107 aa5.84□□□□□ -1.48
LCMT1-201ENST00000380962 KRTAP15-1Q3LI76 137 aa5.79□□□□□ -1.48
LCMT1-201ENST00000380962 KRTAP19-1Q8IUB9 90 aa5.78□□□□□ -1.48
LCMT1-201ENST00000380962 KRTAP23-1A1A580 65 aa5.76□□□□□ -1.49
LCMT1-201ENST00000380962 MT2AP02795 61 aa5.74□□□□□ -1.49
LCMT1-201ENST00000380962 PLAC4Q8WY50 150 aa5.74□□□□□ -1.49
LCMT1-201ENST00000380962 TNP1P09430 55 aa5.73□□□□□ -1.49
LCMT1-201ENST00000380962 KRTAP9-8Q9BYQ0 159 aa5.73□□□□□ -1.49
LCMT1-201ENST00000380962 MT1FP04733 61 aa5.71□□□□□ -1.5
LCMT1-201ENST00000380962 KRTAP10-10P60014 251 aa5.7□□□□□ -1.5
LCMT1-201ENST00000380962 NDUFAF8A1L188 74 aa5.69□□□□□ -1.5
LCMT1-201ENST00000380962 KRTAP19-8Q3LI54 63 aa5.67□□□□□ -1.5
LCMT1-201ENST00000380962 A0A0A0MQY5 61 aa5.56□□□□□ -1.52
LCMT1-201ENST00000380962 KRTAP9-7A8MTY7 169 aa5.52□□□□□ -1.53
LCMT1-201ENST00000380962 MT1BP07438 61 aa5.51□□□□□ -1.53
LCMT1-201ENST00000380962 KRTAP9-3Q9BYQ3 159 aa5.51□□□□□ -1.53
LCMT1-201ENST00000380962 LUZP6Q538Z0 58 aa5.48□□□□□ -1.53
LCMT1-201ENST00000380962 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.46□□□□□ -1.54
LCMT1-201ENST00000380962 KRTAP10-5P60370 271 aa5.42□□□□□ -1.54
LCMT1-201ENST00000380962 MT1XP80297 61 aa5.42□□□□□ -1.54
LCMT1-201ENST00000380962 LCE3AQ5TA76 89 aa5.36□□□□□ -1.55
LCMT1-201ENST00000380962 PRO2289Q9P1D8 64 aa5.36□□□□□ -1.55
LCMT1-201ENST00000380962 KRTAP8-1Q8IUC2 63 aa5.34□□□□□ -1.55
LCMT1-201ENST00000380962 SPRR5A0A1B0GTR4 108 aa5.32□□□□□ -1.56
LCMT1-201ENST00000380962 USH2AO75445 5202 aa5.3□□□□□ -1.56
LCMT1-201ENST00000380962 KRTAP10-12P60413 245 aa5.28□□□□□ -1.56
LCMT1-201ENST00000380962 SSPOA2VEC9 5147 aa5.28□□□□□ -1.56
LCMT1-201ENST00000380962 LCE2BO14633 110 aa5.26□□□□□ -1.57
LCMT1-201ENST00000380962 FCGBPQ9Y6R7 5405 aaPredicted RBP5.24□□□□□ -1.57
LCMT1-201ENST00000380962 SYNE2Q8WXH0 6885 aaKnown RBP5.21□□□□□ -1.58
LCMT1-201ENST00000380962 KRTAP10-7P60409 375 aaPredicted RBP5.19□□□□□ -1.58
LCMT1-201ENST00000380962 KRTAP12-3P60328 96 aa5.16□□□□□ -1.58
LCMT1-201ENST00000380962 MACF1Q9UPN3 7388 aaKnown RBP5.15□□□□□ -1.59
LCMT1-201ENST00000380962 KRTAP6-3Q3LI67 103 aa4.98□□□□□ -1.61
LCMT1-201ENST00000380962 KRTAP19-5Q3LI72 72 aa4.97□□□□□ -1.61
LCMT1-201ENST00000380962 KRTAP19-6Q3LI70 58 aa4.95□□□□□ -1.62
LCMT1-201ENST00000380962 INE1O15225 51 aa4.93□□□□□ -1.62
LCMT1-201ENST00000380962 KRTAP19-4Q3LI73 84 aa4.93□□□□□ -1.62
LCMT1-201ENST00000380962 NEBP20929 6669 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms